RNA–Protein interactions for RNA: ENST00000393560.5

LAMB1-203, Transcript of laminin subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene LAMB1, Length 2,806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-203ENST00000393560 HIPK4Q8NE63 616 aa11.69□□□□□ -0.54
LAMB1-203ENST00000393560 NEDD1Q8NHV4 660 aa11.69□□□□□ -0.54
LAMB1-203ENST00000393560 FBXO27Q8NI29 283 aa11.69□□□□□ -0.54
LAMB1-203ENST00000393560 WASF1Q92558 559 aa11.69□□□□□ -0.54
LAMB1-203ENST00000393560 ANKS1AQ92625 1134 aa11.69□□□□□ -0.54
LAMB1-203ENST00000393560 FBXW5Q969U6 566 aa11.69□□□□□ -0.54
LAMB1-203ENST00000393560 DCUN1D1Q96GG9 259 aa11.69□□□□□ -0.54
LAMB1-203ENST00000393560 NACC1Q96RE7 527 aa11.69□□□□□ -0.54
LAMB1-203ENST00000393560 TUBB6Q9BUF5 446 aa11.69□□□□□ -0.54
LAMB1-203ENST00000393560 C9orf16Q9BUW7 83 aa11.69□□□□□ -0.54
LAMB1-203ENST00000393560 MLPHQ9BV36 600 aaPredicted RBP11.69□□□□□ -0.54
LAMB1-203ENST00000393560 RMND5AQ9H871 391 aa11.69□□□□□ -0.54
LAMB1-203ENST00000393560 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.69□□□□□ -0.54
LAMB1-203ENST00000393560 DDX28Q9NUL7 540 aaKnown RBP11.69□□□□□ -0.54
LAMB1-203ENST00000393560 SRP68Q9UHB9 627 aaKnown RBP11.69□□□□□ -0.54
LAMB1-203ENST00000393560 POTEB3A0JP26 581 aa11.69□□□□□ -0.54
LAMB1-203ENST00000393560 SH3D21A4FU49 640 aa11.69□□□□□ -0.54
LAMB1-203ENST00000393560 ZNF839A8K0R7 811 aa11.69□□□□□ -0.54
LAMB1-203ENST00000393560 AURKAO14965 403 aa11.69□□□□□ -0.54
LAMB1-203ENST00000393560 BET1O15155 118 aa11.69□□□□□ -0.54
LAMB1-203ENST00000393560 NUPL2O15504 423 aaKnown RBP11.69□□□□□ -0.54
LAMB1-203ENST00000393560 MAGEC1O60732 1142 aa11.69□□□□□ -0.54
LAMB1-203ENST00000393560 GLAP06280 429 aa11.69□□□□□ -0.54
LAMB1-203ENST00000393560 POLR2MP0CAP2 368 aa11.69□□□□□ -0.54
LAMB1-203ENST00000393560 CPB1P15086 417 aa11.69□□□□□ -0.54
LAMB1-203ENST00000393560 NELFEP18615 380 aaKnown RBP11.69□□□□□ -0.54
LAMB1-203ENST00000393560 PSMA4P25789 261 aaKnown RBP11.69□□□□□ -0.54
LAMB1-203ENST00000393560 TOB1P50616 345 aaPredicted RBP11.69□□□□□ -0.54
LAMB1-203ENST00000393560 ZBTB16Q05516 673 aa11.69□□□□□ -0.54
LAMB1-203ENST00000393560 C6orf52Q5T4I8 152 aa11.69□□□□□ -0.54
LAMB1-203ENST00000393560 UGT3A1Q6NUS8 523 aa11.69□□□□□ -0.54
LAMB1-203ENST00000393560 POTEBQ6S5H4 581 aa11.69□□□□□ -0.54
LAMB1-203ENST00000393560 ATG14Q6ZNE5 492 aa11.69□□□□□ -0.54
LAMB1-203ENST00000393560 PLEKHM3Q6ZWE6 761 aa11.69□□□□□ -0.54
LAMB1-203ENST00000393560 AFAP1L2Q8N4X5 818 aa11.69□□□□□ -0.54
LAMB1-203ENST00000393560 GSTCDQ8NEC7 633 aa11.69□□□□□ -0.54
LAMB1-203ENST00000393560 NCLNQ969V3 563 aa11.69□□□□□ -0.54
LAMB1-203ENST00000393560 KCTD10Q9H3F6 313 aa11.69□□□□□ -0.54
LAMB1-203ENST00000393560 SPATA6Q9NWH7 488 aaPredicted RBP11.69□□□□□ -0.54
LAMB1-203ENST00000393560 HEY2Q9UBP5 337 aa11.69□□□□□ -0.54
LAMB1-203ENST00000393560 MAPRE3Q9UPY8 281 aa11.69□□□□□ -0.54
LAMB1-203ENST00000393560 JAG2Q9Y219 1238 aa11.69□□□□□ -0.54
LAMB1-203ENST00000393560 ZNF532Q9HCE3 1301 aa11.69□□□□□ -0.54
LAMB1-203ENST00000393560 RIC1Q4ADV7 1423 aa11.69□□□□□ -0.54
LAMB1-203ENST00000393560 A0A0G2JMP0 313 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 C16orf96A6NNT2 1141 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 MINDY4BA8MYZ0 360 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 LINC00587B1AMM8 73 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 C2CD2LO14523 706 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 ADAMTS3O15072 1205 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 PLA2G6O60733 806 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 BMP15O95972 392 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 RAD51Q06609 339 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 TRAF2Q12933 501 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 CDK10Q15131 360 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 AARS2Q5JTZ9 985 aaKnown RBP11.68□□□□□ -0.54
LAMB1-203ENST00000393560 LDLRAP1Q5SW96 308 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 ARSKQ6UWY0 536 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 AGMOQ6ZNB7 445 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 CATSPER4Q7RTX7 472 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 MAPKAPK5Q8IW41 473 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 SLC44A2Q8IWA5 706 aaPredicted RBP11.68□□□□□ -0.54
LAMB1-203ENST00000393560 DIS3L2Q8IYB7 885 aaKnown RBP11.68□□□□□ -0.54
LAMB1-203ENST00000393560 SHKBP1Q8TBC3 707 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 PHOSPHO2Q8TCD6 241 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 AFG1LQ8WV93 481 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 PHF21AQ96BD5 680 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 RBM15Q96T37 977 aaKnown RBP eCLIP11.68□□□□□ -0.542e-6■■□□□ 12.3
LAMB1-203ENST00000393560 SLC6A17Q9H1V8 727 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 SPC25Q9HBM1 224 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 VPS45Q9NRW7 570 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 ARHGAP20Q9P2F6 1191 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 CNOT7Q9UIV1 285 aaKnown RBP11.68□□□□□ -0.54
LAMB1-203ENST00000393560 PADI4Q9UM07 663 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 PDE8BO95263 885 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 IFI30P13284 250 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 HPGDP15428 266 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 CAPZA2P47755 286 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 NPEPPSP55786 919 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 SMAD4Q13485 552 aaKnown RBP11.68□□□□□ -0.54
LAMB1-203ENST00000393560 ZACNQ401N2 412 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 RTP2Q5QGT7 225 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 RABGAP1LQ5R372 815 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 MEI1Q5TIA1 1274 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 IQSEC1Q6DN90 963 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 GTF2IRD2BQ6EKJ0 949 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 STYK1Q6J9G0 422 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 MFSD5Q6N075 450 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 PIK3AP1Q6ZUJ8 805 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 GTF2IRD2Q86UP8 949 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 AMIGO3Q86WK7 504 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 CHID1Q9BWS9 393 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 POLE4Q9NR33 117 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 TRPM5Q9NZQ8 1165 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 ZSWIM5Q9P217 1185 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 ZNF229Q9UJW7 825 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 SPATA2Q9UM82 520 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 NWD2Q9ULI1 1742 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 RPTORQ8N122 1335 aa11.68□□□□□ -0.54
LAMB1-203ENST00000393560 MEI4A8MW99 385 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms