RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 TUBP50607 506 aa8.9□□□□□ -0.98
TDP1-203ENST00000393454 EPHB3P54753 998 aa8.9□□□□□ -0.98
TDP1-203ENST00000393454 CREMQ03060 361 aa8.9□□□□□ -0.98
TDP1-203ENST00000393454 SLC29A2Q14542 456 aa8.9□□□□□ -0.98
TDP1-203ENST00000393454 TRIP4Q15650 581 aaPredicted RBP8.9□□□□□ -0.98
TDP1-203ENST00000393454 SKIDA1Q1XH10 827 aa8.9□□□□□ -0.98
TDP1-203ENST00000393454 SPDYCQ5MJ68 293 aa8.9□□□□□ -0.98
TDP1-203ENST00000393454 SYCP2LQ5T4T6 812 aa8.9□□□□□ -0.98
TDP1-203ENST00000393454 ANKRD22Q5VYY1 191 aa8.9□□□□□ -0.98
TDP1-203ENST00000393454 LRIG3Q6UXM1 1119 aa8.9□□□□□ -0.98
TDP1-203ENST00000393454 ARHGEF18Q6ZSZ5 1173 aa8.9□□□□□ -0.98
TDP1-203ENST00000393454 TRMT10CQ7L0Y3 403 aaKnown RBP8.9□□□□□ -0.98
TDP1-203ENST00000393454 PDZD8Q8NEN9 1154 aa8.9□□□□□ -0.98
TDP1-203ENST00000393454 HERVK_113Q902F9 699 aa8.9□□□□□ -0.98
TDP1-203ENST00000393454 PRCCQ92733 491 aaPredicted RBP8.9□□□□□ -0.98
TDP1-203ENST00000393454 TBC1D31Q96DN5 1066 aa8.9□□□□□ -0.98
TDP1-203ENST00000393454 SLC39A13Q96H72 371 aa8.9□□□□□ -0.98
TDP1-203ENST00000393454 CEP295NLQ96MC4 621 aa8.9□□□□□ -0.98
TDP1-203ENST00000393454 CDK5RAP1Q96SZ6 601 aaKnown RBP8.9□□□□□ -0.98
TDP1-203ENST00000393454 RBM15Q96T37 977 aaKnown RBP eCLIP8.9□□□□□ -0.98
TDP1-203ENST00000393454 FOXP3Q9BZS1 431 aa8.9□□□□□ -0.98
TDP1-203ENST00000393454 ZBP1Q9H171 429 aa8.9□□□□□ -0.98
TDP1-203ENST00000393454 CDC42EP4Q9H3Q1 356 aaKnown RBP8.9□□□□□ -0.98
TDP1-203ENST00000393454 PRDM12Q9H4Q4 367 aa8.9□□□□□ -0.98
TDP1-203ENST00000393454 SAYSD1Q9NPB0 183 aa8.9□□□□□ -0.98
TDP1-203ENST00000393454 TRPM5Q9NZQ8 1165 aa8.9□□□□□ -0.98
TDP1-203ENST00000393454 SHOC2Q9UQ13 582 aa8.9□□□□□ -0.98
TDP1-203ENST00000393454 SSX2IPQ9Y2D8 614 aa8.9□□□□□ -0.98
TDP1-203ENST00000393454 HS3ST4Q9Y661 456 aa8.9□□□□□ -0.98
TDP1-203ENST00000393454 LCHNA4D1U4 455 aa8.9□□□□□ -0.99
TDP1-203ENST00000393454 GOLGA8KD6RF30 607 aa8.9□□□□□ -0.99
TDP1-203ENST00000393454 E9PAM4 449 aa8.9□□□□□ -0.99
TDP1-203ENST00000393454 DFFAO00273 331 aa8.9□□□□□ -0.99
TDP1-203ENST00000393454 RIPK2O43353 540 aa8.9□□□□□ -0.99
TDP1-203ENST00000393454 RNF40O75150 1001 aa8.9□□□□□ -0.99
TDP1-203ENST00000393454 GCATO75600 419 aa8.9□□□□□ -0.99
TDP1-203ENST00000393454 ZDHHC11BP0C7U3 371 aa8.9□□□□□ -0.99
TDP1-203ENST00000393454 MYZAPP0CAP1 466 aa8.9□□□□□ -0.99
TDP1-203ENST00000393454 CTSAP10619 480 aa8.9□□□□□ -0.99
TDP1-203ENST00000393454 VAV1P15498 845 aa8.9□□□□□ -0.99
TDP1-203ENST00000393454 CTNNB1P35222 781 aa8.9□□□□□ -0.99
TDP1-203ENST00000393454 ATP5C1P36542 298 aaKnown RBP8.9□□□□□ -0.99
TDP1-203ENST00000393454 KYNUQ16719 465 aa8.9□□□□□ -0.99
TDP1-203ENST00000393454 HP1BP3Q5SSJ5 553 aaPredicted RBP8.9□□□□□ -0.99
TDP1-203ENST00000393454 HECTD3Q5T447 861 aa8.9□□□□□ -0.99
TDP1-203ENST00000393454 FAXCQ5TGI0 409 aa8.9□□□□□ -0.99
TDP1-203ENST00000393454 LRRC31Q6UY01 552 aa8.9□□□□□ -0.99
TDP1-203ENST00000393454 CENPUQ71F23 418 aa8.9□□□□□ -0.99
TDP1-203ENST00000393454 C14orf80Q86SX3 495 aa8.9□□□□□ -0.99
TDP1-203ENST00000393454 TADA2BQ86TJ2 420 aa8.9□□□□□ -0.99
TDP1-203ENST00000393454 TP53INP2Q8IXH6 220 aa8.9□□□□□ -0.99
TDP1-203ENST00000393454 RTP4Q96DX8 246 aa8.9□□□□□ -0.99
TDP1-203ENST00000393454 P2RY11Q96G91 374 aa8.9□□□□□ -0.99
TDP1-203ENST00000393454 CELF6Q96J87 481 aaKnown RBP8.9□□□□□ -0.99
TDP1-203ENST00000393454 C9orf72Q96LT7 481 aa8.9□□□□□ -0.99
TDP1-203ENST00000393454 HTATIP2Q9BUP3 242 aa8.9□□□□□ -0.99
TDP1-203ENST00000393454 KLC2Q9H0B6 622 aa8.9□□□□□ -0.99
TDP1-203ENST00000393454 MTIF3Q9H2K0 278 aaKnown RBP8.9□□□□□ -0.99
TDP1-203ENST00000393454 CATSPERBQ9H7T0 1116 aa8.9□□□□□ -0.99
TDP1-203ENST00000393454 ALG13Q9NP73 1137 aaKnown RBP8.9□□□□□ -0.99
TDP1-203ENST00000393454 ENTPD7Q9NQZ7 604 aa8.9□□□□□ -0.99
TDP1-203ENST00000393454 VPS18Q9P253 973 aa8.9□□□□□ -0.99
TDP1-203ENST00000393454 FNIP2Q9P278 1114 aa8.9□□□□□ -0.99
TDP1-203ENST00000393454 BCCIPQ9P287 314 aaKnown RBP eCLIP8.9□□□□□ -0.99
TDP1-203ENST00000393454 DNMT3LQ9UJW3 386 aa8.9□□□□□ -0.99
TDP1-203ENST00000393454 FARP1Q9Y4F1 1045 aaPredicted RBP8.9□□□□□ -0.99
TDP1-203ENST00000393454 RAD54BQ9Y620 910 aa8.9□□□□□ -0.99
TDP1-203ENST00000393454 NUP205Q92621 2012 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.89□□□□□ -0.99
TDP1-203ENST00000393454 TCRBV7S3A2A0A539 114 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 ZNF840PA6NDX5 716 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 C5orf60A6NFR6 353 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 E7EVH7 732 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 F5H423 210 aaPredicted RBP8.89□□□□□ -0.99
TDP1-203ENST00000393454 H0YGN5 161 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 NCAM2O15394 837 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 FGF10O15520 208 aaPredicted RBP8.89□□□□□ -0.99
TDP1-203ENST00000393454 LILRB3O75022 631 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 CNPP09543 421 aaKnown RBP8.89□□□□□ -0.99
TDP1-203ENST00000393454 HMGA1P17096 107 aaKnown RBP8.89□□□□□ -0.99
TDP1-203ENST00000393454 MX2P20592 715 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 MAGEA4P43358 317 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 LMAN1P49257 510 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 KPNA1P52294 538 aaPredicted RBP8.89□□□□□ -0.99
TDP1-203ENST00000393454 MLLT6P55198 1093 aaPredicted RBP8.89□□□□□ -0.99
TDP1-203ENST00000393454 EIF3BP55884 814 aaKnown RBP8.89□□□□□ -0.99
TDP1-203ENST00000393454 ARL4CP56559 192 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 GAD2Q05329 585 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 ZNF844Q08AG5 666 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 PDIA2Q13087 525 aaKnown RBP8.89□□□□□ -0.99
TDP1-203ENST00000393454 PRKD1Q15139 912 aaPredicted RBP8.89□□□□□ -0.99
TDP1-203ENST00000393454 HIF1AQ16665 826 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 KRT71Q3SY84 523 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 UBAP2Q5T6F2 1119 aaKnown RBP8.89□□□□□ -0.99
TDP1-203ENST00000393454 PIK3R6Q5UE93 754 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 C4orf22Q6V702 233 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 DNAJB7Q7Z6W7 309 aaPredicted RBP8.89□□□□□ -0.99
TDP1-203ENST00000393454 HOOK3Q86VS8 718 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 TCEAL8Q8IYN2 117 aa8.89□□□□□ -0.99
TDP1-203ENST00000393454 NPWQ8N729 165 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms