RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 IMPDH2P12268 514 aa16.8■□□□□ 0.28
PHTF1-205ENST00000393357 CPA3P15088 417 aa16.8■□□□□ 0.28
PHTF1-205ENST00000393357 TPH1P17752 444 aa16.8■□□□□ 0.28
PHTF1-205ENST00000393357 TUBB3Q13509 450 aa16.8■□□□□ 0.28
PHTF1-205ENST00000393357 C15orf39Q6ZRI6 1047 aa16.8■□□□□ 0.28
PHTF1-205ENST00000393357 PLD5Q8N7P1 536 aa16.8■□□□□ 0.28
PHTF1-205ENST00000393357 TDRD5Q8NAT2 981 aaKnown RBP16.8■□□□□ 0.28
PHTF1-205ENST00000393357 AGAP2Q99490 1192 aa16.8■□□□□ 0.28
PHTF1-205ENST00000393357 YIPF2Q9BWQ6 316 aa16.8■□□□□ 0.28
PHTF1-205ENST00000393357 COQ10BQ9H8M1 238 aa16.8■□□□□ 0.28
PHTF1-205ENST00000393357 TMPRSS4Q9NRS4 437 aa16.8■□□□□ 0.28
PHTF1-205ENST00000393357 SFMBT1Q9UHJ3 866 aa16.8■□□□□ 0.28
PHTF1-205ENST00000393357 PHGDHO43175 533 aaKnown RBP16.79■□□□□ 0.28
PHTF1-205ENST00000393357 NR3C2P08235 984 aa16.79■□□□□ 0.28
PHTF1-205ENST00000393357 GARTP22102 1010 aa16.79■□□□□ 0.28
PHTF1-205ENST00000393357 CCDC142Q17RM4 750 aa16.79■□□□□ 0.28
PHTF1-205ENST00000393357 RNF135Q8IUD6 432 aa16.79■□□□□ 0.28
PHTF1-205ENST00000393357 ACTRT2Q8TDY3 377 aa16.79■□□□□ 0.28
PHTF1-205ENST00000393357 ATP6V0A1Q93050 837 aa16.79■□□□□ 0.28
PHTF1-205ENST00000393357 NIF3L1Q9GZT8 377 aa16.79■□□□□ 0.28
PHTF1-205ENST00000393357 COL16A1Q07092 1604 aaPredicted RBP16.79■□□□□ 0.28
PHTF1-205ENST00000393357 KCNK1O00180 336 aa16.79■□□□□ 0.28
PHTF1-205ENST00000393357 PLIN3O60664 434 aa16.79■□□□□ 0.28
PHTF1-205ENST00000393357 RNASEH2AO75792 299 aaKnown RBP16.79■□□□□ 0.28
PHTF1-205ENST00000393357 MT-ND1P03886 318 aa16.79■□□□□ 0.28
PHTF1-205ENST00000393357 TSPAN8P19075 237 aa16.79■□□□□ 0.28
PHTF1-205ENST00000393357 ABCE1P61221 599 aaKnown RBP16.79■□□□□ 0.28
PHTF1-205ENST00000393357 BNC2Q6ZN30 1099 aaPredicted RBP16.79■□□□□ 0.28
PHTF1-205ENST00000393357 SLC7A3Q8WY07 619 aa16.79■□□□□ 0.28
PHTF1-205ENST00000393357 KLHL32Q96NJ5 620 aa16.79■□□□□ 0.28
PHTF1-205ENST00000393357 SELENONQ9NZV5 590 aa16.79■□□□□ 0.28
PHTF1-205ENST00000393357 PAK5Q9P286 719 aa16.79■□□□□ 0.28
PHTF1-205ENST00000393357 EPS15L1Q9UBC2 864 aa16.79■□□□□ 0.28
PHTF1-205ENST00000393357 PSMD13Q9UNM6 376 aa16.79■□□□□ 0.28
PHTF1-205ENST00000393357 ZNF510Q9Y2H8 683 aa16.79■□□□□ 0.28
PHTF1-205ENST00000393357 WNK3Q9BYP7 1800 aa16.79■□□□□ 0.28
PHTF1-205ENST00000393357 NHSQ6T4R5 1651 aa16.79■□□□□ 0.28
PHTF1-205ENST00000393357 APOL1O14791 398 aa16.79■□□□□ 0.28
PHTF1-205ENST00000393357 CCNT2O60583 730 aaKnown RBP16.79■□□□□ 0.28
PHTF1-205ENST00000393357 SNNO75324 88 aaPredicted RBP16.79■□□□□ 0.28
PHTF1-205ENST00000393357 YAP1P46937 504 aaKnown RBP16.79■□□□□ 0.28
PHTF1-205ENST00000393357 ACTR2P61160 394 aa16.79■□□□□ 0.28
PHTF1-205ENST00000393357 CEACAM7Q14002 265 aa16.79■□□□□ 0.28
PHTF1-205ENST00000393357 HNRNPDQ14103 355 aaKnown RBP16.79■□□□□ 0.28
PHTF1-205ENST00000393357 RC3H1Q5TC82 1133 aaKnown RBP16.79■□□□□ 0.28
PHTF1-205ENST00000393357 KBTBD6Q86V97 674 aa16.79■□□□□ 0.28
PHTF1-205ENST00000393357 TRIM50Q86XT4 487 aa16.79■□□□□ 0.28
PHTF1-205ENST00000393357 PYROXD2Q8N2H3 581 aa16.79■□□□□ 0.28
PHTF1-205ENST00000393357 CLEC4DQ8WXI8 215 aa16.79■□□□□ 0.28
PHTF1-205ENST00000393357 SORT1Q99523 831 aa16.79■□□□□ 0.28
PHTF1-205ENST00000393357 SOX17Q9H6I2 414 aaPredicted RBP16.79■□□□□ 0.28
PHTF1-205ENST00000393357 NRDE2Q9H7Z3 1164 aa16.79■□□□□ 0.28
PHTF1-205ENST00000393357 NOL11Q9H8H0 719 aaKnown RBP16.79■□□□□ 0.28
PHTF1-205ENST00000393357 RSAD1Q9HA92 442 aa16.79■□□□□ 0.28
PHTF1-205ENST00000393357 CDC14AQ9UNH5 594 aa16.79■□□□□ 0.28
PHTF1-205ENST00000393357 UBIAD1Q9Y5Z9 338 aa16.79■□□□□ 0.28
PHTF1-205ENST00000393357 TK2O00142 265 aa16.78■□□□□ 0.28
PHTF1-205ENST00000393357 DGAT1O75907 488 aa16.78■□□□□ 0.28
PHTF1-205ENST00000393357 SERPINE1P05121 402 aa16.78■□□□□ 0.28
PHTF1-205ENST00000393357 FAM163BP0C2L3 166 aa16.78■□□□□ 0.28
PHTF1-205ENST00000393357 THRAP10827 490 aa16.78■□□□□ 0.28
PHTF1-205ENST00000393357 PIK3R1P27986 724 aa16.78■□□□□ 0.28
PHTF1-205ENST00000393357 EPHX2P34913 555 aa16.78■□□□□ 0.28
PHTF1-205ENST00000393357 CRHR1P34998 444 aa16.78■□□□□ 0.28
PHTF1-205ENST00000393357 DNAAF3Q8N9W5 541 aa16.78■□□□□ 0.28
PHTF1-205ENST00000393357 ACVR1CQ8NER5 493 aa16.78■□□□□ 0.28
PHTF1-205ENST00000393357 TRAPPC12Q8WVT3 735 aa16.78■□□□□ 0.28
PHTF1-205ENST00000393357 APBA2Q99767 749 aa16.78■□□□□ 0.28
PHTF1-205ENST00000393357 SPDYE2BA6NHP3 402 aa16.78■□□□□ 0.28
PHTF1-205ENST00000393357 PDLIM1O00151 329 aa16.78■□□□□ 0.28
PHTF1-205ENST00000393357 GIPC1O14908 333 aa16.78■□□□□ 0.28
PHTF1-205ENST00000393357 PAPSS1O43252 624 aaPredicted RBP16.78■□□□□ 0.28
PHTF1-205ENST00000393357 B4GALT5O43286 388 aa16.78■□□□□ 0.28
PHTF1-205ENST00000393357 SPDYE6P0CI01 402 aa16.78■□□□□ 0.28
PHTF1-205ENST00000393357 NAGLUP54802 743 aa16.78■□□□□ 0.28
PHTF1-205ENST00000393357 ZNF460Q14592 562 aa16.78■□□□□ 0.28
PHTF1-205ENST00000393357 NOMO1Q15155 1222 aa16.78■□□□□ 0.28
PHTF1-205ENST00000393357 SPDYE2Q495Y8 402 aa16.78■□□□□ 0.28
PHTF1-205ENST00000393357 GRAMD4Q6IC98 578 aa16.78■□□□□ 0.28
PHTF1-205ENST00000393357 ZNF554Q86TJ5 538 aa16.78■□□□□ 0.28
PHTF1-205ENST00000393357 RNF149Q8NC42 400 aa16.78■□□□□ 0.28
PHTF1-205ENST00000393357 NDRG1Q92597 394 aaKnown RBP16.78■□□□□ 0.28
PHTF1-205ENST00000393357 CGRRF1Q99675 332 aa16.78■□□□□ 0.28
PHTF1-205ENST00000393357 PTPRHQ9HD43 1115 aa16.78■□□□□ 0.28
PHTF1-205ENST00000393357 CDH2P19022 906 aaPredicted RBP16.77■□□□□ 0.28
PHTF1-205ENST00000393357 JAK3P52333 1124 aa16.77■□□□□ 0.28
PHTF1-205ENST00000393357 KRT76Q01546 638 aa16.77■□□□□ 0.28
PHTF1-205ENST00000393357 CD300CQ08708 224 aa16.77■□□□□ 0.28
PHTF1-205ENST00000393357 DACT2Q5SW24 774 aa16.77■□□□□ 0.28
PHTF1-205ENST00000393357 LRRC38Q5VT99 294 aa16.77■□□□□ 0.28
PHTF1-205ENST00000393357 ZNF410Q86VK4 478 aa16.77■□□□□ 0.28
PHTF1-205ENST00000393357 XYLT1Q86Y38 959 aa16.77■□□□□ 0.28
PHTF1-205ENST00000393357 SULF1Q8IWU6 871 aa16.77■□□□□ 0.28
PHTF1-205ENST00000393357 TP53INP2Q8IXH6 220 aa16.77■□□□□ 0.28
PHTF1-205ENST00000393357 FAM47BQ8NA70 645 aa16.77■□□□□ 0.28
PHTF1-205ENST00000393357 KYQ8NBH2 561 aa16.77■□□□□ 0.28
PHTF1-205ENST00000393357 PCDH19Q8TAB3 1148 aa16.77■□□□□ 0.28
PHTF1-205ENST00000393357 THAP11Q96EK4 314 aa16.77■□□□□ 0.28
PHTF1-205ENST00000393357 JPH1Q9HDC5 661 aaPredicted RBP16.77■□□□□ 0.28
PHTF1-205ENST00000393357 CDK5RAP2Q96SN8 1893 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms