RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 ARRDC4Q8NCT1 418 aa12.66□□□□□ -0.38
RFC5-201ENST00000392542 SMG8Q8ND04 991 aaKnown RBP12.66□□□□□ -0.38
RFC5-201ENST00000392542 SMC1BQ8NDV3 1235 aa12.66□□□□□ -0.38
RFC5-201ENST00000392542 WNT8BQ93098 351 aa12.66□□□□□ -0.38
RFC5-201ENST00000392542 CEP41Q9BYV8 373 aa12.66□□□□□ -0.38
RFC5-201ENST00000392542 PRDM12Q9H4Q4 367 aa12.66□□□□□ -0.38
RFC5-201ENST00000392542 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.66□□□□□ -0.38
RFC5-201ENST00000392542 THAP1Q9NVV9 213 aa12.66□□□□□ -0.38
RFC5-201ENST00000392542 COX16Q9P0S2 106 aa12.66□□□□□ -0.38
RFC5-201ENST00000392542 IGSF9Q9P2J2 1179 aa12.66□□□□□ -0.38
RFC5-201ENST00000392542 PPARGC1AQ9UBK2 798 aaKnown RBP12.66□□□□□ -0.38
RFC5-201ENST00000392542 GNEQ9Y223 722 aaKnown RBP12.66□□□□□ -0.38
RFC5-201ENST00000392542 EEF2KO00418 725 aaKnown RBP12.65□□□□□ -0.38
RFC5-201ENST00000392542 TPP1O14773 563 aa12.65□□□□□ -0.38
RFC5-201ENST00000392542 DCLK1O15075 740 aa12.65□□□□□ -0.38
RFC5-201ENST00000392542 TREHO43280 583 aa12.65□□□□□ -0.38
RFC5-201ENST00000392542 BEST1O76090 585 aa12.65□□□□□ -0.38
RFC5-201ENST00000392542 GSRP00390 522 aa12.65□□□□□ -0.38
RFC5-201ENST00000392542 ALDOAP04075 364 aaKnown RBP12.65□□□□□ -0.38
RFC5-201ENST00000392542 KITP10721 976 aa12.65□□□□□ -0.38
RFC5-201ENST00000392542 ACAT1P24752 427 aaKnown RBP12.65□□□□□ -0.38
RFC5-201ENST00000392542 LRPAP1P30533 357 aa12.65□□□□□ -0.38
RFC5-201ENST00000392542 PSEN2P49810 448 aa12.65□□□□□ -0.38
RFC5-201ENST00000392542 NDUFV1P49821 464 aa12.65□□□□□ -0.38
RFC5-201ENST00000392542 NAA25Q14CX7 972 aa12.65□□□□□ -0.38
RFC5-201ENST00000392542 FAM110CQ1W6H9 321 aa12.65□□□□□ -0.38
RFC5-201ENST00000392542 FASTKD1Q53R41 847 aaKnown RBP12.65□□□□□ -0.38
RFC5-201ENST00000392542 ZCCHC23Q6ZST2 131 aa12.65□□□□□ -0.38
RFC5-201ENST00000392542 CLEC20AQ6ZU45 233 aa12.65□□□□□ -0.38
RFC5-201ENST00000392542 TREML1Q86YW5 311 aa12.65□□□□□ -0.38
RFC5-201ENST00000392542 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.65□□□□□ -0.383e-6■■■■■ 69.6
RFC5-201ENST00000392542 SIX6OS1Q8N1H7 587 aa12.65□□□□□ -0.38
RFC5-201ENST00000392542 NME8Q8N427 588 aa12.65□□□□□ -0.38
RFC5-201ENST00000392542 TEX9Q8N6V9 391 aa12.65□□□□□ -0.38
RFC5-201ENST00000392542 CCNYQ8ND76 341 aa12.65□□□□□ -0.38
RFC5-201ENST00000392542 C20orf27Q9GZN8 174 aa12.65□□□□□ -0.38
RFC5-201ENST00000392542 ZNF408Q9H9D4 720 aa12.65□□□□□ -0.38
RFC5-201ENST00000392542 PIH1D1Q9NWS0 290 aaKnown RBP12.65□□□□□ -0.38
RFC5-201ENST00000392542 SYBUQ9NX95 663 aa12.65□□□□□ -0.38
RFC5-201ENST00000392542 MARCOQ9UEW3 520 aaPredicted RBP12.65□□□□□ -0.38
RFC5-201ENST00000392542 EMCNQ9ULC0 261 aa12.65□□□□□ -0.38
RFC5-201ENST00000392542 LRRC42Q9Y546 428 aa12.65□□□□□ -0.38
RFC5-201ENST00000392542 FAM163BP0C2L3 166 aa12.64□□□□□ -0.39
RFC5-201ENST00000392542 IRX4P78413 519 aa12.64□□□□□ -0.39
RFC5-201ENST00000392542 IFRD2Q12894 506 aaPredicted RBP12.64□□□□□ -0.39
RFC5-201ENST00000392542 NME3Q13232 169 aa12.64□□□□□ -0.39
RFC5-201ENST00000392542 PDE1CQ14123 709 aaPredicted RBP12.64□□□□□ -0.39
RFC5-201ENST00000392542 KHDC1Q4VXA5 237 aaKnown RBP12.64□□□□□ -0.39
RFC5-201ENST00000392542 PRAMEF19Q5SWL8 479 aa12.64□□□□□ -0.39
RFC5-201ENST00000392542 N4BP2L1Q5TBK1 243 aaPredicted RBP12.64□□□□□ -0.39
RFC5-201ENST00000392542 SYPL2Q5VXT5 272 aa12.64□□□□□ -0.39
RFC5-201ENST00000392542 C16orf46Q6P387 395 aa12.64□□□□□ -0.39
RFC5-201ENST00000392542 RFX8Q6ZV50 586 aa12.64□□□□□ -0.39
RFC5-201ENST00000392542 PPP1R14CQ8TAE6 165 aa12.64□□□□□ -0.39
RFC5-201ENST00000392542 PGBD4Q96DM1 585 aa12.64□□□□□ -0.39
RFC5-201ENST00000392542 MED10Q9BTT4 135 aa12.64□□□□□ -0.39
RFC5-201ENST00000392542 HAS3O00219 553 aa12.64□□□□□ -0.39
RFC5-201ENST00000392542 ZNF189O75820 626 aaPredicted RBP12.64□□□□□ -0.39
RFC5-201ENST00000392542 CRYBB1P53674 252 aaPredicted RBP12.64□□□□□ -0.39
RFC5-201ENST00000392542 MDH1BQ5I0G3 518 aa12.64□□□□□ -0.39
RFC5-201ENST00000392542 BSPRYQ5W0U4 402 aa12.64□□□□□ -0.39
RFC5-201ENST00000392542 WSCD1Q658N2 575 aa12.64□□□□□ -0.39
RFC5-201ENST00000392542 MBLAC2Q68D91 279 aa12.64□□□□□ -0.39
RFC5-201ENST00000392542 HFE2Q6ZVN8 426 aa12.64□□□□□ -0.39
RFC5-201ENST00000392542 TLK2Q86UE8 772 aa12.64□□□□□ -0.39
RFC5-201ENST00000392542 ARHGAP24Q8N264 748 aa12.64□□□□□ -0.39
RFC5-201ENST00000392542 ATP2A3Q93084 1043 aa12.64□□□□□ -0.39
RFC5-201ENST00000392542 NAF1Q96HR8 494 aaKnown RBP12.64□□□□□ -0.39
RFC5-201ENST00000392542 SLC9A7Q96T83 725 aa12.64□□□□□ -0.39
RFC5-201ENST00000392542 PARK7Q99497 189 aaKnown RBP12.64□□□□□ -0.39
RFC5-201ENST00000392542 SIKE1Q9BRV8 207 aa12.64□□□□□ -0.39
RFC5-201ENST00000392542 PIGVQ9NUD9 493 aa12.64□□□□□ -0.39
RFC5-201ENST00000392542 DCDC2Q9UHG0 476 aa12.64□□□□□ -0.39
RFC5-201ENST00000392542 PTGESO14684 152 aa12.63□□□□□ -0.39
RFC5-201ENST00000392542 GABRDO14764 452 aa12.63□□□□□ -0.39
RFC5-201ENST00000392542 PLIN3O60664 434 aa12.63□□□□□ -0.39
RFC5-201ENST00000392542 ENO1P06733 434 aaKnown RBP12.63□□□□□ -0.39
RFC5-201ENST00000392542 ITGA2BP08514 1039 aa12.63□□□□□ -0.39
RFC5-201ENST00000392542 FAM200BP0CF97 657 aa12.63□□□□□ -0.39
RFC5-201ENST00000392542 FGF3P11487 239 aaPredicted RBP12.63□□□□□ -0.39
RFC5-201ENST00000392542 YBX3P16989 372 aaKnown RBP eCLIP12.63□□□□□ -0.392e-7■■□□□ 11.9
RFC5-201ENST00000392542 PTDSS1P48651 473 aaKnown RBP12.63□□□□□ -0.39
RFC5-201ENST00000392542 TKTL1P51854 596 aa12.63□□□□□ -0.39
RFC5-201ENST00000392542 RPL10AP62906 217 aaKnown RBP12.63□□□□□ -0.39
RFC5-201ENST00000392542 KPNB1Q14974 876 aaKnown RBP12.63□□□□□ -0.39
RFC5-201ENST00000392542 TBCCQ15814 346 aa12.63□□□□□ -0.39
RFC5-201ENST00000392542 CMPK2Q5EBM0 449 aa12.63□□□□□ -0.39
RFC5-201ENST00000392542 ACSBG2Q5FVE4 666 aa12.63□□□□□ -0.39
RFC5-201ENST00000392542 SPANXN3Q5MJ09 141 aa12.63□□□□□ -0.39
RFC5-201ENST00000392542 RASSF3Q86WH2 238 aa12.63□□□□□ -0.39
RFC5-201ENST00000392542 TMPRSS6Q8IU80 811 aa12.63□□□□□ -0.39
RFC5-201ENST00000392542 NTAN1Q96AB6 310 aa12.63□□□□□ -0.39
RFC5-201ENST00000392542 PSAT1Q9Y617 370 aa12.63□□□□□ -0.39
RFC5-201ENST00000392542 B2RBV5 119 aa12.63□□□□□ -0.39
RFC5-201ENST00000392542 NRP1O14786 923 aa12.63□□□□□ -0.39
RFC5-201ENST00000392542 FBXO21O94952 628 aa12.63□□□□□ -0.39
RFC5-201ENST00000392542 POLBP06746 335 aa12.63□□□□□ -0.39
RFC5-201ENST00000392542 ADRA1BP35368 520 aa12.63□□□□□ -0.39
RFC5-201ENST00000392542 PGM1P36871 562 aa12.63□□□□□ -0.39
RFC5-201ENST00000392542 CPA2P48052 419 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms