RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 OR2T3Q8NH03 318 aa17.23■□□□□ 0.35
PTPRK-208ENST00000392449 WFIKKN2Q8TEU8 576 aa17.23■□□□□ 0.35
PTPRK-208ENST00000392449 FOXJ1Q92949 421 aa17.23■□□□□ 0.35
PTPRK-208ENST00000392449 BECN2A8MW95 431 aa17.22■□□□□ 0.35
PTPRK-208ENST00000392449 E5RJQ4 531 aa17.22■□□□□ 0.35
PTPRK-208ENST00000392449 PAPSS1O43252 624 aaPredicted RBP17.22■□□□□ 0.35
PTPRK-208ENST00000392449 THAP12O43422 761 aa17.22■□□□□ 0.35
PTPRK-208ENST00000392449 CD59P13987 128 aa17.22■□□□□ 0.35
PTPRK-208ENST00000392449 RPL34P49207 117 aaKnown RBP17.22■□□□□ 0.35
PTPRK-208ENST00000392449 ZNF445P59923 1031 aa17.22■□□□□ 0.35
PTPRK-208ENST00000392449 SIM1P81133 766 aaPredicted RBP17.22■□□□□ 0.35
PTPRK-208ENST00000392449 RING1Q06587 406 aa17.22■□□□□ 0.35
PTPRK-208ENST00000392449 GRIK2Q13002 908 aa17.22■□□□□ 0.35
PTPRK-208ENST00000392449 TAF5Q15542 800 aa17.22■□□□□ 0.35
PTPRK-208ENST00000392449 ARHGAP44Q17R89 818 aa17.22■□□□□ 0.35
PTPRK-208ENST00000392449 WDR45BQ5MNZ6 344 aa17.22■□□□□ 0.35
PTPRK-208ENST00000392449 TRIM65Q6PJ69 517 aa17.22■□□□□ 0.35
PTPRK-208ENST00000392449 RABEPKQ7Z6M1 372 aa17.22■□□□□ 0.35
PTPRK-208ENST00000392449 MFN1Q8IWA4 741 aa17.22■□□□□ 0.35
PTPRK-208ENST00000392449 UNC45BQ8IWX7 931 aa17.22■□□□□ 0.35
PTPRK-208ENST00000392449 LMLNQ96KR4 655 aa17.22■□□□□ 0.35
PTPRK-208ENST00000392449 C6orf106Q9H6K1 298 aaPredicted RBP17.22■□□□□ 0.35
PTPRK-208ENST00000392449 PRSS16Q9NQE7 514 aa17.22■□□□□ 0.35
PTPRK-208ENST00000392449 KIAA1468Q9P260 1216 aa17.22■□□□□ 0.35
PTPRK-208ENST00000392449 EIF2B4Q9UI10 523 aaKnown RBP17.22■□□□□ 0.35
PTPRK-208ENST00000392449 AJAP1Q9UKB5 411 aaPredicted RBP17.22■□□□□ 0.35
PTPRK-208ENST00000392449 PLA2G4CQ9UP65 541 aa17.22■□□□□ 0.35
PTPRK-208ENST00000392449 IGLV3-19P01714 112 aa17.21■□□□□ 0.35
PTPRK-208ENST00000392449 DLDP09622 509 aaKnown RBP17.21■□□□□ 0.35
PTPRK-208ENST00000392449 GNA15P30679 374 aa17.21■□□□□ 0.35
PTPRK-208ENST00000392449 ACSL1P33121 698 aa17.21■□□□□ 0.35
PTPRK-208ENST00000392449 USP8P40818 1118 aa17.21■□□□□ 0.35
PTPRK-208ENST00000392449 FSCBQ5H9T9 825 aa17.21■□□□□ 0.35
PTPRK-208ENST00000392449 CARNMT1Q8N4J0 409 aa17.21■□□□□ 0.35
PTPRK-208ENST00000392449 ZNF606Q8WXB4 792 aa17.21■□□□□ 0.35
PTPRK-208ENST00000392449 DNASE2BQ8WZ79 361 aa17.21■□□□□ 0.35
PTPRK-208ENST00000392449 SNX19Q92543 992 aa17.21■□□□□ 0.35
PTPRK-208ENST00000392449 SLC39A13Q96H72 371 aa17.21■□□□□ 0.35
PTPRK-208ENST00000392449 SCNM1Q9BWG6 230 aa17.21■□□□□ 0.35
PTPRK-208ENST00000392449 SLC4A5Q9BY07 1137 aa17.21■□□□□ 0.35
PTPRK-208ENST00000392449 LHX5Q9H2C1 402 aa17.21■□□□□ 0.35
PTPRK-208ENST00000392449 SLC32A1Q9H598 525 aa17.21■□□□□ 0.35
PTPRK-208ENST00000392449 IL21RQ9HBE5 538 aa17.21■□□□□ 0.35
PTPRK-208ENST00000392449 RWDD2AQ9UIY3 292 aa17.21■□□□□ 0.35
PTPRK-208ENST00000392449 INTS6Q9UL03 887 aaKnown RBP17.21■□□□□ 0.35
PTPRK-208ENST00000392449 TLR6Q9Y2C9 796 aa17.21■□□□□ 0.35
PTPRK-208ENST00000392449 METTL12A8MUP2 240 aa17.2■□□□□ 0.34
PTPRK-208ENST00000392449 HYAL3O43820 417 aaPredicted RBP17.2■□□□□ 0.34
PTPRK-208ENST00000392449 GJB3O75712 270 aa17.2■□□□□ 0.34
PTPRK-208ENST00000392449 SYPP08247 313 aa17.2■□□□□ 0.34
PTPRK-208ENST00000392449 GNSP15586 552 aa17.2■□□□□ 0.34
PTPRK-208ENST00000392449 POLR2EP19388 210 aaKnown RBP17.2■□□□□ 0.34
PTPRK-208ENST00000392449 RPS14P62263 151 aaKnown RBP17.2■□□□□ 0.34
PTPRK-208ENST00000392449 BNC1Q01954 994 aa17.2■□□□□ 0.34
PTPRK-208ENST00000392449 ZC3H12AQ5D1E8 599 aaKnown RBP17.2■□□□□ 0.34
PTPRK-208ENST00000392449 MPP7Q5T2T1 576 aa17.2■□□□□ 0.34
PTPRK-208ENST00000392449 IRF2BP1Q8IU81 584 aa17.2■□□□□ 0.34
PTPRK-208ENST00000392449 PASD1Q8IV76 773 aa17.2■□□□□ 0.34
PTPRK-208ENST00000392449 HJURPQ8NCD3 748 aaPredicted RBP17.2■□□□□ 0.34
PTPRK-208ENST00000392449 CADM4Q8NFZ8 388 aa17.2■□□□□ 0.34
PTPRK-208ENST00000392449 MYO19Q96H55 970 aa17.2■□□□□ 0.34
PTPRK-208ENST00000392449 SERPINB11Q96P15 392 aa17.2■□□□□ 0.34
PTPRK-208ENST00000392449 NUP58Q9BVL2 599 aa17.2■□□□□ 0.34
PTPRK-208ENST00000392449 DNAAF2Q9NVR5 837 aaKnown RBP17.2■□□□□ 0.34
PTPRK-208ENST00000392449 SUSD2Q9UGT4 822 aa17.2■□□□□ 0.34
PTPRK-208ENST00000392449 IGF2RP11717 2491 aa17.2■□□□□ 0.34
PTPRK-208ENST00000392449 A0A1B0GTW7 788 aa17.19■□□□□ 0.34
PTPRK-208ENST00000392449 CAPN9O14815 690 aa17.19■□□□□ 0.34
PTPRK-208ENST00000392449 IRAK2O43187 625 aa17.19■□□□□ 0.34
PTPRK-208ENST00000392449 SH3BP5O60239 455 aa17.19■□□□□ 0.34
PTPRK-208ENST00000392449 PNMA6AP0CW24 399 aaPredicted RBP17.19■□□□□ 0.34
PTPRK-208ENST00000392449 OXTRP30559 389 aa17.19■□□□□ 0.34
PTPRK-208ENST00000392449 CSKP41240 450 aa17.19■□□□□ 0.34
PTPRK-208ENST00000392449 CTSOP43234 321 aaPredicted RBP17.19■□□□□ 0.34
PTPRK-208ENST00000392449 PDCLQ13371 301 aa17.19■□□□□ 0.34
PTPRK-208ENST00000392449 DCAF6Q58WW2 860 aa17.19■□□□□ 0.34
PTPRK-208ENST00000392449 MS4A13Q5J8X5 152 aa17.19■□□□□ 0.34
PTPRK-208ENST00000392449 RAP1GAP2Q684P5 730 aa17.19■□□□□ 0.34
PTPRK-208ENST00000392449 CIR1Q86X95 450 aaPredicted RBP17.19■□□□□ 0.34
PTPRK-208ENST00000392449 SYNJ2BP-COX16A0A087WUM0 186 aa17.18■□□□□ 0.34
PTPRK-208ENST00000392449 FAM170AA1A519 330 aa17.18■□□□□ 0.34
PTPRK-208ENST00000392449 UPK3BL1B0FP48 263 aa17.18■□□□□ 0.34
PTPRK-208ENST00000392449 UPK3BL2E5RIL1 263 aa17.18■□□□□ 0.34
PTPRK-208ENST00000392449 BCAT2O15382 392 aaPredicted RBP17.18■□□□□ 0.34
PTPRK-208ENST00000392449 MED7O43513 233 aa17.18■□□□□ 0.34
PTPRK-208ENST00000392449 ATP5BP06576 529 aaKnown RBP17.18■□□□□ 0.34
PTPRK-208ENST00000392449 ACADSBP45954 432 aa17.18■□□□□ 0.34
PTPRK-208ENST00000392449 UBE2HP62256 183 aa17.18■□□□□ 0.34
PTPRK-208ENST00000392449 LAYNQ6UX15 382 aa17.18■□□□□ 0.34
PTPRK-208ENST00000392449 UNQ6494/PRO21346Q6UXR6 183 aa17.18■□□□□ 0.34
PTPRK-208ENST00000392449 TMEM110Q86TL2 294 aa17.18■□□□□ 0.34
PTPRK-208ENST00000392449 LGI2Q8N0V4 545 aa17.18■□□□□ 0.34
PTPRK-208ENST00000392449 WDTC1Q8N5D0 677 aa17.18■□□□□ 0.34
PTPRK-208ENST00000392449 FIBINQ8TAL6 211 aa17.18■□□□□ 0.34
PTPRK-208ENST00000392449 AZIN2Q96A70 460 aa17.18■□□□□ 0.34
PTPRK-208ENST00000392449 MRGPRX3Q96LB0 322 aa17.18■□□□□ 0.34
PTPRK-208ENST00000392449 CPXM1Q96SM3 734 aa17.18■□□□□ 0.34
PTPRK-208ENST00000392449 TMEM121BQ9BXQ6 578 aaPredicted RBP17.18■□□□□ 0.34
PTPRK-208ENST00000392449 ADAM33Q9BZ11 813 aa17.18■□□□□ 0.34
PTPRK-208ENST00000392449 COX16Q9P0S2 106 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms