RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 PRDM12Q9H4Q4 367 aa11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 SNX10Q9Y5X0 201 aa11.8□□□□□ -0.52
SMARCAL1-203ENST00000392128 LAMA2P24043 3122 aaKnown RBP11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 A0A087WUV0 522 aaPredicted RBP11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 STK10O94804 968 aaKnown RBP11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 ZDHHC11BP0C7U3 371 aa11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 ATF6P18850 670 aa11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 OR1D2P34982 312 aa11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 TUFMP49411 452 aaKnown RBP11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 AP1B1Q10567 949 aa11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 BTG3Q14201 252 aaPredicted RBP11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 STAT4Q14765 748 aa11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 TNFAIP8L3Q5GJ75 292 aa11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 TMCO2Q7Z6W1 182 aaPredicted RBP11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 VPS52Q8N1B4 723 aa11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 PLCD3Q8N3E9 789 aa11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 NPWQ8N729 165 aa11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 COLGALT1Q8NBJ5 622 aa11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 P2RY11Q96G91 374 aa11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 ETNK1Q9HBU6 452 aa11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 AFF4Q9UHB7 1163 aaKnown RBP11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 NUDT5Q9UKK9 219 aa11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 ZMYND8Q9ULU4 1186 aaPredicted RBP11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 NOVA2Q9UNW9 492 aaKnown RBP11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 MRPL42Q9Y6G3 142 aaKnown RBP11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 SLC38A8A6NNN8 435 aa11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 RGS16O15492 202 aaPredicted RBP11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 FGF10O15520 208 aaPredicted RBP11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 OPHN1O60890 802 aa11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 AGTP01019 485 aa11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 IVLP07476 585 aa11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 RPL17P18621 184 aaKnown RBP11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 TPSB2P20231 275 aa11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 MX2P20592 715 aa11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 PPIDQ08752 370 aaKnown RBP11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 GALNT2Q10471 571 aa11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 TPSAB1Q15661 275 aa11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 MSS51Q4VC12 460 aa11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 ANKRD20A2Q5SQ80 823 aa11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 ANKRD20A1Q5TYW2 823 aa11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 ANKRD20A3Q5VUR7 823 aa11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 FAM117BQ6P1L5 589 aa11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 ARHGEF18Q6ZSZ5 1173 aa11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 MCUQ8NE86 351 aa11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 HDAC11Q96DB2 347 aa11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 FCRL2Q96LA5 508 aaPredicted RBP11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 C1orf74Q96LT6 269 aa11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 CLSTN3Q9BQT9 956 aa11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 CCDC77Q9BR77 488 aa11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 STMN4Q9H169 189 aaPredicted RBP11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 IL23AQ9NPF7 189 aa11.79□□□□□ -0.52
SMARCAL1-203ENST00000392128 TLDC2A0PJX2 215 aa11.78□□□□□ -0.52
SMARCAL1-203ENST00000392128 RNF103O00237 685 aa11.78□□□□□ -0.52
SMARCAL1-203ENST00000392128 ABLIM3O94929 683 aa11.78□□□□□ -0.52
SMARCAL1-203ENST00000392128 METTL18O95568 372 aa11.78□□□□□ -0.52
SMARCAL1-203ENST00000392128 TSHRP16473 764 aa11.78□□□□□ -0.52
SMARCAL1-203ENST00000392128 FDFT1P37268 417 aa11.78□□□□□ -0.52
SMARCAL1-203ENST00000392128 TBX4P57082 545 aa11.78□□□□□ -0.52
SMARCAL1-203ENST00000392128 DMTNQ08495 405 aa11.78□□□□□ -0.52
SMARCAL1-203ENST00000392128 SEMA5AQ13591 1074 aa11.78□□□□□ -0.52
SMARCAL1-203ENST00000392128 AUHQ13825 339 aaKnown RBP11.78□□□□□ -0.52
SMARCAL1-203ENST00000392128 LONRF1Q17RB8 773 aa11.78□□□□□ -0.52
SMARCAL1-203ENST00000392128 ARTNQ5T4W7 220 aa11.78□□□□□ -0.52
SMARCAL1-203ENST00000392128 RASIP1Q5U651 963 aa11.78□□□□□ -0.52
SMARCAL1-203ENST00000392128 TPGS2Q68CL5 300 aa11.78□□□□□ -0.52
SMARCAL1-203ENST00000392128 DDX53Q86TM3 631 aaKnown RBP11.78□□□□□ -0.52
SMARCAL1-203ENST00000392128 CCDC13Q8IYE1 715 aa11.78□□□□□ -0.52
SMARCAL1-203ENST00000392128 ARFGAP2Q8N6H7 521 aa11.78□□□□□ -0.52
SMARCAL1-203ENST00000392128 CCNYQ8ND76 341 aa11.78□□□□□ -0.52
SMARCAL1-203ENST00000392128 ZNF461Q8TAF7 563 aa11.78□□□□□ -0.52
SMARCAL1-203ENST00000392128 TBC1D31Q96DN5 1066 aa11.78□□□□□ -0.52
SMARCAL1-203ENST00000392128 SIK2Q9H0K1 926 aa11.78□□□□□ -0.52
SMARCAL1-203ENST00000392128 SPG21Q9NZD8 308 aa11.78□□□□□ -0.52
SMARCAL1-203ENST00000392128 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.78□□□□□ -0.52
SMARCAL1-203ENST00000392128 NUP205Q92621 2012 aa11.78□□□□□ -0.52
SMARCAL1-203ENST00000392128 A6NNZ2 444 aa11.78□□□□□ -0.52
SMARCAL1-203ENST00000392128 ACRP10323 421 aa11.78□□□□□ -0.52
SMARCAL1-203ENST00000392128 MAGOHP61326 146 aaKnown RBP11.78□□□□□ -0.52
SMARCAL1-203ENST00000392128 WASHC5Q12768 1159 aa11.78□□□□□ -0.52
SMARCAL1-203ENST00000392128 TRIP4Q15650 581 aaPredicted RBP11.78□□□□□ -0.52
SMARCAL1-203ENST00000392128 TUBB8Q3ZCM7 444 aa11.78□□□□□ -0.52
SMARCAL1-203ENST00000392128 FAXCQ5TGI0 409 aa11.78□□□□□ -0.52
SMARCAL1-203ENST00000392128 TP53INP2Q8IXH6 220 aa11.78□□□□□ -0.52
SMARCAL1-203ENST00000392128 ZNF276Q8N554 614 aa11.78□□□□□ -0.52
SMARCAL1-203ENST00000392128 ATP11CQ8NB49 1132 aa11.78□□□□□ -0.52
SMARCAL1-203ENST00000392128 GIPC2Q8TF65 315 aa11.78□□□□□ -0.52
SMARCAL1-203ENST00000392128 PYROXD1Q8WU10 500 aa11.78□□□□□ -0.52
SMARCAL1-203ENST00000392128 WDR83Q9BRX9 315 aaKnown RBP11.78□□□□□ -0.52
SMARCAL1-203ENST00000392128 UBE2OQ9C0C9 1292 aaKnown RBP11.78□□□□□ -0.52
SMARCAL1-203ENST00000392128 CATSPERBQ9H7T0 1116 aa11.78□□□□□ -0.52
SMARCAL1-203ENST00000392128 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.78□□□□□ -0.52
SMARCAL1-203ENST00000392128 HS3ST4Q9Y661 456 aa11.78□□□□□ -0.52
SMARCAL1-203ENST00000392128 DOCK4Q8N1I0 1966 aa11.77□□□□□ -0.52
SMARCAL1-203ENST00000392128 CLUHO75153 1309 aa11.77□□□□□ -0.52
SMARCAL1-203ENST00000392128 MYO18AQ92614 2054 aaKnown RBP11.77□□□□□ -0.52
SMARCAL1-203ENST00000392128 SMIM23A6NLE4 172 aa11.77□□□□□ -0.52
SMARCAL1-203ENST00000392128 E7EVH7 732 aa11.77□□□□□ -0.52
SMARCAL1-203ENST00000392128 C2CD2LO14523 706 aa11.77□□□□□ -0.52
SMARCAL1-203ENST00000392128 MTSS1O43312 755 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms