RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 WDCPQ9H6R7 721 aa16.5■□□□□ 0.23
SHANK1-204ENST00000391814 TOR4AQ9NXH8 423 aa16.5■□□□□ 0.23
SHANK1-204ENST00000391814 CRLS1Q9UJA2 301 aa16.5■□□□□ 0.23
SHANK1-204ENST00000391814 UMODL1Q5DID0 1318 aa16.5■□□□□ 0.23
SHANK1-204ENST00000391814 IGSF9BQ9UPX0 1349 aa16.5■□□□□ 0.23
SHANK1-204ENST00000391814 CYP2F1P24903 491 aa16.5■□□□□ 0.23
SHANK1-204ENST00000391814 RPS6KA3P51812 740 aa16.5■□□□□ 0.23
SHANK1-204ENST00000391814 PHACTR1Q9C0D0 580 aa16.5■□□□□ 0.23
SHANK1-204ENST00000391814 WDR12Q9GZL7 423 aaKnown RBP16.5■□□□□ 0.23
SHANK1-204ENST00000391814 NUDT5Q9UKK9 219 aa16.5■□□□□ 0.23
SHANK1-204ENST00000391814 VAV3Q9UKW4 847 aa16.5■□□□□ 0.23
SHANK1-204ENST00000391814 DGKBQ9Y6T7 804 aa16.5■□□□□ 0.23
SHANK1-204ENST00000391814 PRR23AA6NEV1 266 aa16.5■□□□□ 0.23
SHANK1-204ENST00000391814 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.5■□□□□ 0.23
SHANK1-204ENST00000391814 VPS26AO75436 327 aa16.5■□□□□ 0.23
SHANK1-204ENST00000391814 TPH1P17752 444 aa16.5■□□□□ 0.23
SHANK1-204ENST00000391814 LDLRAP1Q5SW96 308 aa16.5■□□□□ 0.23
SHANK1-204ENST00000391814 SLCO6A1Q86UG4 719 aa16.5■□□□□ 0.23
SHANK1-204ENST00000391814 CBWD2Q8IUF1 395 aa16.5■□□□□ 0.23
SHANK1-204ENST00000391814 TMCO1Q9UM00 188 aa16.5■□□□□ 0.23
SHANK1-204ENST00000391814 PADI4Q9UM07 663 aa16.5■□□□□ 0.23
SHANK1-204ENST00000391814 ABCC3O15438 1527 aa16.5■□□□□ 0.23
SHANK1-204ENST00000391814 ZSCAN5DPP0CG00 497 aa16.5■□□□□ 0.23
SHANK1-204ENST00000391814 GSTM5P46439 218 aa16.5■□□□□ 0.23
SHANK1-204ENST00000391814 NPY2RP49146 381 aa16.5■□□□□ 0.23
SHANK1-204ENST00000391814 KCNMB4Q86W47 210 aa16.5■□□□□ 0.23
SHANK1-204ENST00000391814 KIAA0895Q8NCT3 520 aa16.5■□□□□ 0.23
SHANK1-204ENST00000391814 CHST7Q9NS84 486 aa16.5■□□□□ 0.23
SHANK1-204ENST00000391814 ZNF221Q9UK13 617 aa16.5■□□□□ 0.23
SHANK1-204ENST00000391814 C15orf38-AP3S2A0A0A6YYH1 394 aa16.5■□□□□ 0.23
SHANK1-204ENST00000391814 ECE2O60344 883 aa16.5■□□□□ 0.23
SHANK1-204ENST00000391814 PLA2G6O60733 806 aa16.5■□□□□ 0.23
SHANK1-204ENST00000391814 IFNA14P01570 189 aa16.5■□□□□ 0.23
SHANK1-204ENST00000391814 ARPINQ7Z6K5 226 aa16.5■□□□□ 0.23
SHANK1-204ENST00000391814 SEPT12Q8IYM1 358 aa16.5■□□□□ 0.23
SHANK1-204ENST00000391814 DAGLBQ8NCG7 672 aa16.5■□□□□ 0.23
SHANK1-204ENST00000391814 CCDC59Q9P031 241 aaKnown RBP16.5■□□□□ 0.23
SHANK1-204ENST00000391814 NLRP1Q9C000 1473 aa16.5■□□□□ 0.23
SHANK1-204ENST00000391814 WARSP23381 471 aaKnown RBP16.5■□□□□ 0.23
SHANK1-204ENST00000391814 ARHGEF7Q14155 803 aa16.5■□□□□ 0.23
SHANK1-204ENST00000391814 C6orf52Q5T4I8 152 aa16.5■□□□□ 0.23
SHANK1-204ENST00000391814 CDC73Q6P1J9 531 aa16.5■□□□□ 0.23
SHANK1-204ENST00000391814 HIPK1Q86Z02 1210 aa16.5■□□□□ 0.23
SHANK1-204ENST00000391814 KRT78Q8N1N4 520 aa16.5■□□□□ 0.23
SHANK1-204ENST00000391814 FYNP06241 537 aa16.49■□□□□ 0.23
SHANK1-204ENST00000391814 SPANXN3Q5MJ09 141 aa16.49■□□□□ 0.23
SHANK1-204ENST00000391814 THOC7Q6I9Y2 204 aaKnown RBP16.49■□□□□ 0.23
SHANK1-204ENST00000391814 AMIGO2Q86SJ2 522 aa16.49■□□□□ 0.23
SHANK1-204ENST00000391814 SATL1Q86VE3 508 aa16.49■□□□□ 0.23
SHANK1-204ENST00000391814 OSBPL11Q9BXB4 747 aa16.49■□□□□ 0.23
SHANK1-204ENST00000391814 ACAD9Q9H845 621 aa16.49■□□□□ 0.23
SHANK1-204ENST00000391814 PCDHB8Q9UN66 801 aa16.49■□□□□ 0.23
SHANK1-204ENST00000391814 TPBGLP0DKB5 382 aa16.49■□□□□ 0.23
SHANK1-204ENST00000391814 SCNN1BP51168 640 aa16.49■□□□□ 0.23
SHANK1-204ENST00000391814 KRT74Q7RTS7 529 aa16.49■□□□□ 0.23
SHANK1-204ENST00000391814 ZNF540Q8NDQ6 660 aa16.49■□□□□ 0.23
SHANK1-204ENST00000391814 ZHX1-C8orf76Q96EF9 292 aa16.49■□□□□ 0.23
SHANK1-204ENST00000391814 C2orf81A6NN90 581 aa16.49■□□□□ 0.23
SHANK1-204ENST00000391814 TMEM62Q0P6H9 643 aa16.49■□□□□ 0.23
SHANK1-204ENST00000391814 SLC15A2Q16348 729 aa16.49■□□□□ 0.23
SHANK1-204ENST00000391814 XKR3Q5GH77 459 aa16.49■□□□□ 0.23
SHANK1-204ENST00000391814 MAGEC3Q8TD91 643 aa16.49■□□□□ 0.23
SHANK1-204ENST00000391814 CENPIQ92674 756 aaPredicted RBP16.49■□□□□ 0.23
SHANK1-204ENST00000391814 MTMR12Q9C0I1 747 aa16.49■□□□□ 0.23
SHANK1-204ENST00000391814 SMARCAD1Q9H4L7 1026 aa16.49■□□□□ 0.23
SHANK1-204ENST00000391814 KBTBD4Q9NVX7 518 aa16.49■□□□□ 0.23
SHANK1-204ENST00000391814 H3BN98 237 aa16.49■□□□□ 0.23
SHANK1-204ENST00000391814 DDX3XO00571 662 aaKnown RBP eCLIP16.49■□□□□ 0.23
SHANK1-204ENST00000391814 CCNT2O60583 730 aaKnown RBP16.49■□□□□ 0.23
SHANK1-204ENST00000391814 RGS20O76081 388 aa16.49■□□□□ 0.23
SHANK1-204ENST00000391814 RXRBP28702 533 aa16.49■□□□□ 0.23
SHANK1-204ENST00000391814 DSG3P32926 999 aa16.49■□□□□ 0.23
SHANK1-204ENST00000391814 NAA20P61599 178 aa16.49■□□□□ 0.23
SHANK1-204ENST00000391814 EPS8Q12929 822 aa16.49■□□□□ 0.23
SHANK1-204ENST00000391814 ROBO2Q9HCK4 1378 aa16.49■□□□□ 0.23
SHANK1-204ENST00000391814 GZMAP12544 262 aa16.49■□□□□ 0.23
SHANK1-204ENST00000391814 STX4Q12846 297 aa16.49■□□□□ 0.23
SHANK1-204ENST00000391814 C3orf67Q6ZVT6 689 aa16.49■□□□□ 0.23
SHANK1-204ENST00000391814 POLNQ7Z5Q5 900 aa16.49■□□□□ 0.23
SHANK1-204ENST00000391814 MYO1HQ8N1T3 1032 aa16.49■□□□□ 0.23
SHANK1-204ENST00000391814 OSBPL6Q9BZF3 934 aa16.49■□□□□ 0.23
SHANK1-204ENST00000391814 ARL8BQ9NVJ2 186 aa16.49■□□□□ 0.23
SHANK1-204ENST00000391814 SLC12A4Q9UP95 1085 aa16.49■□□□□ 0.23
SHANK1-204ENST00000391814 TDRKHQ9Y2W6 561 aaKnown RBP16.49■□□□□ 0.23
SHANK1-204ENST00000391814 CLTCL1P53675 1640 aa16.48■□□□□ 0.23
SHANK1-204ENST00000391814 MGAT4DA6NG13 374 aa16.48■□□□□ 0.23
SHANK1-204ENST00000391814 ABLIM1O14639 778 aa16.48■□□□□ 0.23
SHANK1-204ENST00000391814 RPL14P50914 215 aaKnown RBP16.48■□□□□ 0.23
SHANK1-204ENST00000391814 USP46P62068 366 aa16.48■□□□□ 0.23
SHANK1-204ENST00000391814 FGD3Q5JSP0 725 aa16.48■□□□□ 0.23
SHANK1-204ENST00000391814 RASSF6Q6ZTQ3 369 aa16.48■□□□□ 0.23
SHANK1-204ENST00000391814 SLFN11Q7Z7L1 901 aa16.48■□□□□ 0.23
SHANK1-204ENST00000391814 SLC4A5Q9BY07 1137 aa16.48■□□□□ 0.23
SHANK1-204ENST00000391814 SCUBE2Q9NQ36 999 aa16.48■□□□□ 0.23
SHANK1-204ENST00000391814 FBXO28Q9NVF7 368 aa16.48■□□□□ 0.23
SHANK1-204ENST00000391814 COG5Q9UP83 839 aa16.48■□□□□ 0.23
SHANK1-204ENST00000391814 A0A096LPK6 155 aa16.48■□□□□ 0.23
SHANK1-204ENST00000391814 GNG14A0A1W2PPG7 69 aa16.48■□□□□ 0.23
SHANK1-204ENST00000391814 PLOD3O60568 738 aa16.48■□□□□ 0.23
SHANK1-204ENST00000391814 MTFMTQ96DP5 389 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms