RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 FBXO28Q9NVF7 368 aa3.83□□□□□ -1.8
TRAV40-201ENST00000390467 UBE2J1Q9Y385 318 aaPredicted RBP3.83□□□□□ -1.8
TRAV40-201ENST00000390467 DTNAQ9Y4J8 743 aa3.83□□□□□ -1.8
TRAV40-201ENST00000390467 ZNF335Q9H4Z2 1342 aaPredicted RBP3.82□□□□□ -1.8
TRAV40-201ENST00000390467 PRPF4O43172 522 aaKnown RBP eCLIP3.82□□□□□ -1.8
TRAV40-201ENST00000390467 CNTN5O94779 1100 aa3.82□□□□□ -1.8
TRAV40-201ENST00000390467 SGPL1O95470 568 aa3.82□□□□□ -1.8
TRAV40-201ENST00000390467 TRIM27P14373 513 aa3.82□□□□□ -1.8
TRAV40-201ENST00000390467 TM4SF4P48230 202 aa3.82□□□□□ -1.8
TRAV40-201ENST00000390467 GPR162Q16538 588 aa3.82□□□□□ -1.8
TRAV40-201ENST00000390467 ZNF585BQ52M93 769 aa3.82□□□□□ -1.8
TRAV40-201ENST00000390467 GLE1Q53GS7 698 aaKnown RBP3.82□□□□□ -1.8
TRAV40-201ENST00000390467 C6orf10Q5SRN2 563 aa3.82□□□□□ -1.8
TRAV40-201ENST00000390467 RASGRP3Q8IV61 690 aa3.82□□□□□ -1.8
TRAV40-201ENST00000390467 KAT2AQ92830 837 aa3.82□□□□□ -1.8
TRAV40-201ENST00000390467 PAAF1Q9BRP4 392 aa3.82□□□□□ -1.8
TRAV40-201ENST00000390467 WDR83Q9BRX9 315 aaKnown RBP3.82□□□□□ -1.8
TRAV40-201ENST00000390467 ABHD14AQ9BUJ0 271 aa3.82□□□□□ -1.8
TRAV40-201ENST00000390467 EPS8L2Q9H6S3 715 aa3.82□□□□□ -1.8
TRAV40-201ENST00000390467 METTL14Q9HCE5 456 aaKnown RBP3.82□□□□□ -1.8
TRAV40-201ENST00000390467 SPAG4Q9NPE6 437 aa3.82□□□□□ -1.8
TRAV40-201ENST00000390467 IPO11Q9UI26 975 aaKnown RBP3.82□□□□□ -1.8
TRAV40-201ENST00000390467 ANAPC4Q9UJX5 808 aa3.82□□□□□ -1.8
TRAV40-201ENST00000390467 EVPLQ92817 2033 aa3.82□□□□□ -1.8
TRAV40-201ENST00000390467 LOC105369274A0A096LPK9 316 aa3.81□□□□□ -1.8
TRAV40-201ENST00000390467 LOC102723532A0A0G2JNH3 316 aa3.81□□□□□ -1.8
TRAV40-201ENST00000390467 RASA4BC9J798 803 aa3.81□□□□□ -1.8
TRAV40-201ENST00000390467 PRR23D1E9PI22 279 aaPredicted RBP3.81□□□□□ -1.8
TRAV40-201ENST00000390467 H0YGN5 161 aa3.81□□□□□ -1.8
TRAV40-201ENST00000390467 RHODO00212 210 aa3.81□□□□□ -1.8
TRAV40-201ENST00000390467 RASA4O43374 803 aa3.81□□□□□ -1.8
TRAV40-201ENST00000390467 ZC3H11AO75152 810 aaKnown RBP eCLIP3.81□□□□□ -1.8
TRAV40-201ENST00000390467 FGF18O76093 207 aa3.81□□□□□ -1.8
TRAV40-201ENST00000390467 PRR23D2P0DMB1 279 aaPredicted RBP3.81□□□□□ -1.8
TRAV40-201ENST00000390467 EEF1GP26641 437 aaKnown RBP3.81□□□□□ -1.8
TRAV40-201ENST00000390467 HOXA11P31270 313 aaPredicted RBP3.81□□□□□ -1.8
TRAV40-201ENST00000390467 SHC2P98077 582 aa3.81□□□□□ -1.8
TRAV40-201ENST00000390467 GAD2Q05329 585 aa3.81□□□□□ -1.8
TRAV40-201ENST00000390467 CBFBQ13951 182 aa3.81□□□□□ -1.8
TRAV40-201ENST00000390467 GRM4Q14833 912 aa3.81□□□□□ -1.8
TRAV40-201ENST00000390467 LONRF1Q17RB8 773 aa3.81□□□□□ -1.8
TRAV40-201ENST00000390467 FBXO38Q6PIJ6 1188 aa3.81□□□□□ -1.8
TRAV40-201ENST00000390467 LRIG3Q6UXM1 1119 aa3.81□□□□□ -1.8
TRAV40-201ENST00000390467 ADGRF3Q8IZF5 1079 aa3.81□□□□□ -1.8
TRAV40-201ENST00000390467 OR4N4Q8N0Y3 316 aa3.81□□□□□ -1.8
TRAV40-201ENST00000390467 IPO4Q8TEX9 1081 aaKnown RBP3.81□□□□□ -1.8
TRAV40-201ENST00000390467 RIPOR3Q96MK2 946 aa3.81□□□□□ -1.8
TRAV40-201ENST00000390467 EIF2AQ9BY44 585 aaKnown RBP3.81□□□□□ -1.8
TRAV40-201ENST00000390467 PRDM16Q9HAZ2 1276 aa3.81□□□□□ -1.8
TRAV40-201ENST00000390467 IL21RQ9HBE5 538 aa3.81□□□□□ -1.8
TRAV40-201ENST00000390467 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.81□□□□□ -1.8
TRAV40-201ENST00000390467 CHPF2Q9P2E5 772 aa3.81□□□□□ -1.8
TRAV40-201ENST00000390467 LAMP3Q9UQV4 416 aa3.81□□□□□ -1.8
TRAV40-201ENST00000390467 TRIP12Q14669 1992 aaPredicted RBP3.81□□□□□ -1.8
TRAV40-201ENST00000390467 PNMA6EA0A0J9YXQ4 647 aa3.8□□□□□ -1.8
TRAV40-201ENST00000390467 LACTBL1A8MY62 500 aa3.8□□□□□ -1.8
TRAV40-201ENST00000390467 TNFRSF13BO14836 293 aaPredicted RBP3.8□□□□□ -1.8
TRAV40-201ENST00000390467 CER1O95813 267 aa3.8□□□□□ -1.8
TRAV40-201ENST00000390467 NGFRP08138 427 aa3.8□□□□□ -1.8
TRAV40-201ENST00000390467 TGM2P21980 687 aa3.8□□□□□ -1.8
TRAV40-201ENST00000390467 FAM3BP58499 235 aaPredicted RBP3.8□□□□□ -1.8
TRAV40-201ENST00000390467 TAS2R50P59544 299 aa3.8□□□□□ -1.8
TRAV40-201ENST00000390467 CSHL1Q14406 222 aa3.8□□□□□ -1.8
TRAV40-201ENST00000390467 AAK1Q2M2I8 961 aa3.8□□□□□ -1.8
TRAV40-201ENST00000390467 MPEG1Q2M385 716 aa3.8□□□□□ -1.8
TRAV40-201ENST00000390467 DGKKQ5KSL6 1271 aa3.8□□□□□ -1.8
TRAV40-201ENST00000390467 ISM2Q6H9L7 571 aa3.8□□□□□ -1.8
TRAV40-201ENST00000390467 SLC39A5Q6ZMH5 540 aa3.8□□□□□ -1.8
TRAV40-201ENST00000390467 TRAPPC11Q7Z392 1133 aa3.8□□□□□ -1.8
TRAV40-201ENST00000390467 GPSM1Q86YR5 675 aa3.8□□□□□ -1.8
TRAV40-201ENST00000390467 PAQR4Q8N4S7 273 aaPredicted RBP3.8□□□□□ -1.8
TRAV40-201ENST00000390467 OR2C3Q8N628 320 aa3.8□□□□□ -1.8
TRAV40-201ENST00000390467 PJA1Q8NG27 643 aa3.8□□□□□ -1.8
TRAV40-201ENST00000390467 PARD3BQ8TEW8 1205 aa3.8□□□□□ -1.8
TRAV40-201ENST00000390467 INPP5DQ92835 1189 aa3.8□□□□□ -1.8
TRAV40-201ENST00000390467 PMM1Q92871 262 aa3.8□□□□□ -1.8
TRAV40-201ENST00000390467 MIB2Q96AX9 1013 aa3.8□□□□□ -1.8
TRAV40-201ENST00000390467 THOC3Q96J01 351 aaKnown RBP3.8□□□□□ -1.8
TRAV40-201ENST00000390467 C8orf48Q96LL4 319 aa3.8□□□□□ -1.8
TRAV40-201ENST00000390467 HTATIP2Q9BUP3 242 aa3.8□□□□□ -1.8
TRAV40-201ENST00000390467 FZD3Q9NPG1 666 aa3.8□□□□□ -1.8
TRAV40-201ENST00000390467 CA14Q9ULX7 337 aa3.8□□□□□ -1.8
TRAV40-201ENST00000390467 PROCRQ9UNN8 238 aa3.8□□□□□ -1.8
TRAV40-201ENST00000390467 PCDHGB2Q9Y5G2 931 aa3.8□□□□□ -1.8
TRAV40-201ENST00000390467 CXorf65A6NEN9 183 aa3.79□□□□□ -1.8
TRAV40-201ENST00000390467 C4orf47A7E2U8 309 aa3.79□□□□□ -1.8
TRAV40-201ENST00000390467 SPTLC2O15270 562 aa3.79□□□□□ -1.8
TRAV40-201ENST00000390467 NKX2-8O15522 239 aa3.79□□□□□ -1.8
TRAV40-201ENST00000390467 SLC28A2O43868 658 aa3.79□□□□□ -1.8
TRAV40-201ENST00000390467 RPP40O75818 363 aaKnown RBP3.79□□□□□ -1.8
TRAV40-201ENST00000390467 T-ENOLP0DO92 83 aa3.79□□□□□ -1.8
TRAV40-201ENST00000390467 TBXAS1P24557 533 aaPredicted RBP3.79□□□□□ -1.8
TRAV40-201ENST00000390467 KLRK1P26718 216 aa3.79□□□□□ -1.8
TRAV40-201ENST00000390467 CIITAP33076 1130 aa3.79□□□□□ -1.8
TRAV40-201ENST00000390467 HSPA7P48741 367 aa3.79□□□□□ -1.8
TRAV40-201ENST00000390467 PGGT1BP53609 377 aa3.79□□□□□ -1.8
TRAV40-201ENST00000390467 RAB30Q15771 203 aa3.79□□□□□ -1.8
TRAV40-201ENST00000390467 HMBOX1Q6NT76 420 aa3.79□□□□□ -1.8
TRAV40-201ENST00000390467 WDR93Q6P2C0 686 aa3.79□□□□□ -1.8
TRAV40-201ENST00000390467 RTL10Q7L3V2 364 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms