RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 GAD2Q05329 585 aa12.57□□□□□ -0.4
SPTBN1-203ENST00000389980 PLPP4Q5VZY2 271 aa12.57□□□□□ -0.4
SPTBN1-203ENST00000389980 HIBCHQ6NVY1 386 aaPredicted RBP12.57□□□□□ -0.4
SPTBN1-203ENST00000389980 TCEAL8Q8IYN2 117 aa12.57□□□□□ -0.4
SPTBN1-203ENST00000389980 GOLGA6L1Q8N7Z2 621 aa12.57□□□□□ -0.4
SPTBN1-203ENST00000389980 PHOSPHO2Q8TCD6 241 aa12.57□□□□□ -0.4
SPTBN1-203ENST00000389980 CCHCR1Q8TD31 782 aa12.57□□□□□ -0.4
SPTBN1-203ENST00000389980 ZIM3Q96PE6 472 aa12.57□□□□□ -0.4
SPTBN1-203ENST00000389980 HAPLN3Q96S86 360 aa12.57□□□□□ -0.4
SPTBN1-203ENST00000389980 TXLNGYQ9BZA5 131 aa12.57□□□□□ -0.4
SPTBN1-203ENST00000389980 ENTPD7Q9NQZ7 604 aa12.57□□□□□ -0.4
SPTBN1-203ENST00000389980 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.57□□□□□ -0.4
SPTBN1-203ENST00000389980 HSFX1Q9UBD0 423 aa12.57□□□□□ -0.4
SPTBN1-203ENST00000389980 TPX2Q9ULW0 747 aaKnown RBP12.57□□□□□ -0.4
SPTBN1-203ENST00000389980 TCRBV7S3A2A0A539 114 aa12.57□□□□□ -0.4
SPTBN1-203ENST00000389980 BCLAF3A2AJT9 711 aaKnown RBP12.57□□□□□ -0.4
SPTBN1-203ENST00000389980 GOLGA6BA6NDN3 693 aa12.57□□□□□ -0.4
SPTBN1-203ENST00000389980 GOLGA8MH3BSY2 632 aa12.57□□□□□ -0.4
SPTBN1-203ENST00000389980 PPFIA2O75334 1257 aa12.57□□□□□ -0.4
SPTBN1-203ENST00000389980 CHRM1P11229 460 aaPredicted RBP12.57□□□□□ -0.4
SPTBN1-203ENST00000389980 VAV1P15498 845 aa12.57□□□□□ -0.4
SPTBN1-203ENST00000389980 HCAR3P49019 387 aa12.57□□□□□ -0.4
SPTBN1-203ENST00000389980 KCNQ1P51787 676 aa12.57□□□□□ -0.4
SPTBN1-203ENST00000389980 AP1B1Q10567 949 aa12.57□□□□□ -0.4
SPTBN1-203ENST00000389980 PAFAH1B3Q15102 231 aaKnown RBP12.57□□□□□ -0.4
SPTBN1-203ENST00000389980 SLC45A4Q5BKX6 768 aa12.57□□□□□ -0.4
SPTBN1-203ENST00000389980 ANKRD22Q5VYY1 191 aa12.57□□□□□ -0.4
SPTBN1-203ENST00000389980 DNAJB7Q7Z6W7 309 aaPredicted RBP12.57□□□□□ -0.4
SPTBN1-203ENST00000389980 CCNYQ8ND76 341 aa12.57□□□□□ -0.4
SPTBN1-203ENST00000389980 OR2W6PQ8NHA6 318 aa12.57□□□□□ -0.4
SPTBN1-203ENST00000389980 CCDC110Q8TBZ0 833 aa12.57□□□□□ -0.4
SPTBN1-203ENST00000389980 DEPDC1BQ8WUY9 529 aa12.57□□□□□ -0.4
SPTBN1-203ENST00000389980 LRRC45Q96CN5 670 aa12.57□□□□□ -0.4
SPTBN1-203ENST00000389980 CELF6Q96J87 481 aaKnown RBP12.57□□□□□ -0.4
SPTBN1-203ENST00000389980 QKIQ96PU8 341 aaKnown RBP eCLIP12.57□□□□□ -0.44e-7■■■■□ 26.5
SPTBN1-203ENST00000389980 CEP41Q9BYV8 373 aa12.57□□□□□ -0.4
SPTBN1-203ENST00000389980 SEMA4AQ9H3S1 761 aa12.57□□□□□ -0.4
SPTBN1-203ENST00000389980 PRDM12Q9H4Q4 367 aa12.57□□□□□ -0.4
SPTBN1-203ENST00000389980 OLA1Q9NTK5 396 aaKnown RBP12.57□□□□□ -0.4
SPTBN1-203ENST00000389980 MPP6Q9NZW5 540 aa12.57□□□□□ -0.4
SPTBN1-203ENST00000389980 ADAM21Q9UKJ8 722 aa12.57□□□□□ -0.4
SPTBN1-203ENST00000389980 DOCK4Q8N1I0 1966 aa12.57□□□□□ -0.4
SPTBN1-203ENST00000389980 C2orf78A6NCI8 922 aa12.56□□□□□ -0.4
SPTBN1-203ENST00000389980 RNF40O75150 1001 aa12.56□□□□□ -0.4
SPTBN1-203ENST00000389980 IRAK1P51617 712 aa12.56□□□□□ -0.4
SPTBN1-203ENST00000389980 PMS2P54278 862 aa12.56□□□□□ -0.4
SPTBN1-203ENST00000389980 BASP1P80723 227 aaKnown RBP12.56□□□□□ -0.4
SPTBN1-203ENST00000389980 XRCC4Q13426 336 aa12.56□□□□□ -0.4
SPTBN1-203ENST00000389980 MTM1Q13496 603 aa12.56□□□□□ -0.4
SPTBN1-203ENST00000389980 VEPH1Q14D04 833 aa12.56□□□□□ -0.4
SPTBN1-203ENST00000389980 TRIP4Q15650 581 aaPredicted RBP12.56□□□□□ -0.4
SPTBN1-203ENST00000389980 CFAP58Q5T655 872 aa12.56□□□□□ -0.4
SPTBN1-203ENST00000389980 RNASEH2BQ5TBB1 312 aaKnown RBP12.56□□□□□ -0.4
SPTBN1-203ENST00000389980 FAXCQ5TGI0 409 aa12.56□□□□□ -0.4
SPTBN1-203ENST00000389980 CDKL3Q8IVW4 592 aaPredicted RBP12.56□□□□□ -0.4
SPTBN1-203ENST00000389980 IQCKQ8N0W5 287 aa12.56□□□□□ -0.4
SPTBN1-203ENST00000389980 TFB1MQ8WVM0 346 aaKnown RBP12.56□□□□□ -0.4
SPTBN1-203ENST00000389980 POF1BQ8WVV4 589 aa12.56□□□□□ -0.4
SPTBN1-203ENST00000389980 CPT1BQ92523 772 aa12.56□□□□□ -0.4
SPTBN1-203ENST00000389980 KLHL5Q96PQ7 755 aa12.56□□□□□ -0.4
SPTBN1-203ENST00000389980 NACA2Q9H009 215 aa12.56□□□□□ -0.4
SPTBN1-203ENST00000389980 ZNF334Q9HCZ1 680 aaPredicted RBP12.56□□□□□ -0.4
SPTBN1-203ENST00000389980 NDFIP2Q9NV92 336 aa12.56□□□□□ -0.4
SPTBN1-203ENST00000389980 VANGL2Q9ULK5 521 aa12.56□□□□□ -0.4
SPTBN1-203ENST00000389980 PLAAQ9Y263 795 aa12.56□□□□□ -0.4
SPTBN1-203ENST00000389980 E9PAM4 449 aa12.56□□□□□ -0.4
SPTBN1-203ENST00000389980 F5H423 210 aaPredicted RBP12.56□□□□□ -0.4
SPTBN1-203ENST00000389980 COCHO43405 550 aa12.56□□□□□ -0.4
SPTBN1-203ENST00000389980 APOEP02649 317 aa12.56□□□□□ -0.4
SPTBN1-203ENST00000389980 TUBP50607 506 aa12.56□□□□□ -0.4
SPTBN1-203ENST00000389980 EPHB3P54753 998 aa12.56□□□□□ -0.4
SPTBN1-203ENST00000389980 MANEALQ5VSG8 457 aa12.56□□□□□ -0.4
SPTBN1-203ENST00000389980 UHMK1Q8TAS1 419 aaKnown RBP12.56□□□□□ -0.4
SPTBN1-203ENST00000389980 SPPL3Q8TCT6 385 aa12.56□□□□□ -0.4
SPTBN1-203ENST00000389980 EXOC4Q96A65 974 aa12.56□□□□□ -0.4
SPTBN1-203ENST00000389980 MYRFLQ96LU7 910 aa12.56□□□□□ -0.4
SPTBN1-203ENST00000389980 CEP295NLQ96MC4 621 aa12.56□□□□□ -0.4
SPTBN1-203ENST00000389980 RNF38Q9H0F5 515 aa12.56□□□□□ -0.4
SPTBN1-203ENST00000389980 EPB41L4BQ9H329 900 aa12.56□□□□□ -0.4
SPTBN1-203ENST00000389980 LRRC4CQ9HCJ2 640 aa12.56□□□□□ -0.4
SPTBN1-203ENST00000389980 TRPM5Q9NZQ8 1165 aa12.56□□□□□ -0.4
SPTBN1-203ENST00000389980 SEPT10Q9P0V9 454 aa12.56□□□□□ -0.4
SPTBN1-203ENST00000389980 GOLGA6L7A0A1B0GV03 622 aa12.55□□□□□ -0.4
SPTBN1-203ENST00000389980 BANF1O75531 89 aa12.55□□□□□ -0.4
SPTBN1-203ENST00000389980 IRS1P35568 1242 aa12.55□□□□□ -0.4
SPTBN1-203ENST00000389980 ATP5C1P36542 298 aaKnown RBP12.55□□□□□ -0.4
SPTBN1-203ENST00000389980 MLLT6P55198 1093 aaPredicted RBP12.55□□□□□ -0.4
SPTBN1-203ENST00000389980 CAV1Q03135 178 aa12.55□□□□□ -0.4
SPTBN1-203ENST00000389980 SHHQ15465 462 aa12.55□□□□□ -0.4
SPTBN1-203ENST00000389980 MS4A13Q5J8X5 152 aa12.55□□□□□ -0.4
SPTBN1-203ENST00000389980 HP1BP3Q5SSJ5 553 aaPredicted RBP12.55□□□□□ -0.4
SPTBN1-203ENST00000389980 HECTD3Q5T447 861 aa12.55□□□□□ -0.4
SPTBN1-203ENST00000389980 RAP1GAP2Q684P5 730 aa12.55□□□□□ -0.4
SPTBN1-203ENST00000389980 HEATR6Q6AI08 1181 aaKnown RBP12.55□□□□□ -0.4
SPTBN1-203ENST00000389980 TMEM150AQ86TG1 271 aa12.55□□□□□ -0.4
SPTBN1-203ENST00000389980 BBOF1Q8ND07 529 aa12.55□□□□□ -0.4
SPTBN1-203ENST00000389980 PDZD8Q8NEN9 1154 aa12.55□□□□□ -0.4
SPTBN1-203ENST00000389980 MICAL1Q8TDZ2 1067 aa12.55□□□□□ -0.4
SPTBN1-203ENST00000389980 HTR3CQ8WXA8 447 aa12.55□□□□□ -0.4
SPTBN1-203ENST00000389980 PRCCQ92733 491 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms