RNA–Protein interactions for RNA: ENST00000389224.7

PDPK1-203, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 2 BASIC

Gene PDPK1, Length 2,416 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-203ENST00000389224 PGBD4Q96DM1 585 aa26.73■■□□□ 1.87
PDPK1-203ENST00000389224 UPF3AQ9H1J1 476 aaKnown RBP26.73■■□□□ 1.87
PDPK1-203ENST00000389224 RCOR3Q9P2K3 495 aaPredicted RBP26.73■■□□□ 1.87
PDPK1-203ENST00000389224 FBXW11Q9UKB1 542 aa26.73■■□□□ 1.87
PDPK1-203ENST00000389224 PCDHA11Q9Y5I1 949 aa26.73■■□□□ 1.87
PDPK1-203ENST00000389224 C2orf71A6NGG8 1288 aa26.72■■□□□ 1.87
PDPK1-203ENST00000389224 GSTA1P08263 222 aa26.72■■□□□ 1.87
PDPK1-203ENST00000389224 PRKAR2AP13861 404 aaKnown RBP26.72■■□□□ 1.87
PDPK1-203ENST00000389224 ELF3P78545 371 aaPredicted RBP26.72■■□□□ 1.87
PDPK1-203ENST00000389224 MRPL10Q7Z7H8 261 aaKnown RBP26.72■■□□□ 1.87
PDPK1-203ENST00000389224 GRAMD1AQ96CP6 724 aa26.72■■□□□ 1.87
PDPK1-203ENST00000389224 CELF6Q96J87 481 aaKnown RBP26.72■■□□□ 1.87
PDPK1-203ENST00000389224 GORASP1Q9BQQ3 440 aa26.72■■□□□ 1.87
PDPK1-203ENST00000389224 FRMD8Q9BZ67 464 aaPredicted RBP26.72■■□□□ 1.87
PDPK1-203ENST00000389224 CD248Q9HCU0 757 aa26.72■■□□□ 1.87
PDPK1-203ENST00000389224 PCMTD2Q9NV79 361 aa26.72■■□□□ 1.87
PDPK1-203ENST00000389224 SYBUQ9NX95 663 aa26.72■■□□□ 1.87
PDPK1-203ENST00000389224 INHBEP58166 350 aa26.71■■□□□ 1.87
PDPK1-203ENST00000389224 TAC4Q86UU9 113 aa26.71■■□□□ 1.87
PDPK1-203ENST00000389224 ARNTL2Q8WYA1 636 aa26.71■■□□□ 1.87
PDPK1-203ENST00000389224 STAMBPL1Q96FJ0 436 aa26.71■■□□□ 1.87
PDPK1-203ENST00000389224 LAMA3Q16787 3333 aa26.71■■□□□ 1.87
PDPK1-203ENST00000389224 HACD1B0YJ81 288 aa26.71■■□□□ 1.87
PDPK1-203ENST00000389224 COPEO14579 308 aa26.71■■□□□ 1.87
PDPK1-203ENST00000389224 SNRPAP09012 282 aaKnown RBP26.71■■□□□ 1.87
PDPK1-203ENST00000389224 SLC20A2Q08357 652 aa26.71■■□□□ 1.87
PDPK1-203ENST00000389224 SEMA3BQ13214 749 aa26.71■■□□□ 1.87
PDPK1-203ENST00000389224 PAFAH1B3Q15102 231 aaKnown RBP26.71■■□□□ 1.87
PDPK1-203ENST00000389224 PDK1Q15118 436 aa26.71■■□□□ 1.87
PDPK1-203ENST00000389224 ALKBH8Q96BT7 664 aaKnown RBP26.71■■□□□ 1.87
PDPK1-203ENST00000389224 ZNF395Q9H8N7 513 aaPredicted RBP26.71■■□□□ 1.87
PDPK1-203ENST00000389224 KANSL3Q9P2N6 904 aa26.71■■□□□ 1.87
PDPK1-203ENST00000389224 PSAT1Q9Y617 370 aa26.71■■□□□ 1.87
PDPK1-203ENST00000389224 A0A0U1RQF3 1178 aa26.7■■□□□ 1.87
PDPK1-203ENST00000389224 FAM159BA6NKW6 160 aa26.7■■□□□ 1.87
PDPK1-203ENST00000389224 FBXO21O94952 628 aa26.7■■□□□ 1.87
PDPK1-203ENST00000389224 NEFHP12036 1026 aa26.7■■□□□ 1.87
PDPK1-203ENST00000389224 GLUD2P49448 558 aa26.7■■□□□ 1.87
PDPK1-203ENST00000389224 IRX4P78413 519 aa26.7■■□□□ 1.87
PDPK1-203ENST00000389224 CES4AQ5XG92 561 aa26.7■■□□□ 1.87
PDPK1-203ENST00000389224 PSTKQ8IV42 348 aaKnown RBP26.7■■□□□ 1.87
PDPK1-203ENST00000389224 WDCPQ9H6R7 721 aa26.7■■□□□ 1.87
PDPK1-203ENST00000389224 XAB2Q9HCS7 855 aaKnown RBP26.7■■□□□ 1.87
PDPK1-203ENST00000389224 CCDC195A0A1B0GUA6 201 aa26.7■■□□□ 1.86
PDPK1-203ENST00000389224 TRDMT1O14717 391 aaKnown RBP26.7■■□□□ 1.86
PDPK1-203ENST00000389224 DHRS4L1P0CG22 281 aa26.7■■□□□ 1.86
PDPK1-203ENST00000389224 ODC1P11926 461 aa26.7■■□□□ 1.86
PDPK1-203ENST00000389224 ARMC2Q8NEN0 867 aa26.7■■□□□ 1.86
PDPK1-203ENST00000389224 TMEM237Q96Q45 408 aa26.7■■□□□ 1.86
PDPK1-203ENST00000389224 APOL2Q9BQE5 337 aa26.7■■□□□ 1.86
PDPK1-203ENST00000389224 RNF186Q9NXI6 227 aa26.7■■□□□ 1.86
PDPK1-203ENST00000389224 KLHL8Q9P2G9 620 aaPredicted RBP26.7■■□□□ 1.86
PDPK1-203ENST00000389224 OR12D3Q9UGF7 316 aa26.7■■□□□ 1.86
PDPK1-203ENST00000389224 NOD1Q9Y239 953 aa26.7■■□□□ 1.86
PDPK1-203ENST00000389224 TMEM88BA6NKF7 163 aa26.69■■□□□ 1.86
PDPK1-203ENST00000389224 A8MUI8 341 aa26.69■■□□□ 1.86
PDPK1-203ENST00000389224 KRT37O76014 449 aa26.69■■□□□ 1.86
PDPK1-203ENST00000389224 SRGAP2BP0DMP2 458 aa26.69■■□□□ 1.86
PDPK1-203ENST00000389224 PTPN3P26045 913 aa26.69■■□□□ 1.86
PDPK1-203ENST00000389224 PCSK1P29120 753 aa26.69■■□□□ 1.86
PDPK1-203ENST00000389224 SREBF2Q12772 1141 aa26.69■■□□□ 1.86
PDPK1-203ENST00000389224 OR52K1Q8NGK4 314 aa26.69■■□□□ 1.86
PDPK1-203ENST00000389224 LRRC39Q96DD0 335 aa26.69■■□□□ 1.86
PDPK1-203ENST00000389224 SIK2Q9H0K1 926 aa26.69■■□□□ 1.86
PDPK1-203ENST00000389224 UBP1Q9NZI7 540 aa26.69■■□□□ 1.86
PDPK1-203ENST00000389224 E2F8A0AVK6 867 aa26.69■■□□□ 1.86
PDPK1-203ENST00000389224 TARSP26639 723 aaKnown RBP26.69■■□□□ 1.86
PDPK1-203ENST00000389224 RPL9P32969 192 aaKnown RBP26.69■■□□□ 1.86
PDPK1-203ENST00000389224 DSC3Q14574 896 aa26.69■■□□□ 1.86
PDPK1-203ENST00000389224 INTS6LQ5JSJ4 861 aaKnown RBP26.69■■□□□ 1.86
PDPK1-203ENST00000389224 PARP9Q8IXQ6 854 aa26.69■■□□□ 1.86
PDPK1-203ENST00000389224 KLHL29Q96CT2 875 aa26.69■■□□□ 1.86
PDPK1-203ENST00000389224 VPS11Q9H270 941 aa26.69■■□□□ 1.86
PDPK1-203ENST00000389224 MOCS1Q9NZB8 636 aa26.69■■□□□ 1.86
PDPK1-203ENST00000389224 PTCH2Q9Y6C5 1203 aa26.69■■□□□ 1.86
PDPK1-203ENST00000389224 A0A0G2JND7 137 aa26.68■■□□□ 1.86
PDPK1-203ENST00000389224 OPHN1O60890 802 aa26.68■■□□□ 1.86
PDPK1-203ENST00000389224 LRIG2O94898 1065 aa26.68■■□□□ 1.86
PDPK1-203ENST00000389224 EPHB2P29323 1055 aa26.68■■□□□ 1.86
PDPK1-203ENST00000389224 FDFT1P37268 417 aa26.68■■□□□ 1.86
PDPK1-203ENST00000389224 SERPINB4P48594 390 aa26.68■■□□□ 1.86
PDPK1-203ENST00000389224 ZBTB17Q13105 803 aa26.68■■□□□ 1.86
PDPK1-203ENST00000389224 C4orf22Q6V702 233 aa26.68■■□□□ 1.86
PDPK1-203ENST00000389224 BZW1Q7L1Q6 419 aaKnown RBP26.68■■□□□ 1.86
PDPK1-203ENST00000389224 RNF34Q969K3 372 aa26.68■■□□□ 1.86
PDPK1-203ENST00000389224 PPP1R12AO14974 1030 aaPredicted RBP26.68■■□□□ 1.86
PDPK1-203ENST00000389224 ZBTB24O43167 697 aaPredicted RBP26.68■■□□□ 1.86
PDPK1-203ENST00000389224 KRT16P08779 473 aa26.68■■□□□ 1.86
PDPK1-203ENST00000389224 ALADP13716 330 aa26.68■■□□□ 1.86
PDPK1-203ENST00000389224 CBLBQ13191 982 aa26.68■■□□□ 1.86
PDPK1-203ENST00000389224 SDHAF4Q5VUM1 108 aa26.68■■□□□ 1.86
PDPK1-203ENST00000389224 CCSAPQ6IQ19 270 aaPredicted RBP26.68■■□□□ 1.86
PDPK1-203ENST00000389224 FAM171BQ6P995 826 aa26.68■■□□□ 1.86
PDPK1-203ENST00000389224 ZNF280BQ86YH2 543 aa26.68■■□□□ 1.86
PDPK1-203ENST00000389224 CSNK1G1Q9HCP0 422 aa26.68■■□□□ 1.86
PDPK1-203ENST00000389224 STK38LQ9Y2H1 464 aa26.68■■□□□ 1.86
PDPK1-203ENST00000389224 USH1CQ9Y6N9 552 aa26.68■■□□□ 1.86
PDPK1-203ENST00000389224 SDR42E2A6NKP2 422 aa26.67■■□□□ 1.86
PDPK1-203ENST00000389224 MSI1O43347 362 aaKnown RBP26.67■■□□□ 1.86
PDPK1-203ENST00000389224 ERVK-10P10266 1014 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms