RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 TAF5Q15542 800 aa19.36■□□□□ 0.69
CSPG5-202ENST00000383738 DDR2Q16832 855 aa19.36■□□□□ 0.69
CSPG5-202ENST00000383738 SYDE1Q6ZW31 735 aaPredicted RBP19.36■□□□□ 0.69
CSPG5-202ENST00000383738 CLNKQ7Z7G1 428 aa19.36■□□□□ 0.69
CSPG5-202ENST00000383738 MAB21L3Q8N8X9 362 aa19.36■□□□□ 0.69
CSPG5-202ENST00000383738 ZNF516Q92618 1163 aa19.36■□□□□ 0.69
CSPG5-202ENST00000383738 C22orf31O95567 290 aa19.35■□□□□ 0.69
CSPG5-202ENST00000383738 SNAI1O95863 264 aaPredicted RBP19.35■□□□□ 0.69
CSPG5-202ENST00000383738 MT-CO1P00395 513 aa19.35■□□□□ 0.69
CSPG5-202ENST00000383738 GJA5P36382 358 aa19.35■□□□□ 0.69
CSPG5-202ENST00000383738 CES3Q6UWW8 571 aa19.35■□□□□ 0.69
CSPG5-202ENST00000383738 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.35■□□□□ 0.69
CSPG5-202ENST00000383738 CFHP08603 1231 aa19.35■□□□□ 0.69
CSPG5-202ENST00000383738 TPH1P17752 444 aa19.35■□□□□ 0.69
CSPG5-202ENST00000383738 LHX1P48742 406 aa19.35■□□□□ 0.69
CSPG5-202ENST00000383738 TAS2R40P59535 323 aa19.35■□□□□ 0.69
CSPG5-202ENST00000383738 TRIM32Q13049 653 aa19.35■□□□□ 0.69
CSPG5-202ENST00000383738 DCAF12L1Q5VU92 463 aa19.35■□□□□ 0.69
CSPG5-202ENST00000383738 OTOP2Q7RTS6 562 aa19.35■□□□□ 0.69
CSPG5-202ENST00000383738 ASIC4Q96FT7 647 aa19.35■□□□□ 0.69
CSPG5-202ENST00000383738 ARHGEF3Q9NR81 526 aa19.35■□□□□ 0.69
CSPG5-202ENST00000383738 AFF4Q9UHB7 1163 aaKnown RBP19.35■□□□□ 0.69
CSPG5-202ENST00000383738 TSC22D4Q9Y3Q8 395 aa19.35■□□□□ 0.69
CSPG5-202ENST00000383738 HCRTO43612 131 aa19.35■□□□□ 0.69
CSPG5-202ENST00000383738 ELK3P41970 407 aa19.35■□□□□ 0.69
CSPG5-202ENST00000383738 CRYBB1P53674 252 aaPredicted RBP19.35■□□□□ 0.69
CSPG5-202ENST00000383738 FLOT2Q14254 428 aa19.35■□□□□ 0.69
CSPG5-202ENST00000383738 TAS2R42Q7RTR8 314 aa19.35■□□□□ 0.69
CSPG5-202ENST00000383738 SGF29Q96ES7 293 aa19.35■□□□□ 0.69
CSPG5-202ENST00000383738 CPXM1Q96SM3 734 aa19.35■□□□□ 0.69
CSPG5-202ENST00000383738 KIAA1257Q9ULG3 409 aa19.35■□□□□ 0.69
CSPG5-202ENST00000383738 C3orf70A6NLC5 250 aaPredicted RBP19.34■□□□□ 0.69
CSPG5-202ENST00000383738 SNRPAP09012 282 aaKnown RBP19.34■□□□□ 0.69
CSPG5-202ENST00000383738 MBTD1Q05BQ5 628 aa19.34■□□□□ 0.69
CSPG5-202ENST00000383738 ZC3H12AQ5D1E8 599 aaKnown RBP19.34■□□□□ 0.69
CSPG5-202ENST00000383738 VSTM1Q6UX27 236 aa19.34■□□□□ 0.69
CSPG5-202ENST00000383738 PTAR1Q7Z6K3 402 aaPredicted RBP19.34■□□□□ 0.69
CSPG5-202ENST00000383738 CACUL1Q86Y37 369 aa19.34■□□□□ 0.69
CSPG5-202ENST00000383738 TFAP2BQ92481 460 aa19.34■□□□□ 0.69
CSPG5-202ENST00000383738 PCYOX1Q9UHG3 505 aa19.34■□□□□ 0.69
CSPG5-202ENST00000383738 C4BPAP04003 597 aaKnown RBP19.34■□□□□ 0.69
CSPG5-202ENST00000383738 GALK1P51570 392 aa19.34■□□□□ 0.69
CSPG5-202ENST00000383738 NOMO3P69849 1222 aa19.34■□□□□ 0.69
CSPG5-202ENST00000383738 FAM183BPQ6ZVS7 135 aa19.34■□□□□ 0.69
CSPG5-202ENST00000383738 ATAD1Q8NBU5 361 aa19.34■□□□□ 0.69
CSPG5-202ENST00000383738 DIS3LQ8TF46 1054 aaKnown RBP19.34■□□□□ 0.69
CSPG5-202ENST00000383738 ZNF669Q96BR6 464 aaPredicted RBP19.34■□□□□ 0.69
CSPG5-202ENST00000383738 NMUR2Q9GZQ4 415 aa19.34■□□□□ 0.69
CSPG5-202ENST00000383738 A0A1B0GVG6 124 aa19.34■□□□□ 0.69
CSPG5-202ENST00000383738 TTC36A6NLP5 189 aa19.34■□□□□ 0.69
CSPG5-202ENST00000383738 DUSP11O75319 330 aaKnown RBP19.34■□□□□ 0.69
CSPG5-202ENST00000383738 FGFR1P11362 822 aa19.34■□□□□ 0.69
CSPG5-202ENST00000383738 ZFXP17010 805 aaPredicted RBP19.34■□□□□ 0.69
CSPG5-202ENST00000383738 UBAP2LQ14157 1087 aaKnown RBP19.34■□□□□ 0.69
CSPG5-202ENST00000383738 PTPN20Q4JDL3 420 aa19.34■□□□□ 0.69
CSPG5-202ENST00000383738 LRRC8EQ6NSJ5 796 aa19.34■□□□□ 0.69
CSPG5-202ENST00000383738 CDC26Q8NHZ8 85 aa19.34■□□□□ 0.69
CSPG5-202ENST00000383738 INPP5DQ92835 1189 aa19.34■□□□□ 0.69
CSPG5-202ENST00000383738 B3GALT6Q96L58 329 aa19.34■□□□□ 0.69
CSPG5-202ENST00000383738 LINGO3P0C6S8 592 aa19.33■□□□□ 0.69
CSPG5-202ENST00000383738 TMED10P49755 219 aaKnown RBP19.33■□□□□ 0.69
CSPG5-202ENST00000383738 RTP1P59025 263 aa19.33■□□□□ 0.69
CSPG5-202ENST00000383738 NRF1Q16656 503 aa19.33■□□□□ 0.69
CSPG5-202ENST00000383738 TRIM67Q6ZTA4 783 aa19.33■□□□□ 0.69
CSPG5-202ENST00000383738 B3GALNT2Q8NCR0 500 aa19.33■□□□□ 0.69
CSPG5-202ENST00000383738 ZSCAN18Q8TBC5 510 aaPredicted RBP19.33■□□□□ 0.69
CSPG5-202ENST00000383738 APOL5Q9BWW9 433 aa19.33■□□□□ 0.69
CSPG5-202ENST00000383738 PPEF2O14830 753 aa19.33■□□□□ 0.69
CSPG5-202ENST00000383738 ZBTB24O43167 697 aaPredicted RBP19.33■□□□□ 0.69
CSPG5-202ENST00000383738 EDF1O60869 148 aaKnown RBP19.33■□□□□ 0.69
CSPG5-202ENST00000383738 INHAP05111 366 aa19.33■□□□□ 0.69
CSPG5-202ENST00000383738 CYP2F1P24903 491 aa19.33■□□□□ 0.69
CSPG5-202ENST00000383738 CSE1LP55060 971 aaKnown RBP19.33■□□□□ 0.69
CSPG5-202ENST00000383738 WDR4P57081 412 aaKnown RBP19.33■□□□□ 0.69
CSPG5-202ENST00000383738 PPIDQ08752 370 aaKnown RBP19.33■□□□□ 0.69
CSPG5-202ENST00000383738 ATP1A4Q13733 1029 aa19.33■□□□□ 0.69
CSPG5-202ENST00000383738 MPP2Q14168 576 aa19.33■□□□□ 0.69
CSPG5-202ENST00000383738 FSCBQ5H9T9 825 aa19.33■□□□□ 0.69
CSPG5-202ENST00000383738 ZNF280DQ6N043 979 aa19.33■□□□□ 0.69
CSPG5-202ENST00000383738 TMPRSS6Q8IU80 811 aa19.33■□□□□ 0.69
CSPG5-202ENST00000383738 ZNF518BQ9C0D4 1074 aa19.33■□□□□ 0.69
CSPG5-202ENST00000383738 ENTPD7Q9NQZ7 604 aa19.33■□□□□ 0.69
CSPG5-202ENST00000383738 STARD13Q9Y3M8 1113 aa19.33■□□□□ 0.69
CSPG5-202ENST00000383738 GOLGA8TH3BQL2 631 aa19.33■□□□□ 0.68
CSPG5-202ENST00000383738 TRDMT1O14717 391 aaKnown RBP19.33■□□□□ 0.68
CSPG5-202ENST00000383738 GSC2O15499 205 aa19.33■□□□□ 0.68
CSPG5-202ENST00000383738 MSCO60682 206 aa19.33■□□□□ 0.68
CSPG5-202ENST00000383738 PEX11AO75192 247 aa19.33■□□□□ 0.68
CSPG5-202ENST00000383738 ACSBG2Q5FVE4 666 aa19.33■□□□□ 0.68
CSPG5-202ENST00000383738 SLC39A4Q6P5W5 647 aa19.33■□□□□ 0.68
CSPG5-202ENST00000383738 RASGEF1CQ8N431 466 aa19.33■□□□□ 0.68
CSPG5-202ENST00000383738 ARL10Q8N8L6 244 aa19.33■□□□□ 0.68
CSPG5-202ENST00000383738 DPEP3Q9H4B8 488 aa19.33■□□□□ 0.68
CSPG5-202ENST00000383738 TBX10O75333 385 aa19.33■□□□□ 0.68
CSPG5-202ENST00000383738 HMGCRP04035 888 aa19.33■□□□□ 0.68
CSPG5-202ENST00000383738 PAEPP09466 180 aa19.33■□□□□ 0.68
CSPG5-202ENST00000383738 MYL4P12829 197 aa19.33■□□□□ 0.68
CSPG5-202ENST00000383738 LMO2P25791 158 aa19.33■□□□□ 0.68
CSPG5-202ENST00000383738 HARS2P49590 506 aaKnown RBP19.33■□□□□ 0.68
CSPG5-202ENST00000383738 SLC45A4Q5BKX6 768 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms