RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 PRKAA2P54646 552 aa14.3□□□□□ -0.12
SNPH-201ENST00000381867 SETD9Q8NE22 299 aa14.3□□□□□ -0.12
SNPH-201ENST00000381867 DEPDC7Q96QD5 511 aa14.3□□□□□ -0.12
SNPH-201ENST00000381867 REXO4Q9GZR2 422 aaKnown RBP14.3□□□□□ -0.12
SNPH-201ENST00000381867 CLEC4MQ9H2X3 399 aaPredicted RBP14.3□□□□□ -0.12
SNPH-201ENST00000381867 HMX1Q9NP08 348 aaPredicted RBP14.3□□□□□ -0.12
SNPH-201ENST00000381867 ABI2Q9NYB9 513 aaPredicted RBP14.3□□□□□ -0.12
SNPH-201ENST00000381867 DPP7Q9UHL4 492 aa14.3□□□□□ -0.12
SNPH-201ENST00000381867 SPATA2Q9UM82 520 aa14.3□□□□□ -0.12
SNPH-201ENST00000381867 UBIAD1Q9Y5Z9 338 aa14.3□□□□□ -0.12
SNPH-201ENST00000381867 ZSCAN5CA6NGD5 496 aaPredicted RBP14.3□□□□□ -0.12
SNPH-201ENST00000381867 NCF1BA6NI72 391 aaPredicted RBP14.3□□□□□ -0.12
SNPH-201ENST00000381867 UNCXA6NJT0 531 aa14.3□□□□□ -0.12
SNPH-201ENST00000381867 NCF1CA8MVU1 366 aaPredicted RBP14.3□□□□□ -0.12
SNPH-201ENST00000381867 LSM8O95777 96 aaKnown RBP14.3□□□□□ -0.12
SNPH-201ENST00000381867 NCF1P14598 390 aaPredicted RBP14.3□□□□□ -0.12
SNPH-201ENST00000381867 ME2P23368 584 aa14.3□□□□□ -0.12
SNPH-201ENST00000381867 CASP4P49662 377 aa14.3□□□□□ -0.12
SNPH-201ENST00000381867 PSEN2P49810 448 aa14.3□□□□□ -0.12
SNPH-201ENST00000381867 PDZK1Q5T2W1 519 aa14.3□□□□□ -0.12
SNPH-201ENST00000381867 TDRD10Q5VZ19 366 aaKnown RBP14.3□□□□□ -0.12
SNPH-201ENST00000381867 TIGD7Q6NT04 549 aaPredicted RBP14.3□□□□□ -0.12
SNPH-201ENST00000381867 TRPM4Q8TD43 1214 aa14.3□□□□□ -0.12
SNPH-201ENST00000381867 WDCPQ9H6R7 721 aa14.3□□□□□ -0.12
SNPH-201ENST00000381867 NRDE2Q9H7Z3 1164 aa14.3□□□□□ -0.12
SNPH-201ENST00000381867 RNPEPL1Q9HAU8 725 aa14.3□□□□□ -0.12
SNPH-201ENST00000381867 DDIT4Q9NX09 232 aa14.3□□□□□ -0.12
SNPH-201ENST00000381867 NINJ2Q9NZG7 142 aa14.3□□□□□ -0.12
SNPH-201ENST00000381867 C6orf203Q9P0P8 240 aaPredicted RBP14.3□□□□□ -0.12
SNPH-201ENST00000381867 CENPXA8MT69 81 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 CBX6O95503 412 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 RPS7P62081 194 aaKnown RBP14.29□□□□□ -0.12
SNPH-201ENST00000381867 IFI35P80217 286 aaPredicted RBP14.29□□□□□ -0.12
SNPH-201ENST00000381867 MTA1Q13330 715 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 PGS1Q32NB8 556 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 C2CD6Q53TS8 623 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 ARMC3Q5W041 872 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 TSHZ1Q6ZSZ6 1077 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 CBWD2Q8IUF1 395 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 SERHL2Q9H4I8 314 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 ASB7Q9H672 318 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 SERHLQ9NQF3 203 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 PLIN4Q96Q06 1357 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 PIPSLA2A3N6 862 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 FAM86B1E9PN63 330 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 MAP3K6O95382 1288 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 FAM86B2P0C5J1 330 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 INSRRP14616 1297 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 PIK3R1P27986 724 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 CENPAP49450 140 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 TMEM132BQ14DG7 1078 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 CHMP1BQ7LBR1 199 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 EID3Q8N140 333 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 SLC20A1Q8WUM9 679 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 ASZ1Q8WWH4 475 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 TINF2Q9BSI4 451 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 C9orf16Q9BUW7 83 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 GPAMQ9HCL2 828 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 XPNPEP3Q9NQH7 507 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 TPRKBQ9Y3C4 175 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 C2CD2Q9Y426 696 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 TBKBP1A7MCY6 615 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 ZBTB48P10074 688 aaPredicted RBP14.29□□□□□ -0.12
SNPH-201ENST00000381867 LHX1P48742 406 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 ATN1P54259 1190 aaPredicted RBP14.29□□□□□ -0.12
SNPH-201ENST00000381867 CYP24A1Q07973 514 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 DDX39BQ13838 428 aaKnown RBP14.29□□□□□ -0.12
SNPH-201ENST00000381867 SLC9A5Q14940 896 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 FAM172AQ8WUF8 416 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 RNFT2Q96EX2 444 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 APBA2Q99767 749 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 HDHD2Q9H0R4 259 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 HMG20AQ9NP66 347 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 KCNMB3Q9NPA1 279 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 KLK14Q9P0G3 267 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 POLG2Q9UHN1 485 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 MAP2K7O14733 419 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 CSHL1Q14406 222 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 MYO1HQ8N1T3 1032 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 ATP6V0D2Q8N8Y2 350 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 HDAC7Q8WUI4 952 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 ZNF75CPQ92670 426 aaPredicted RBP14.29□□□□□ -0.12
SNPH-201ENST00000381867 MTMR9Q96QG7 549 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 SEPHS2Q99611 448 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 SMAD5Q99717 465 aaKnown RBP14.29□□□□□ -0.12
SNPH-201ENST00000381867 SYT17Q9BSW7 474 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 ENTPD7Q9NQZ7 604 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 RGS18Q9NS28 235 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 USP18Q9UMW8 372 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 LTBP3Q9NS15 1303 aa14.29□□□□□ -0.12
SNPH-201ENST00000381867 SNPHO15079 494 aa14.28□□□□□ -0.12
SNPH-201ENST00000381867 CDC16Q13042 620 aa14.28□□□□□ -0.12
SNPH-201ENST00000381867 NDUFA5Q16718 116 aa14.28□□□□□ -0.12
SNPH-201ENST00000381867 PAN2Q504Q3 1202 aaKnown RBP14.28□□□□□ -0.12
SNPH-201ENST00000381867 CENPTQ96BT3 561 aa14.28□□□□□ -0.12
SNPH-201ENST00000381867 APOL4Q9BPW4 351 aa14.28□□□□□ -0.12
SNPH-201ENST00000381867 SRRM3A6NNA2 597 aaPredicted RBP14.28□□□□□ -0.12
SNPH-201ENST00000381867 IRF6O14896 467 aa14.28□□□□□ -0.12
SNPH-201ENST00000381867 SLITRK3O94933 977 aa14.28□□□□□ -0.12
SNPH-201ENST00000381867 ITGA9Q13797 1035 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms