RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 SETSIPP0DME0 302 aa16.65■□□□□ 0.26
VCX3A-201ENST00000381089 CD19P15391 556 aa16.65■□□□□ 0.26
VCX3A-201ENST00000381089 CYP4F3Q08477 520 aa16.65■□□□□ 0.26
VCX3A-201ENST00000381089 NUMA1Q14980 2115 aa16.65■□□□□ 0.26
VCX3A-201ENST00000381089 SMAD1Q15797 465 aaKnown RBP16.65■□□□□ 0.26
VCX3A-201ENST00000381089 MPP7Q5T2T1 576 aa16.65■□□□□ 0.26
VCX3A-201ENST00000381089 NUGGCQ68CJ6 796 aa16.65■□□□□ 0.26
VCX3A-201ENST00000381089 USP30Q70CQ3 517 aa16.65■□□□□ 0.26
VCX3A-201ENST00000381089 KIAA0907Q7Z7F0 614 aaPredicted RBP16.65■□□□□ 0.26
VCX3A-201ENST00000381089 EDEM1Q92611 657 aa16.65■□□□□ 0.26
VCX3A-201ENST00000381089 SPATA32Q96LK8 384 aa16.65■□□□□ 0.26
VCX3A-201ENST00000381089 CNGB3Q9NQW8 809 aa16.65■□□□□ 0.26
VCX3A-201ENST00000381089 LOC400499M0QZD8 3231 aa16.64■□□□□ 0.26
VCX3A-201ENST00000381089 H0Y8X5 98 aa16.64■□□□□ 0.25
VCX3A-201ENST00000381089 CDK4P11802 303 aa16.64■□□□□ 0.25
VCX3A-201ENST00000381089 CTSKP43235 329 aa16.64■□□□□ 0.25
VCX3A-201ENST00000381089 RACK1P63244 317 aaKnown RBP16.64■□□□□ 0.25
VCX3A-201ENST00000381089 DPYDQ12882 1025 aa16.64■□□□□ 0.25
VCX3A-201ENST00000381089 PTPRNQ16849 979 aa16.64■□□□□ 0.25
VCX3A-201ENST00000381089 TCERG1LQ5VWI1 586 aa16.64■□□□□ 0.25
VCX3A-201ENST00000381089 KIAA0895LQ68EN5 471 aa16.64■□□□□ 0.25
VCX3A-201ENST00000381089 SCUBE3Q8IX30 993 aa16.64■□□□□ 0.25
VCX3A-201ENST00000381089 KCTD13Q8WZ19 329 aa16.64■□□□□ 0.25
VCX3A-201ENST00000381089 NDRG1Q92597 394 aaKnown RBP16.64■□□□□ 0.25
VCX3A-201ENST00000381089 TATDN2Q93075 761 aa16.64■□□□□ 0.25
VCX3A-201ENST00000381089 DDX50Q9BQ39 737 aaKnown RBP16.64■□□□□ 0.25
VCX3A-201ENST00000381089 KIAA1257Q9ULG3 409 aa16.64■□□□□ 0.25
VCX3A-201ENST00000381089 SLCO1B1Q9Y6L6 691 aa16.64■□□□□ 0.25
VCX3A-201ENST00000381089 CELSR3Q9NYQ7 3312 aa16.63■□□□□ 0.25
VCX3A-201ENST00000381089 TMEM131Q92545 1883 aa16.63■□□□□ 0.25
VCX3A-201ENST00000381089 FAM47DPA6NHR8 397 aa16.63■□□□□ 0.25
VCX3A-201ENST00000381089 LRRC72A6NJI9 287 aa16.63■□□□□ 0.25
VCX3A-201ENST00000381089 YJEFN3A6XGL0 299 aa16.63■□□□□ 0.25
VCX3A-201ENST00000381089 E7ENQ6 273 aa16.63■□□□□ 0.25
VCX3A-201ENST00000381089 TULP2O00295 520 aa16.63■□□□□ 0.25
VCX3A-201ENST00000381089 PAPSS1O43252 624 aaPredicted RBP16.63■□□□□ 0.25
VCX3A-201ENST00000381089 TBL1XO60907 577 aa16.63■□□□□ 0.25
VCX3A-201ENST00000381089 ASLP04424 464 aa16.63■□□□□ 0.25
VCX3A-201ENST00000381089 PRR29P0C7W0 189 aa16.63■□□□□ 0.25
VCX3A-201ENST00000381089 VDRP11473 427 aa16.63■□□□□ 0.25
VCX3A-201ENST00000381089 HNF1BP35680 557 aa16.63■□□□□ 0.25
VCX3A-201ENST00000381089 MCCD1P59942 119 aaPredicted RBP16.63■□□□□ 0.25
VCX3A-201ENST00000381089 KRT85P78386 507 aa16.63■□□□□ 0.25
VCX3A-201ENST00000381089 CUL2Q13617 745 aa16.63■□□□□ 0.25
VCX3A-201ENST00000381089 DCAF17Q5H9S7 520 aaPredicted RBP16.63■□□□□ 0.25
VCX3A-201ENST00000381089 LAYNQ6UX15 382 aa16.63■□□□□ 0.25
VCX3A-201ENST00000381089 BHLHA9Q7RTU4 235 aa16.63■□□□□ 0.25
VCX3A-201ENST00000381089 TMPRSS12Q86WS5 348 aa16.63■□□□□ 0.25
VCX3A-201ENST00000381089 MFN1Q8IWA4 741 aa16.63■□□□□ 0.25
VCX3A-201ENST00000381089 SCML4Q8N228 414 aa16.63■□□□□ 0.25
VCX3A-201ENST00000381089 RSPH9Q9H1X1 276 aaPredicted RBP16.63■□□□□ 0.25
VCX3A-201ENST00000381089 PABPC3Q9H361 631 aaKnown RBP16.63■□□□□ 0.25
VCX3A-201ENST00000381089 FBXL12Q9NXK8 326 aa16.63■□□□□ 0.25
VCX3A-201ENST00000381089 MUC22E2RYF6 1773 aaPredicted RBP16.62■□□□□ 0.25
VCX3A-201ENST00000381089 IGSF10Q6WRI0 2623 aa16.62■□□□□ 0.25
VCX3A-201ENST00000381089 FAM149AA5PLN7 773 aa16.62■□□□□ 0.25
VCX3A-201ENST00000381089 KCNK3O14649 394 aa16.62■□□□□ 0.25
VCX3A-201ENST00000381089 VILLO15195 856 aa16.62■□□□□ 0.25
VCX3A-201ENST00000381089 YKT6O15498 198 aa16.62■□□□□ 0.25
VCX3A-201ENST00000381089 MSI1O43347 362 aaKnown RBP16.62■□□□□ 0.25
VCX3A-201ENST00000381089 LCP1P13796 627 aa16.62■□□□□ 0.25
VCX3A-201ENST00000381089 ABCB4P21439 1286 aa16.62■□□□□ 0.25
VCX3A-201ENST00000381089 TBXAS1P24557 533 aaPredicted RBP16.62■□□□□ 0.25
VCX3A-201ENST00000381089 NDUFA8P51970 172 aa16.62■□□□□ 0.25
VCX3A-201ENST00000381089 IL9RQ01113 521 aa16.62■□□□□ 0.25
VCX3A-201ENST00000381089 ZCWPW2Q504Y3 356 aa16.62■□□□□ 0.25
VCX3A-201ENST00000381089 PIK3R6Q5UE93 754 aa16.62■□□□□ 0.25
VCX3A-201ENST00000381089 MSANTD2Q6P1R3 559 aa16.62■□□□□ 0.25
VCX3A-201ENST00000381089 DHRS13Q6UX07 377 aa16.62■□□□□ 0.25
VCX3A-201ENST00000381089 HJURPQ8NCD3 748 aaPredicted RBP16.62■□□□□ 0.25
VCX3A-201ENST00000381089 UBA3Q8TBC4 463 aa16.62■□□□□ 0.25
VCX3A-201ENST00000381089 IRGQQ8WZA9 623 aa16.62■□□□□ 0.25
VCX3A-201ENST00000381089 NXPE2Q96DL1 559 aa16.62■□□□□ 0.25
VCX3A-201ENST00000381089 TSG101Q99816 390 aa16.62■□□□□ 0.25
VCX3A-201ENST00000381089 TPX2Q9ULW0 747 aaKnown RBP16.62■□□□□ 0.25
VCX3A-201ENST00000381089 PCDHGA1Q9Y5H4 931 aa16.62■□□□□ 0.25
VCX3A-201ENST00000381089 A0A087WV48 116 aa16.61■□□□□ 0.25
VCX3A-201ENST00000381089 A0A1B0GTQ1 180 aa16.61■□□□□ 0.25
VCX3A-201ENST00000381089 A0A1W2PPC4 97 aa16.61■□□□□ 0.25
VCX3A-201ENST00000381089 ACSL4O60488 711 aa16.61■□□□□ 0.25
VCX3A-201ENST00000381089 MOCS3O95396 460 aa16.61■□□□□ 0.25
VCX3A-201ENST00000381089 ITGAVP06756 1048 aa16.61■□□□□ 0.25
VCX3A-201ENST00000381089 CD70P32970 193 aa16.61■□□□□ 0.25
VCX3A-201ENST00000381089 DAOAP59103 153 aa16.61■□□□□ 0.25
VCX3A-201ENST00000381089 CAMK2BQ13554 666 aa16.61■□□□□ 0.25
VCX3A-201ENST00000381089 PKP1Q13835 747 aa16.61■□□□□ 0.25
VCX3A-201ENST00000381089 HNRNPA1L2Q32P51 320 aaKnown RBP16.61■□□□□ 0.25
VCX3A-201ENST00000381089 SLC45A4Q5BKX6 768 aa16.61■□□□□ 0.25
VCX3A-201ENST00000381089 C6orf118Q5T5N4 469 aa16.61■□□□□ 0.25
VCX3A-201ENST00000381089 RFWD3Q6PCD5 774 aa16.61■□□□□ 0.25
VCX3A-201ENST00000381089 KRBA2Q6ZNG9 492 aa16.61■□□□□ 0.25
VCX3A-201ENST00000381089 KDM1BQ8NB78 822 aa16.61■□□□□ 0.25
VCX3A-201ENST00000381089 FIBINQ8TAL6 211 aa16.61■□□□□ 0.25
VCX3A-201ENST00000381089 AZIN2Q96A70 460 aa16.61■□□□□ 0.25
VCX3A-201ENST00000381089 EEF2KMTQ96G04 330 aa16.61■□□□□ 0.25
VCX3A-201ENST00000381089 ELF4Q99607 663 aaPredicted RBP16.61■□□□□ 0.25
VCX3A-201ENST00000381089 OMDQ99983 421 aa16.61■□□□□ 0.25
VCX3A-201ENST00000381089 AASDHPPTQ9NRN7 309 aa16.61■□□□□ 0.25
VCX3A-201ENST00000381089 STIM2Q9P246 746 aa16.61■□□□□ 0.25
VCX3A-201ENST00000381089 FAM237AA0A1B0GTK4 181 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms