RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 EHHADHQ08426 723 aa18.08■□□□□ 0.48
HMGN1-203ENST00000380748 INCA1Q0VD86 236 aa18.08■□□□□ 0.48
HMGN1-203ENST00000380748 RABEP1Q15276 862 aa18.08■□□□□ 0.48
HMGN1-203ENST00000380748 PLD4Q96BZ4 506 aa18.08■□□□□ 0.48
HMGN1-203ENST00000380748 DUSP16Q9BY84 665 aa18.08■□□□□ 0.48
HMGN1-203ENST00000380748 SUN2Q9UH99 717 aa18.08■□□□□ 0.48
HMGN1-203ENST00000380748 LRRC72A6NJI9 287 aa18.07■□□□□ 0.48
HMGN1-203ENST00000380748 C10orf142B7Z368 130 aa18.07■□□□□ 0.48
HMGN1-203ENST00000380748 TLR4O00206 839 aa18.07■□□□□ 0.48
HMGN1-203ENST00000380748 SLC28A2O43868 658 aa18.07■□□□□ 0.48
HMGN1-203ENST00000380748 RNASEH2AO75792 299 aaKnown RBP18.07■□□□□ 0.48
HMGN1-203ENST00000380748 ASS1P00966 412 aaKnown RBP18.07■□□□□ 0.48
HMGN1-203ENST00000380748 MPOP05164 745 aa18.07■□□□□ 0.48
HMGN1-203ENST00000380748 ATP5BP06576 529 aaKnown RBP18.07■□□□□ 0.48
HMGN1-203ENST00000380748 ACP1P24666 158 aa18.07■□□□□ 0.48
HMGN1-203ENST00000380748 RXRGP48443 463 aa18.07■□□□□ 0.48
HMGN1-203ENST00000380748 YWHAGP61981 247 aaKnown RBP eCLIP18.07■□□□□ 0.48
HMGN1-203ENST00000380748 TRIP4Q15650 581 aaPredicted RBP18.07■□□□□ 0.48
HMGN1-203ENST00000380748 E2F4Q16254 413 aa18.07■□□□□ 0.48
HMGN1-203ENST00000380748 PROX2Q3B8N5 592 aa18.07■□□□□ 0.48
HMGN1-203ENST00000380748 ZACNQ401N2 412 aa18.07■□□□□ 0.48
HMGN1-203ENST00000380748 PPP1R26Q5T8A7 1209 aaPredicted RBP18.07■□□□□ 0.48
HMGN1-203ENST00000380748 SPATS2Q86XZ4 545 aaKnown RBP18.07■□□□□ 0.48
HMGN1-203ENST00000380748 LURAP1LQ8IV03 231 aa18.07■□□□□ 0.48
HMGN1-203ENST00000380748 DHX40Q8IX18 779 aaKnown RBP18.07■□□□□ 0.48
HMGN1-203ENST00000380748 OR2T34Q8NGX1 318 aa18.07■□□□□ 0.48
HMGN1-203ENST00000380748 MYO19Q96H55 970 aa18.07■□□□□ 0.48
HMGN1-203ENST00000380748 SERAC1Q96JX3 654 aa18.07■□□□□ 0.48
HMGN1-203ENST00000380748 ZNF578Q96N58 590 aaPredicted RBP18.07■□□□□ 0.48
HMGN1-203ENST00000380748 NT5C1AQ9BXI3 368 aa18.07■□□□□ 0.48
HMGN1-203ENST00000380748 TFIP11Q9UBB9 837 aaKnown RBP18.07■□□□□ 0.48
HMGN1-203ENST00000380748 SCML1Q9UN30 329 aa18.07■□□□□ 0.48
HMGN1-203ENST00000380748 BOD1L1Q8NFC6 3051 aa18.07■□□□□ 0.48
HMGN1-203ENST00000380748 UBR5O95071 2799 aaPredicted RBP18.06■□□□□ 0.48
HMGN1-203ENST00000380748 SIN3BO75182 1162 aa18.06■□□□□ 0.48
HMGN1-203ENST00000380748 RPN1P04843 607 aaKnown RBP18.06■□□□□ 0.48
HMGN1-203ENST00000380748 TRIM21P19474 475 aaKnown RBP18.06■□□□□ 0.48
HMGN1-203ENST00000380748 CD70P32970 193 aa18.06■□□□□ 0.48
HMGN1-203ENST00000380748 CST6Q15828 149 aa18.06■□□□□ 0.48
HMGN1-203ENST00000380748 TAF4BQ92750 862 aa18.06■□□□□ 0.48
HMGN1-203ENST00000380748 TMA16Q96EY4 203 aaKnown RBP18.06■□□□□ 0.48
HMGN1-203ENST00000380748 LRRC27Q9C0I9 530 aa18.06■□□□□ 0.48
HMGN1-203ENST00000380748 ERVMER34-1Q9H9K5 563 aa18.06■□□□□ 0.48
HMGN1-203ENST00000380748 CGNQ9P2M7 1197 aaKnown RBP18.06■□□□□ 0.48
HMGN1-203ENST00000380748 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.05■□□□□ 0.48
HMGN1-203ENST00000380748 SDC3O75056 442 aa18.05■□□□□ 0.48
HMGN1-203ENST00000380748 HLA-DRAP01903 254 aa18.05■□□□□ 0.48
HMGN1-203ENST00000380748 CD58P19256 250 aa18.05■□□□□ 0.48
HMGN1-203ENST00000380748 POLR2EP19388 210 aaKnown RBP18.05■□□□□ 0.48
HMGN1-203ENST00000380748 CASP1P29466 404 aa18.05■□□□□ 0.48
HMGN1-203ENST00000380748 PIK3CAP42336 1068 aa18.05■□□□□ 0.48
HMGN1-203ENST00000380748 HARS2P49590 506 aaKnown RBP18.05■□□□□ 0.48
HMGN1-203ENST00000380748 CCR5P51681 352 aa18.05■□□□□ 0.48
HMGN1-203ENST00000380748 GABREP78334 506 aa18.05■□□□□ 0.48
HMGN1-203ENST00000380748 SV2AQ7L0J3 742 aa18.05■□□□□ 0.48
HMGN1-203ENST00000380748 MMAAQ8IVH4 418 aaKnown RBP18.05■□□□□ 0.48
HMGN1-203ENST00000380748 ARHGAP18Q8N392 663 aa18.05■□□□□ 0.48
HMGN1-203ENST00000380748 KCNE4Q8WWG9 221 aa18.05■□□□□ 0.48
HMGN1-203ENST00000380748 NDRG1Q92597 394 aaKnown RBP18.05■□□□□ 0.48
HMGN1-203ENST00000380748 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.05■□□□□ 0.48
HMGN1-203ENST00000380748 APOBEC3GQ9HC16 384 aaKnown RBP18.05■□□□□ 0.48
HMGN1-203ENST00000380748 SLC39A2Q9NP94 309 aa18.05■□□□□ 0.48
HMGN1-203ENST00000380748 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.05■□□□□ 0.48
HMGN1-203ENST00000380748 TRIM38O00635 465 aa18.04■□□□□ 0.48
HMGN1-203ENST00000380748 KLK10O43240 276 aa18.04■□□□□ 0.48
HMGN1-203ENST00000380748 SIGLEC6O43699 453 aa18.04■□□□□ 0.48
HMGN1-203ENST00000380748 RNASEH1O60930 286 aaKnown RBP18.04■□□□□ 0.48
HMGN1-203ENST00000380748 PPP2CBP62714 309 aa18.04■□□□□ 0.48
HMGN1-203ENST00000380748 PPP2CAP67775 309 aa18.04■□□□□ 0.48
HMGN1-203ENST00000380748 E2F1Q01094 437 aa18.04■□□□□ 0.48
HMGN1-203ENST00000380748 VAC14Q08AM6 782 aa18.04■□□□□ 0.48
HMGN1-203ENST00000380748 KNOP1Q1ED39 458 aaKnown RBP18.04■□□□□ 0.48
HMGN1-203ENST00000380748 HNRNPA1L2Q32P51 320 aaKnown RBP18.04■□□□□ 0.48
HMGN1-203ENST00000380748 SLC45A4Q5BKX6 768 aa18.04■□□□□ 0.48
HMGN1-203ENST00000380748 CNNM4Q6P4Q7 775 aa18.04■□□□□ 0.48
HMGN1-203ENST00000380748 BHLHA9Q7RTU4 235 aa18.04■□□□□ 0.48
HMGN1-203ENST00000380748 OXR1Q8N573 874 aa18.04■□□□□ 0.48
HMGN1-203ENST00000380748 AADATQ8N5Z0 425 aa18.04■□□□□ 0.48
HMGN1-203ENST00000380748 DHX58Q96C10 678 aa18.04■□□□□ 0.48
HMGN1-203ENST00000380748 MED8Q96G25 268 aa18.04■□□□□ 0.48
HMGN1-203ENST00000380748 USP28Q96RU2 1077 aa18.04■□□□□ 0.48
HMGN1-203ENST00000380748 OMDQ99983 421 aa18.04■□□□□ 0.48
HMGN1-203ENST00000380748 SFMBT1Q9UHJ3 866 aa18.04■□□□□ 0.48
HMGN1-203ENST00000380748 STOML2Q9UJZ1 356 aa18.04■□□□□ 0.48
HMGN1-203ENST00000380748 FZD4Q9ULV1 537 aa18.04■□□□□ 0.48
HMGN1-203ENST00000380748 ADPRHP54922 357 aa18.03■□□□□ 0.48
HMGN1-203ENST00000380748 ZNF445P59923 1031 aa18.03■□□□□ 0.48
HMGN1-203ENST00000380748 SLC39A14Q15043 492 aa18.03■□□□□ 0.48
HMGN1-203ENST00000380748 ZNF394Q53GI3 561 aa18.03■□□□□ 0.48
HMGN1-203ENST00000380748 RAB41Q5JT25 222 aa18.03■□□□□ 0.48
HMGN1-203ENST00000380748 ADGRF1Q5T601 910 aa18.03■□□□□ 0.48
HMGN1-203ENST00000380748 C9orf64Q5T6V5 341 aa18.03■□□□□ 0.48
HMGN1-203ENST00000380748 RFWD3Q6PCD5 774 aa18.03■□□□□ 0.48
HMGN1-203ENST00000380748 UNC13DQ70J99 1090 aa18.03■□□□□ 0.48
HMGN1-203ENST00000380748 PIGZQ86VD9 579 aa18.03■□□□□ 0.48
HMGN1-203ENST00000380748 SNRNP27Q8WVK2 155 aaKnown RBP18.03■□□□□ 0.48
HMGN1-203ENST00000380748 MSI1O43347 362 aaKnown RBP18.02■□□□□ 0.48
HMGN1-203ENST00000380748 TBL1XO60907 577 aa18.02■□□□□ 0.48
HMGN1-203ENST00000380748 DXOO77932 396 aaKnown RBP18.02■□□□□ 0.48
HMGN1-203ENST00000380748 SLC8A1P32418 973 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms