RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 SLC30A5Q8TAD4 765 aa9.6□□□□□ -0.87
HMGN1-202ENST00000380747 DDI1Q8WTU0 396 aa9.6□□□□□ -0.87
HMGN1-202ENST00000380747 CPLX3Q8WVH0 158 aa9.6□□□□□ -0.87
HMGN1-202ENST00000380747 GLMNQ92990 594 aa9.6□□□□□ -0.87
HMGN1-202ENST00000380747 RNF34Q969K3 372 aa9.6□□□□□ -0.87
HMGN1-202ENST00000380747 CALR3Q96L12 384 aaKnown RBP9.6□□□□□ -0.87
HMGN1-202ENST00000380747 FCRL2Q96LA5 508 aaPredicted RBP9.6□□□□□ -0.87
HMGN1-202ENST00000380747 SLC2A13Q96QE2 648 aa9.6□□□□□ -0.87
HMGN1-202ENST00000380747 XPO6Q96QU8 1125 aaKnown RBP9.6□□□□□ -0.87
HMGN1-202ENST00000380747 C11orf70Q9BRQ4 267 aa9.6□□□□□ -0.87
HMGN1-202ENST00000380747 EDEM3Q9BZQ6 932 aa9.6□□□□□ -0.87
HMGN1-202ENST00000380747 DDIT4Q9NX09 232 aa9.6□□□□□ -0.87
HMGN1-202ENST00000380747 MARK1Q9P0L2 795 aa9.6□□□□□ -0.87
HMGN1-202ENST00000380747 DEC1Q9P2X7 70 aa9.6□□□□□ -0.87
HMGN1-202ENST00000380747 MYO6Q9UM54 1294 aa9.6□□□□□ -0.87
HMGN1-202ENST00000380747 TLR6Q9Y2C9 796 aa9.6□□□□□ -0.87
HMGN1-202ENST00000380747 SPEGQ15772 3267 aa9.59□□□□□ -0.87
HMGN1-202ENST00000380747 LAMA1P25391 3075 aa9.59□□□□□ -0.87
HMGN1-202ENST00000380747 GOLGA6L7A0A1B0GV03 622 aa9.59□□□□□ -0.87
HMGN1-202ENST00000380747 TBC1D3BA6NDS4 549 aa9.59□□□□□ -0.87
HMGN1-202ENST00000380747 SLC30A4O14863 429 aa9.59□□□□□ -0.87
HMGN1-202ENST00000380747 TRIM24O15164 1050 aa9.59□□□□□ -0.87
HMGN1-202ENST00000380747 CBFA2T2O43439 604 aa9.59□□□□□ -0.87
HMGN1-202ENST00000380747 ACSL4O60488 711 aa9.59□□□□□ -0.87
HMGN1-202ENST00000380747 KAT7O95251 611 aa9.59□□□□□ -0.87
HMGN1-202ENST00000380747 LATS1O95835 1130 aa9.59□□□□□ -0.87
HMGN1-202ENST00000380747 IGLV3-27P01718 113 aa9.59□□□□□ -0.87
HMGN1-202ENST00000380747 APOEP02649 317 aa9.59□□□□□ -0.87
HMGN1-202ENST00000380747 TDGF1P13385 188 aa9.59□□□□□ -0.87
HMGN1-202ENST00000380747 MMP8P22894 467 aa9.59□□□□□ -0.87
HMGN1-202ENST00000380747 GBP1P32455 592 aa9.59□□□□□ -0.87
HMGN1-202ENST00000380747 PBX1P40424 430 aa9.59□□□□□ -0.87
HMGN1-202ENST00000380747 EIF2DP41214 584 aaKnown RBP9.59□□□□□ -0.87
HMGN1-202ENST00000380747 MATKP42679 507 aa9.59□□□□□ -0.87
HMGN1-202ENST00000380747 CXCL12P48061 93 aa9.59□□□□□ -0.87
HMGN1-202ENST00000380747 SULT1E1P49888 294 aa9.59□□□□□ -0.87
HMGN1-202ENST00000380747 SATB1Q01826 763 aa9.59□□□□□ -0.87
HMGN1-202ENST00000380747 MESP2Q0VG99 397 aa9.59□□□□□ -0.87
HMGN1-202ENST00000380747 NME3Q13232 169 aa9.59□□□□□ -0.87
HMGN1-202ENST00000380747 CLEC16AQ2KHT3 1053 aa9.59□□□□□ -0.87
HMGN1-202ENST00000380747 PREPLQ4J6C6 727 aaPredicted RBP9.59□□□□□ -0.87
HMGN1-202ENST00000380747 ZC3H12AQ5D1E8 599 aaKnown RBP9.59□□□□□ -0.87
HMGN1-202ENST00000380747 FIGNQ5HY92 759 aa9.59□□□□□ -0.87
HMGN1-202ENST00000380747 TSSK4Q6SA08 328 aa9.59□□□□□ -0.87
HMGN1-202ENST00000380747 IRF2BP2Q7Z5L9 587 aa9.59□□□□□ -0.87
HMGN1-202ENST00000380747 ETFBKMTQ8IXQ9 262 aa9.59□□□□□ -0.87
HMGN1-202ENST00000380747 CPXM2Q8N436 756 aa9.59□□□□□ -0.87
HMGN1-202ENST00000380747 ZNF397Q8NF99 534 aaPredicted RBP9.59□□□□□ -0.87
HMGN1-202ENST00000380747 RPLP0P6Q8NHW5 317 aa9.59□□□□□ -0.87
HMGN1-202ENST00000380747 NETO1Q8TDF5 533 aa9.59□□□□□ -0.87
HMGN1-202ENST00000380747 EZH1Q92800 747 aaPredicted RBP9.59□□□□□ -0.87
HMGN1-202ENST00000380747 TTYH3Q9C0H2 523 aa9.59□□□□□ -0.87
HMGN1-202ENST00000380747 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.59□□□□□ -0.87
HMGN1-202ENST00000380747 GMEB2Q9UKD1 530 aa9.59□□□□□ -0.87
HMGN1-202ENST00000380747 ZFYVE26Q68DK2 2539 aa9.59□□□□□ -0.87
HMGN1-202ENST00000380747 A0A1W2PQJ5 194 aa9.58□□□□□ -0.88
HMGN1-202ENST00000380747 DCDC2BA2VCK2 349 aa9.58□□□□□ -0.88
HMGN1-202ENST00000380747 ANTXRLA6NF34 631 aa9.58□□□□□ -0.88
HMGN1-202ENST00000380747 K7EQS6 105 aa9.58□□□□□ -0.88
HMGN1-202ENST00000380747 M0QYT0 321 aa9.58□□□□□ -0.88
HMGN1-202ENST00000380747 IRAK2O43187 625 aa9.58□□□□□ -0.88
HMGN1-202ENST00000380747 CACNG3O60359 315 aa9.58□□□□□ -0.88
HMGN1-202ENST00000380747 FOXD2O60548 495 aaPredicted RBP9.58□□□□□ -0.88
HMGN1-202ENST00000380747 ATG13O75143 517 aa9.58□□□□□ -0.88
HMGN1-202ENST00000380747 PENKP01210 267 aaPredicted RBP9.58□□□□□ -0.88
HMGN1-202ENST00000380747 IGLV3-25P01717 112 aa9.58□□□□□ -0.88
HMGN1-202ENST00000380747 SKILP12757 684 aa9.58□□□□□ -0.88
HMGN1-202ENST00000380747 UNGP13051 313 aaPredicted RBP9.58□□□□□ -0.88
HMGN1-202ENST00000380747 ABCB4P21439 1286 aa9.58□□□□□ -0.88
HMGN1-202ENST00000380747 NOS2P35228 1153 aa9.58□□□□□ -0.88
HMGN1-202ENST00000380747 SCNN1AP37088 669 aa9.58□□□□□ -0.88
HMGN1-202ENST00000380747 GRIA2P42262 883 aa9.58□□□□□ -0.88
HMGN1-202ENST00000380747 DGKGP49619 791 aa9.58□□□□□ -0.88
HMGN1-202ENST00000380747 NRLP54845 237 aa9.58□□□□□ -0.88
HMGN1-202ENST00000380747 CENPCQ03188 943 aa9.58□□□□□ -0.88
HMGN1-202ENST00000380747 KLHL30Q0D2K2 578 aa9.58□□□□□ -0.88
HMGN1-202ENST00000380747 NNTQ13423 1086 aa9.58□□□□□ -0.88
HMGN1-202ENST00000380747 MPPE1Q53F39 396 aa9.58□□□□□ -0.88
HMGN1-202ENST00000380747 C2orf27AQ580R0 203 aa9.58□□□□□ -0.88
HMGN1-202ENST00000380747 C10orf76Q5T2E6 689 aa9.58□□□□□ -0.88
HMGN1-202ENST00000380747 ADGRF1Q5T601 910 aa9.58□□□□□ -0.88
HMGN1-202ENST00000380747 FYB2Q5VWT5 728 aa9.58□□□□□ -0.88
HMGN1-202ENST00000380747 E4F1Q66K89 784 aaPredicted RBP9.58□□□□□ -0.88
HMGN1-202ENST00000380747 LAIR1Q6GTX8 287 aa9.58□□□□□ -0.88
HMGN1-202ENST00000380747 NADSYN1Q6IA69 706 aa9.58□□□□□ -0.88
HMGN1-202ENST00000380747 PKN3Q6P5Z2 889 aa9.58□□□□□ -0.88
HMGN1-202ENST00000380747 RFWD3Q6PCD5 774 aa9.58□□□□□ -0.88
HMGN1-202ENST00000380747 SFTPA1Q8IWL2 248 aa9.58□□□□□ -0.88
HMGN1-202ENST00000380747 FAM217AQ8IXS0 508 aa9.58□□□□□ -0.88
HMGN1-202ENST00000380747 CCDC33Q8N5R6 958 aa9.58□□□□□ -0.88
HMGN1-202ENST00000380747 ATP6V0D2Q8N8Y2 350 aa9.58□□□□□ -0.88
HMGN1-202ENST00000380747 CCDC26Q8TAB7 109 aa9.58□□□□□ -0.88
HMGN1-202ENST00000380747 TMA16Q96EY4 203 aaKnown RBP9.58□□□□□ -0.88
HMGN1-202ENST00000380747 SLC39A13Q96H72 371 aa9.58□□□□□ -0.88
HMGN1-202ENST00000380747 DDX50Q9BQ39 737 aaKnown RBP9.58□□□□□ -0.88
HMGN1-202ENST00000380747 HAUS4Q9H6D7 363 aa9.58□□□□□ -0.88
HMGN1-202ENST00000380747 PARD6AQ9NPB6 346 aa9.58□□□□□ -0.88
HMGN1-202ENST00000380747 METTL5Q9NRN9 209 aaKnown RBP9.58□□□□□ -0.88
HMGN1-202ENST00000380747 POLR3BQ9NW08 1133 aaPredicted RBP9.58□□□□□ -0.88
HMGN1-202ENST00000380747 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms