RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 FAM208BQ5VWN6 2430 aa17.53■□□□□ 0.4
SMN2-201ENST00000380741 BICDL2A1A5D9 508 aa17.52■□□□□ 0.4
SMN2-201ENST00000380741 TMEM8BA6NDV4 472 aa17.52■□□□□ 0.4
SMN2-201ENST00000380741 IRAK2O43187 625 aa17.52■□□□□ 0.4
SMN2-201ENST00000380741 FYNP06241 537 aa17.52■□□□□ 0.4
SMN2-201ENST00000380741 DLDP09622 509 aaKnown RBP17.52■□□□□ 0.4
SMN2-201ENST00000380741 ACSL1P33121 698 aa17.52■□□□□ 0.4
SMN2-201ENST00000380741 RDXP35241 583 aaKnown RBP17.52■□□□□ 0.4
SMN2-201ENST00000380741 BNC1Q01954 994 aa17.52■□□□□ 0.4
SMN2-201ENST00000380741 MORC3Q14149 939 aa17.52■□□□□ 0.4
SMN2-201ENST00000380741 TRIP6Q15654 476 aaKnown RBP17.52■□□□□ 0.4
SMN2-201ENST00000380741 ZNF423Q2M1K9 1284 aa17.52■□□□□ 0.4
SMN2-201ENST00000380741 NADSYN1Q6IA69 706 aa17.52■□□□□ 0.4
SMN2-201ENST00000380741 FOXR2Q6PJQ5 311 aa17.52■□□□□ 0.4
SMN2-201ENST00000380741 TRIM59Q8IWR1 403 aa17.52■□□□□ 0.4
SMN2-201ENST00000380741 CHCHD4Q8N4Q1 142 aa17.52■□□□□ 0.4
SMN2-201ENST00000380741 EHBP1Q8NDI1 1231 aa17.52■□□□□ 0.4
SMN2-201ENST00000380741 DQX1Q8TE96 717 aaKnown RBP17.52■□□□□ 0.4
SMN2-201ENST00000380741 SNX19Q92543 992 aa17.52■□□□□ 0.4
SMN2-201ENST00000380741 AZIN2Q96A70 460 aa17.52■□□□□ 0.4
SMN2-201ENST00000380741 PRICKLE1Q96MT3 831 aaPredicted RBP17.52■□□□□ 0.4
SMN2-201ENST00000380741 KREMEN1Q96MU8 473 aa17.52■□□□□ 0.4
SMN2-201ENST00000380741 IRX2Q9BZI1 471 aaPredicted RBP17.52■□□□□ 0.4
SMN2-201ENST00000380741 PCED1AQ9H1Q7 454 aa17.52■□□□□ 0.4
SMN2-201ENST00000380741 C6orf106Q9H6K1 298 aaPredicted RBP17.52■□□□□ 0.4
SMN2-201ENST00000380741 IL21RQ9HBE5 538 aa17.52■□□□□ 0.4
SMN2-201ENST00000380741 PRSS16Q9NQE7 514 aa17.52■□□□□ 0.4
SMN2-201ENST00000380741 RALYQ9UKM9 306 aaKnown RBP17.52■□□□□ 0.4
SMN2-201ENST00000380741 SLCO1B1Q9Y6L6 691 aa17.52■□□□□ 0.4
SMN2-201ENST00000380741 LAMA5O15230 3695 aa17.52■□□□□ 0.39
SMN2-201ENST00000380741 TMEM131Q92545 1883 aa17.52■□□□□ 0.39
SMN2-201ENST00000380741 BIN1O00499 593 aa17.51■□□□□ 0.39
SMN2-201ENST00000380741 ATP5BP06576 529 aaKnown RBP17.51■□□□□ 0.39
SMN2-201ENST00000380741 POLR2EP19388 210 aaKnown RBP17.51■□□□□ 0.39
SMN2-201ENST00000380741 STX17P56962 302 aa17.51■□□□□ 0.39
SMN2-201ENST00000380741 RPS14P62263 151 aaKnown RBP17.51■□□□□ 0.39
SMN2-201ENST00000380741 KCNH2Q12809 1159 aa17.51■□□□□ 0.39
SMN2-201ENST00000380741 PKD1L2Q7Z442 2459 aa17.51■□□□□ 0.39
SMN2-201ENST00000380741 RAB44Q7Z6P3 723 aaPredicted RBP17.51■□□□□ 0.39
SMN2-201ENST00000380741 MFN1Q8IWA4 741 aa17.51■□□□□ 0.39
SMN2-201ENST00000380741 SCUBE3Q8IX30 993 aa17.51■□□□□ 0.39
SMN2-201ENST00000380741 HJURPQ8NCD3 748 aaPredicted RBP17.51■□□□□ 0.39
SMN2-201ENST00000380741 MYEOVQ96EZ4 313 aa17.51■□□□□ 0.39
SMN2-201ENST00000380741 LMLNQ96KR4 655 aa17.51■□□□□ 0.39
SMN2-201ENST00000380741 FCRL2Q96LA5 508 aaPredicted RBP17.51■□□□□ 0.39
SMN2-201ENST00000380741 GAREM1Q9H706 876 aa17.51■□□□□ 0.39
SMN2-201ENST00000380741 FBRSQ9HAH7 460 aa17.51■□□□□ 0.39
SMN2-201ENST00000380741 ST7Q9NRC1 585 aa17.51■□□□□ 0.39
SMN2-201ENST00000380741 STIM2Q9P246 746 aa17.51■□□□□ 0.39
SMN2-201ENST00000380741 NAALADL1Q9UQQ1 740 aa17.51■□□□□ 0.39
SMN2-201ENST00000380741 PCDHB9Q9Y5E1 797 aa17.51■□□□□ 0.39
SMN2-201ENST00000380741 CABIN1Q9Y6J0 2220 aa17.5■□□□□ 0.39
SMN2-201ENST00000380741 CER1O95813 267 aa17.5■□□□□ 0.39
SMN2-201ENST00000380741 FTH1P19P0C7X4 201 aa17.5■□□□□ 0.39
SMN2-201ENST00000380741 KRT5P13647 590 aa17.5■□□□□ 0.39
SMN2-201ENST00000380741 GPD2P43304 727 aa17.5■□□□□ 0.39
SMN2-201ENST00000380741 RPL34P49207 117 aaKnown RBP17.5■□□□□ 0.39
SMN2-201ENST00000380741 RPS24P62847 133 aaKnown RBP17.5■□□□□ 0.39
SMN2-201ENST00000380741 ZBTB16Q05516 673 aa17.5■□□□□ 0.39
SMN2-201ENST00000380741 ZNF557Q8N988 423 aaPredicted RBP17.5■□□□□ 0.39
SMN2-201ENST00000380741 FIBINQ8TAL6 211 aa17.5■□□□□ 0.39
SMN2-201ENST00000380741 ADAM32Q8TC27 787 aa17.5■□□□□ 0.39
SMN2-201ENST00000380741 ZCCHC14Q8WYQ9 949 aaKnown RBP17.5■□□□□ 0.39
SMN2-201ENST00000380741 FAM149B1Q96BN6 582 aa17.5■□□□□ 0.39
SMN2-201ENST00000380741 MYO19Q96H55 970 aa17.5■□□□□ 0.39
SMN2-201ENST00000380741 SERPINB11Q96P15 392 aa17.5■□□□□ 0.39
SMN2-201ENST00000380741 INTS2Q9H0H0 1204 aaKnown RBP17.5■□□□□ 0.39
SMN2-201ENST00000380741 NUCKS1Q9H1E3 243 aaKnown RBP17.5■□□□□ 0.39
SMN2-201ENST00000380741 MTG2Q9H4K7 406 aa17.5■□□□□ 0.39
SMN2-201ENST00000380741 CNTN6Q9UQ52 1028 aa17.5■□□□□ 0.39
SMN2-201ENST00000380741 TLR6Q9Y2C9 796 aa17.5■□□□□ 0.39
SMN2-201ENST00000380741 FNDC3AQ9Y2H6 1198 aaKnown RBP17.5■□□□□ 0.39
SMN2-201ENST00000380741 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.5■□□□□ 0.39
SMN2-201ENST00000380741 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.5■□□□□ 0.39
SMN2-201ENST00000380741 NYNRINQ9P2P1 1898 aaKnown RBP17.5■□□□□ 0.39
SMN2-201ENST00000380741 A0A1B0GVT2 93 aa17.49■□□□□ 0.39
SMN2-201ENST00000380741 FAM221BA6H8Z2 402 aa17.49■□□□□ 0.39
SMN2-201ENST00000380741 CBFA2T3O75081 653 aa17.49■□□□□ 0.39
SMN2-201ENST00000380741 SEMA4FO95754 770 aa17.49■□□□□ 0.39
SMN2-201ENST00000380741 GNA14O95837 355 aa17.49■□□□□ 0.39
SMN2-201ENST00000380741 AFPP02771 609 aaKnown RBP17.49■□□□□ 0.39
SMN2-201ENST00000380741 DNTTP04053 509 aa17.49■□□□□ 0.39
SMN2-201ENST00000380741 ZNF883P0CG24 379 aa17.49■□□□□ 0.39
SMN2-201ENST00000380741 MATKP42679 507 aa17.49■□□□□ 0.39
SMN2-201ENST00000380741 CSNK1EP49674 416 aaKnown RBP17.49■□□□□ 0.39
SMN2-201ENST00000380741 AFF3P51826 1226 aaKnown RBP17.49■□□□□ 0.39
SMN2-201ENST00000380741 MARSP56192 900 aaKnown RBP17.49■□□□□ 0.39
SMN2-201ENST00000380741 PAK1Q13153 545 aa17.49■□□□□ 0.39
SMN2-201ENST00000380741 NNTQ13423 1086 aa17.49■□□□□ 0.39
SMN2-201ENST00000380741 HLA-BQ31612 363 aa17.49■□□□□ 0.39
SMN2-201ENST00000380741 TTC31Q49AM3 519 aaPredicted RBP17.49■□□□□ 0.39
SMN2-201ENST00000380741 DENND1BQ6P3S1 775 aa17.49■□□□□ 0.39
SMN2-201ENST00000380741 IL27RAQ6UWB1 636 aa17.49■□□□□ 0.39
SMN2-201ENST00000380741 TAC4Q86UU9 113 aa17.49■□□□□ 0.39
SMN2-201ENST00000380741 TTC17Q96AE7 1141 aa17.49■□□□□ 0.39
SMN2-201ENST00000380741 SLC39A13Q96H72 371 aa17.49■□□□□ 0.39
SMN2-201ENST00000380741 DDX50Q9BQ39 737 aaKnown RBP17.49■□□□□ 0.39
SMN2-201ENST00000380741 BTBD1Q9H0C5 482 aa17.49■□□□□ 0.39
SMN2-201ENST00000380741 TM7SF3Q9NS93 570 aa17.49■□□□□ 0.39
SMN2-201ENST00000380741 SUN2Q9UH99 717 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms