RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 GPD2P43304 727 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 RAB41Q5JT25 222 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 TPGS2Q68CL5 300 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 SCARA5Q6ZMJ2 495 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 GADD45GIP1Q8TAE8 222 aaPredicted RBP8□□□□□ -1.13
CDKL5-202ENST00000379996 C9orf72Q96LT7 481 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 RBM15Q96T37 977 aaKnown RBP eCLIP8□□□□□ -1.13
CDKL5-202ENST00000379996 SLC4A5Q9BY07 1137 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 TLE6Q9H808 572 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 DNAJC17Q9NVM6 304 aaKnown RBP8□□□□□ -1.13
CDKL5-202ENST00000379996 ASNSD1Q9NWL6 643 aa8□□□□□ -1.13
CDKL5-202ENST00000379996 MTCL1Q9Y4B5 1905 aaKnown RBP8□□□□□ -1.13
CDKL5-202ENST00000379996 TRAFD1O14545 582 aaPredicted RBP7.99□□□□□ -1.13
CDKL5-202ENST00000379996 XPO1O14980 1071 aaKnown RBP7.99□□□□□ -1.13
CDKL5-202ENST00000379996 THAP12O43422 761 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 ABLIM3O94929 683 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 DHRS4L1P0CG22 281 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 LMO2P25791 158 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 CDR1P51861 262 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 BCAT1P54687 386 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 SNX16P57768 344 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 GPR17Q13304 367 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 NFE2Q16621 373 aaPredicted RBP7.99□□□□□ -1.13
CDKL5-202ENST00000379996 PDK4Q16654 411 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 TFDP3Q5H9I0 405 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 C9orf50Q5SZB4 431 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 C4orf50Q6ZRC1 276 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 PAQR9Q6ZVX9 377 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 BEND5Q7L4P6 421 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 CCDC25Q86WR0 208 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 TMEM173Q86WV6 379 aaPredicted RBP7.99□□□□□ -1.13
CDKL5-202ENST00000379996 OR6B3Q8NGW1 331 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 OR10T2Q8NGX3 314 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 CCHCR1Q8TD31 782 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 SLC35F5Q8WV83 523 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 RBM41Q96IZ5 413 aaKnown RBP7.99□□□□□ -1.13
CDKL5-202ENST00000379996 HSFY1Q96LI6 401 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 TGS1Q96RS0 853 aaKnown RBP7.99□□□□□ -1.13
CDKL5-202ENST00000379996 DUSP16Q9BY84 665 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 KIF9Q9HAQ2 790 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 KLHL11Q9NVR0 708 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 IL37Q9NZH6 218 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 SAMD15Q9P1V8 674 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 TJP2Q9UDY2 1190 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 TSR3Q9UJK0 312 aaKnown RBP7.99□□□□□ -1.13
CDKL5-202ENST00000379996 CHKBQ9Y259 395 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 EDF1O60869 148 aaKnown RBP7.99□□□□□ -1.13
CDKL5-202ENST00000379996 LRCH4O75427 683 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 MICAL2O94851 1124 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 ADCY8P40145 1251 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 GLUD2P49448 558 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 TSPY1Q01534 308 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 BST2Q10589 180 aaKnown RBP7.99□□□□□ -1.13
CDKL5-202ENST00000379996 PTPN20Q4JDL3 420 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 ANKRD22Q5VYY1 191 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 TRNP1Q6NT89 227 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 VASH1Q7L8A9 365 aaPredicted RBP7.99□□□□□ -1.13
CDKL5-202ENST00000379996 TMEM110Q86TL2 294 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 TMEM35BQ8NCS4 154 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 DCAKDQ8WVC6 231 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 CPT1BQ92523 772 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 SPATA17Q96L03 361 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 C8orf48Q96LL4 319 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 NSRP1Q9H0G5 558 aaKnown RBP7.99□□□□□ -1.13
CDKL5-202ENST00000379996 ZNF358Q9NW07 568 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 WDR35Q9P2L0 1181 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 CACNG4Q9UBN1 327 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 STRIP2Q9ULQ0 834 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 FAM47DPA6NHR8 397 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 F8W810 466 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 FGF18O76093 207 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 UPP2O95045 317 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 UNC5CO95185 931 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 IL1BP01584 269 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 ACADSBP45954 432 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 RAB33AQ14088 237 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 SLC1A5Q15758 541 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 ACCSLQ4AC99 568 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 RTP2Q5QGT7 225 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 FNBP1LQ5T0N5 605 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 LIN9Q5TKA1 542 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 TDHQ8IZJ6 230 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 GBP7Q8N8V2 638 aaPredicted RBP7.99□□□□□ -1.13
CDKL5-202ENST00000379996 SPPL2BQ8TCT7 592 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 SLC7A6OSQ96CW6 309 aaPredicted RBP7.99□□□□□ -1.13
CDKL5-202ENST00000379996 SMARCD1Q96GM5 515 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 TTC25Q96NG3 672 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 MCEEQ96PE7 176 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 KCTD15Q96SI1 283 aaPredicted RBP7.99□□□□□ -1.13
CDKL5-202ENST00000379996 C11orf84Q9BUA3 381 aaPredicted RBP7.99□□□□□ -1.13
CDKL5-202ENST00000379996 MAK16Q9BXY0 300 aaKnown RBP7.99□□□□□ -1.13
CDKL5-202ENST00000379996 B3GNT5Q9BYG0 378 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 LRMDAQ9H2I8 198 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 DPEP3Q9H4B8 488 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 ECT2Q9H8V3 914 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 PPCSQ9HAB8 311 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 HCSTQ9UBK5 93 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 SLC24A2Q9UI40 661 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 DCTN4Q9UJW0 460 aa7.99□□□□□ -1.13
CDKL5-202ENST00000379996 CEP83Q9Y592 693 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms