RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 SGK1O00141 431 aa25.33■■□□□ 1.65
ECHDC3-201ENST00000379215 EPCAMP16422 314 aa25.33■■□□□ 1.65
ECHDC3-201ENST00000379215 ATP5OP48047 213 aa25.33■■□□□ 1.65
ECHDC3-201ENST00000379215 SMAD3P84022 425 aaKnown RBP25.33■■□□□ 1.65
ECHDC3-201ENST00000379215 PDK1Q15118 436 aa25.33■■□□□ 1.65
ECHDC3-201ENST00000379215 MS4A13Q5J8X5 152 aa25.33■■□□□ 1.65
ECHDC3-201ENST00000379215 RWDD4Q6NW29 188 aaKnown RBP25.33■■□□□ 1.65
ECHDC3-201ENST00000379215 DARS2Q6PI48 645 aaKnown RBP25.33■■□□□ 1.65
ECHDC3-201ENST00000379215 NPNTQ6UXI9 565 aa25.33■■□□□ 1.65
ECHDC3-201ENST00000379215 BBOF1Q8ND07 529 aa25.33■■□□□ 1.65
ECHDC3-201ENST00000379215 TIFAQ96CG3 184 aa25.33■■□□□ 1.65
ECHDC3-201ENST00000379215 BRD8Q9H0E9 1235 aa25.33■■□□□ 1.65
ECHDC3-201ENST00000379215 RETREG1Q9H6L5 497 aa25.33■■□□□ 1.65
ECHDC3-201ENST00000379215 TRPC7Q9HCX4 862 aa25.33■■□□□ 1.65
ECHDC3-201ENST00000379215 DTLQ9NZJ0 730 aa25.33■■□□□ 1.65
ECHDC3-201ENST00000379215 ASIC3Q9UHC3 531 aa25.33■■□□□ 1.65
ECHDC3-201ENST00000379215 ZMYM5Q9UJ78 669 aa25.33■■□□□ 1.65
ECHDC3-201ENST00000379215 HCFC2Q9Y5Z7 792 aa25.33■■□□□ 1.65
ECHDC3-201ENST00000379215 BCLAF3A2AJT9 711 aaKnown RBP25.32■■□□□ 1.64
ECHDC3-201ENST00000379215 C2orf78A6NCI8 922 aa25.32■■□□□ 1.64
ECHDC3-201ENST00000379215 SPDYE4A6NLX3 237 aa25.32■■□□□ 1.64
ECHDC3-201ENST00000379215 PPP1R12AO14974 1030 aaPredicted RBP25.32■■□□□ 1.64
ECHDC3-201ENST00000379215 LATS1O95835 1130 aa25.32■■□□□ 1.64
ECHDC3-201ENST00000379215 HMBSP08397 361 aa25.32■■□□□ 1.64
ECHDC3-201ENST00000379215 SRGAP2BP0DMP2 458 aa25.32■■□□□ 1.64
ECHDC3-201ENST00000379215 MBL2P11226 248 aaPredicted RBP25.32■■□□□ 1.64
ECHDC3-201ENST00000379215 MX2P20592 715 aa25.32■■□□□ 1.64
ECHDC3-201ENST00000379215 GBE1Q04446 702 aa25.32■■□□□ 1.64
ECHDC3-201ENST00000379215 DUSP6Q16828 381 aa25.32■■□□□ 1.64
ECHDC3-201ENST00000379215 PIK3R6Q5UE93 754 aa25.32■■□□□ 1.64
ECHDC3-201ENST00000379215 FBXO38Q6PIJ6 1188 aa25.32■■□□□ 1.64
ECHDC3-201ENST00000379215 GAREM2Q75VX8 874 aa25.32■■□□□ 1.64
ECHDC3-201ENST00000379215 CASKIN2Q8WXE0 1202 aa25.32■■□□□ 1.64
ECHDC3-201ENST00000379215 OLFM3Q96PB7 478 aa25.32■■□□□ 1.64
ECHDC3-201ENST00000379215 DDX50Q9BQ39 737 aaKnown RBP25.32■■□□□ 1.64
ECHDC3-201ENST00000379215 KLF16Q9BXK1 252 aaPredicted RBP25.32■■□□□ 1.64
ECHDC3-201ENST00000379215 ATXN3LQ9H3M9 355 aa25.32■■□□□ 1.64
ECHDC3-201ENST00000379215 PCDH9Q9HC56 1237 aa25.32■■□□□ 1.64
ECHDC3-201ENST00000379215 NEU2Q9Y3R4 380 aa25.32■■□□□ 1.64
ECHDC3-201ENST00000379215 KRT14P02533 472 aa25.31■■□□□ 1.64
ECHDC3-201ENST00000379215 ZC3H18Q86VM9 953 aaKnown RBP25.31■■□□□ 1.64
ECHDC3-201ENST00000379215 GDPD5Q8WTR4 605 aa25.31■■□□□ 1.64
ECHDC3-201ENST00000379215 IFT81Q8WYA0 676 aa25.31■■□□□ 1.64
ECHDC3-201ENST00000379215 TMEM121Q9BTD3 319 aa25.31■■□□□ 1.64
ECHDC3-201ENST00000379215 ARFGAP3Q9NP61 516 aa25.31■■□□□ 1.64
ECHDC3-201ENST00000379215 ETNK2Q9NVF9 386 aa25.31■■□□□ 1.64
ECHDC3-201ENST00000379215 SNX10Q9Y5X0 201 aa25.31■■□□□ 1.64
ECHDC3-201ENST00000379215 MTCL1Q9Y4B5 1905 aaKnown RBP25.31■■□□□ 1.64
ECHDC3-201ENST00000379215 TRAV19A0A0A6YYK7 116 aa25.3■■□□□ 1.64
ECHDC3-201ENST00000379215 ZSCAN5CA6NGD5 496 aaPredicted RBP25.3■■□□□ 1.64
ECHDC3-201ENST00000379215 MFSD11O43934 449 aa25.3■■□□□ 1.64
ECHDC3-201ENST00000379215 MYL4P12829 197 aa25.3■■□□□ 1.64
ECHDC3-201ENST00000379215 HDCP19113 662 aa25.3■■□□□ 1.64
ECHDC3-201ENST00000379215 AUHQ13825 339 aaKnown RBP25.3■■□□□ 1.64
ECHDC3-201ENST00000379215 ARHGAP15Q53QZ3 475 aa25.3■■□□□ 1.64
ECHDC3-201ENST00000379215 SLC45A4Q5BKX6 768 aa25.3■■□□□ 1.64
ECHDC3-201ENST00000379215 HS6ST3Q8IZP7 471 aa25.3■■□□□ 1.64
ECHDC3-201ENST00000379215 QKIQ96PU8 341 aaKnown RBP eCLIP25.3■■□□□ 1.64
ECHDC3-201ENST00000379215 PRKD2Q9BZL6 878 aa25.3■■□□□ 1.64
ECHDC3-201ENST00000379215 RNF38Q9H0F5 515 aa25.3■■□□□ 1.64
ECHDC3-201ENST00000379215 XPO7Q9UIA9 1087 aaKnown RBP25.3■■□□□ 1.64
ECHDC3-201ENST00000379215 NEU3Q9UQ49 428 aa25.3■■□□□ 1.64
ECHDC3-201ENST00000379215 IGLV3-10A0A075B6K4 115 aa25.3■■□□□ 1.64
ECHDC3-201ENST00000379215 ESYT3A0FGR9 886 aa25.3■■□□□ 1.64
ECHDC3-201ENST00000379215 WASH4PA8MWX3 477 aa25.3■■□□□ 1.64
ECHDC3-201ENST00000379215 ACSL4O60488 711 aa25.3■■□□□ 1.64
ECHDC3-201ENST00000379215 ACTN2P35609 894 aa25.3■■□□□ 1.64
ECHDC3-201ENST00000379215 SLC7A9P82251 487 aa25.3■■□□□ 1.64
ECHDC3-201ENST00000379215 CALCOCO2Q13137 446 aa25.3■■□□□ 1.64
ECHDC3-201ENST00000379215 HLTFQ14527 1009 aaKnown RBP eCLIP25.3■■□□□ 1.64
ECHDC3-201ENST00000379215 CHSY1Q86X52 802 aa25.3■■□□□ 1.64
ECHDC3-201ENST00000379215 TFB1MQ8WVM0 346 aaKnown RBP25.3■■□□□ 1.64
ECHDC3-201ENST00000379215 MRPL38Q96DV4 380 aaKnown RBP25.3■■□□□ 1.64
ECHDC3-201ENST00000379215 SNF8Q96H20 258 aa25.3■■□□□ 1.64
ECHDC3-201ENST00000379215 ZYG11BQ9C0D3 744 aa25.3■■□□□ 1.64
ECHDC3-201ENST00000379215 DPH5Q9H2P9 285 aa25.3■■□□□ 1.64
ECHDC3-201ENST00000379215 DZANK1Q9NVP4 752 aa25.3■■□□□ 1.64
ECHDC3-201ENST00000379215 WHRNQ9P202 907 aa25.3■■□□□ 1.64
ECHDC3-201ENST00000379215 F5H5T6 163 aa25.29■■□□□ 1.64
ECHDC3-201ENST00000379215 PER2O15055 1255 aa25.29■■□□□ 1.64
ECHDC3-201ENST00000379215 RFPL2O75678 378 aa25.29■■□□□ 1.64
ECHDC3-201ENST00000379215 STC2O76061 302 aa25.29■■□□□ 1.64
ECHDC3-201ENST00000379215 RHOQP17081 205 aa25.29■■□□□ 1.64
ECHDC3-201ENST00000379215 KCNQ1P51787 676 aa25.29■■□□□ 1.64
ECHDC3-201ENST00000379215 TXNDC8Q6A555 127 aa25.29■■□□□ 1.64
ECHDC3-201ENST00000379215 EMBQ6PCB8 327 aa25.29■■□□□ 1.64
ECHDC3-201ENST00000379215 C4orf22Q6V702 233 aa25.29■■□□□ 1.64
ECHDC3-201ENST00000379215 LRRC45Q96CN5 670 aa25.29■■□□□ 1.64
ECHDC3-201ENST00000379215 RTP4Q96DX8 246 aa25.29■■□□□ 1.64
ECHDC3-201ENST00000379215 PRMT1Q99873 361 aaKnown RBP25.29■■□□□ 1.64
ECHDC3-201ENST00000379215 TRIM31Q9BZY9 425 aa25.29■■□□□ 1.64
ECHDC3-201ENST00000379215 A0A1W2PRU2 124 aa25.28■■□□□ 1.64
ECHDC3-201ENST00000379215 ZNF197O14709 1029 aa25.28■■□□□ 1.64
ECHDC3-201ENST00000379215 PAPLNO95428 1278 aa25.28■■□□□ 1.64
ECHDC3-201ENST00000379215 IFNB1P01574 187 aa25.28■■□□□ 1.64
ECHDC3-201ENST00000379215 ITIH2P19823 946 aa25.28■■□□□ 1.64
ECHDC3-201ENST00000379215 GGCXP38435 758 aa25.28■■□□□ 1.64
ECHDC3-201ENST00000379215 ADCY8P40145 1251 aa25.28■■□□□ 1.64
ECHDC3-201ENST00000379215 CARSP49589 748 aaKnown RBP25.28■■□□□ 1.64
ECHDC3-201ENST00000379215 CLCN6P51797 869 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms