RNA–Protein interactions for RNA: ENST00000379013.6

UPK1A-202, Transcript of uroplakin 1A, humanhuman

TSL 1 (best) BASIC

Gene UPK1A, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-202ENST00000379013 OTOL1A6NHN0 477 aaPredicted RBP14.36□□□□□ -0.11
UPK1A-202ENST00000379013 GFRA3O60609 400 aa14.36□□□□□ -0.11
UPK1A-202ENST00000379013 IGLV3-27P01718 113 aa14.36□□□□□ -0.11
UPK1A-202ENST00000379013 COMTP21964 271 aa14.36□□□□□ -0.11
UPK1A-202ENST00000379013 HDAC4P56524 1084 aa14.36□□□□□ -0.11
UPK1A-202ENST00000379013 OGDHQ02218 1023 aa14.36□□□□□ -0.11
UPK1A-202ENST00000379013 ZNF252P-AS1Q0IIN9 211 aa14.36□□□□□ -0.11
UPK1A-202ENST00000379013 SCAPQ12770 1279 aa14.36□□□□□ -0.11
UPK1A-202ENST00000379013 GAS6Q14393 721 aa14.36□□□□□ -0.11
UPK1A-202ENST00000379013 ERMARDQ5T6L9 678 aa14.36□□□□□ -0.11
UPK1A-202ENST00000379013 TRNP1Q6NT89 227 aa14.36□□□□□ -0.11
UPK1A-202ENST00000379013 LRRC57Q8N9N7 239 aa14.36□□□□□ -0.11
UPK1A-202ENST00000379013 ADAM32Q8TC27 787 aa14.36□□□□□ -0.11
UPK1A-202ENST00000379013 USP13Q92995 863 aaPredicted RBP14.36□□□□□ -0.11
UPK1A-202ENST00000379013 BTBD6Q96KE9 485 aa14.36□□□□□ -0.11
UPK1A-202ENST00000379013 HAPLN3Q96S86 360 aa14.36□□□□□ -0.11
UPK1A-202ENST00000379013 CYP2S1Q96SQ9 504 aa14.36□□□□□ -0.11
UPK1A-202ENST00000379013 KLF16Q9BXK1 252 aaPredicted RBP14.36□□□□□ -0.11
UPK1A-202ENST00000379013 TRIM7Q9C029 511 aa14.36□□□□□ -0.11
UPK1A-202ENST00000379013 TRPV5Q9NQA5 729 aa14.36□□□□□ -0.11
UPK1A-202ENST00000379013 PIGVQ9NUD9 493 aa14.36□□□□□ -0.11
UPK1A-202ENST00000379013 C2orf42Q9NWW7 574 aa14.36□□□□□ -0.11
UPK1A-202ENST00000379013 THG1LQ9NWX6 298 aaKnown RBP14.36□□□□□ -0.11
UPK1A-202ENST00000379013 SALL4Q9UJQ4 1053 aa14.36□□□□□ -0.11
UPK1A-202ENST00000379013 NUDT5Q9UKK9 219 aa14.36□□□□□ -0.11
UPK1A-202ENST00000379013 CAPN6Q9Y6Q1 641 aa14.36□□□□□ -0.11
UPK1A-202ENST00000379013 PRR23AA6NEV1 266 aa14.35□□□□□ -0.11
UPK1A-202ENST00000379013 MSI1O43347 362 aaKnown RBP14.35□□□□□ -0.11
UPK1A-202ENST00000379013 TBX18O95935 607 aa14.35□□□□□ -0.11
UPK1A-202ENST00000379013 MIPP30301 263 aa14.35□□□□□ -0.11
UPK1A-202ENST00000379013 CHKAP35790 457 aa14.35□□□□□ -0.11
UPK1A-202ENST00000379013 PGFP49763 221 aa14.35□□□□□ -0.11
UPK1A-202ENST00000379013 GNG11P61952 73 aa14.35□□□□□ -0.11
UPK1A-202ENST00000379013 EIF4EBP2Q13542 120 aaPredicted RBP14.35□□□□□ -0.11
UPK1A-202ENST00000379013 ZNF569Q5MCW4 686 aa14.35□□□□□ -0.11
UPK1A-202ENST00000379013 TSSK4Q6SA08 328 aa14.35□□□□□ -0.11
UPK1A-202ENST00000379013 FAM131BQ86XD5 332 aa14.35□□□□□ -0.11
UPK1A-202ENST00000379013 VSIG1Q86XK7 387 aa14.35□□□□□ -0.11
UPK1A-202ENST00000379013 DEPDC1BQ8WUY9 529 aa14.35□□□□□ -0.11
UPK1A-202ENST00000379013 DNASE1L2Q92874 299 aa14.35□□□□□ -0.11
UPK1A-202ENST00000379013 SLC39A13Q96H72 371 aa14.35□□□□□ -0.11
UPK1A-202ENST00000379013 RBM41Q96IZ5 413 aaKnown RBP14.35□□□□□ -0.11
UPK1A-202ENST00000379013 EPAS1Q99814 870 aa14.35□□□□□ -0.11
UPK1A-202ENST00000379013 OSBPL6Q9BZF3 934 aa14.35□□□□□ -0.11
UPK1A-202ENST00000379013 RNF38Q9H0F5 515 aa14.35□□□□□ -0.11
UPK1A-202ENST00000379013 TKTL2Q9H0I9 626 aa14.35□□□□□ -0.11
UPK1A-202ENST00000379013 RETREG1Q9H6L5 497 aa14.35□□□□□ -0.11
UPK1A-202ENST00000379013 ZWILCHQ9H900 591 aa14.35□□□□□ -0.11
UPK1A-202ENST00000379013 SMPD4Q9NXE4 827 aa14.35□□□□□ -0.11
UPK1A-202ENST00000379013 ARHGEF38Q9NXL2 777 aa14.35□□□□□ -0.11
UPK1A-202ENST00000379013 GTSE1Q9NYZ3 720 aa14.35□□□□□ -0.11
UPK1A-202ENST00000379013 NDRG2Q9UN36 371 aaKnown RBP14.35□□□□□ -0.11
UPK1A-202ENST00000379013 PIAS3Q9Y6X2 628 aa14.35□□□□□ -0.11
UPK1A-202ENST00000379013 SDK1Q7Z5N4 2213 aa14.35□□□□□ -0.11
UPK1A-202ENST00000379013 COL4A2P08572 1712 aa14.35□□□□□ -0.11
UPK1A-202ENST00000379013 KIF26AQ9ULI4 1882 aaPredicted RBP14.34□□□□□ -0.11
UPK1A-202ENST00000379013 KCNU1A8MYU2 1149 aa14.34□□□□□ -0.11
UPK1A-202ENST00000379013 LEFTY2O00292 366 aa14.34□□□□□ -0.11
UPK1A-202ENST00000379013 CHADO15335 359 aa14.34□□□□□ -0.11
UPK1A-202ENST00000379013 STC2O76061 302 aa14.34□□□□□ -0.11
UPK1A-202ENST00000379013 CHRNB1P11230 501 aa14.34□□□□□ -0.11
UPK1A-202ENST00000379013 CTNNA2P26232 953 aa14.34□□□□□ -0.11
UPK1A-202ENST00000379013 CORO1AP31146 461 aaKnown RBP14.34□□□□□ -0.11
UPK1A-202ENST00000379013 CTNNA1P35221 906 aaKnown RBP14.34□□□□□ -0.11
UPK1A-202ENST00000379013 ADRA1BP35368 520 aa14.34□□□□□ -0.11
UPK1A-202ENST00000379013 ARL4AP40617 200 aa14.34□□□□□ -0.11
UPK1A-202ENST00000379013 RWDD2BP57060 319 aa14.34□□□□□ -0.11
UPK1A-202ENST00000379013 ZXDBP98169 803 aa14.34□□□□□ -0.11
UPK1A-202ENST00000379013 USP4Q13107 963 aa14.34□□□□□ -0.11
UPK1A-202ENST00000379013 MTAPQ13126 283 aa14.34□□□□□ -0.11
UPK1A-202ENST00000379013 PDK2Q15119 407 aa14.34□□□□□ -0.11
UPK1A-202ENST00000379013 RPS6KA1Q15418 735 aa14.34□□□□□ -0.11
UPK1A-202ENST00000379013 ZC3H12AQ5D1E8 599 aaKnown RBP14.34□□□□□ -0.11
UPK1A-202ENST00000379013 TTC39BQ5VTQ0 682 aaPredicted RBP14.34□□□□□ -0.11
UPK1A-202ENST00000379013 LRRC31Q6UY01 552 aa14.34□□□□□ -0.11
UPK1A-202ENST00000379013 ZNF852Q6ZMS4 543 aa14.34□□□□□ -0.11
UPK1A-202ENST00000379013 NT5DC3Q86UY8 548 aa14.34□□□□□ -0.11
UPK1A-202ENST00000379013 ZNF557Q8N988 423 aaPredicted RBP14.34□□□□□ -0.11
UPK1A-202ENST00000379013 SH3RF2Q8TEC5 729 aa14.34□□□□□ -0.11
UPK1A-202ENST00000379013 IRF7Q92985 503 aa14.34□□□□□ -0.11
UPK1A-202ENST00000379013 FCRL2Q96LA5 508 aaPredicted RBP14.34□□□□□ -0.11
UPK1A-202ENST00000379013 C1orf74Q96LT6 269 aa14.34□□□□□ -0.11
UPK1A-202ENST00000379013 IRF2BPLQ9H1B7 796 aa14.34□□□□□ -0.11
UPK1A-202ENST00000379013 PRDM16Q9HAZ2 1276 aa14.34□□□□□ -0.11
UPK1A-202ENST00000379013 HPS4Q9NQG7 708 aa14.34□□□□□ -0.11
UPK1A-202ENST00000379013 GKN1Q9NS71 199 aa14.34□□□□□ -0.11
UPK1A-202ENST00000379013 RBM12Q9NTZ6 932 aaKnown RBP14.34□□□□□ -0.11
UPK1A-202ENST00000379013 CFAP97Q9P2B7 532 aa14.34□□□□□ -0.11
UPK1A-202ENST00000379013 RCOR3Q9P2K3 495 aaPredicted RBP14.34□□□□□ -0.11
UPK1A-202ENST00000379013 PCSK1NQ9UHG2 260 aa14.34□□□□□ -0.11
UPK1A-202ENST00000379013 AP4E1Q9UPM8 1137 aa14.34□□□□□ -0.11
UPK1A-202ENST00000379013 DOCK4Q8N1I0 1966 aa14.34□□□□□ -0.11
UPK1A-202ENST00000379013 CTAGE9A4FU28 777 aa14.33□□□□□ -0.12
UPK1A-202ENST00000379013 USP27XA6NNY8 438 aa14.33□□□□□ -0.12
UPK1A-202ENST00000379013 F5H5T6 163 aa14.33□□□□□ -0.12
UPK1A-202ENST00000379013 CYBBP04839 570 aa14.33□□□□□ -0.12
UPK1A-202ENST00000379013 HMBSP08397 361 aa14.33□□□□□ -0.12
UPK1A-202ENST00000379013 IRF1P10914 325 aa14.33□□□□□ -0.12
UPK1A-202ENST00000379013 COPS2P61201 443 aa14.33□□□□□ -0.12
UPK1A-202ENST00000379013 ETF1P62495 437 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms