RNA–Protein interactions for RNA: ENST00000378735.5

KIF3A-201, Transcript of kinesin family member 3A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene KIF3A, Length 3,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-201ENST00000378735 ARFGAP1Q8N6T3 406 aa14.05□□□□□ -0.16
KIF3A-201ENST00000378735 DEPDC1BQ8WUY9 529 aa14.05□□□□□ -0.16
KIF3A-201ENST00000378735 PPP1R10Q96QC0 940 aaKnown RBP14.05□□□□□ -0.16
KIF3A-201ENST00000378735 WRNIP1Q96S55 665 aa14.05□□□□□ -0.16
KIF3A-201ENST00000378735 SDCBP2Q9H190 292 aa14.05□□□□□ -0.16
KIF3A-201ENST00000378735 DEFB129Q9H1M3 183 aa14.05□□□□□ -0.16
KIF3A-201ENST00000378735 COG4Q9H9E3 785 aa14.05□□□□□ -0.16
KIF3A-201ENST00000378735 PI4KBQ9UBF8 816 aa14.05□□□□□ -0.16
KIF3A-201ENST00000378735 IPO11Q9UI26 975 aaKnown RBP14.05□□□□□ -0.16
KIF3A-201ENST00000378735 PCDHGC3Q9UN70 934 aa14.05□□□□□ -0.16
KIF3A-201ENST00000378735 TMEM98Q9Y2Y6 226 aa14.05□□□□□ -0.16
KIF3A-201ENST00000378735 A0A1B0GTW7 788 aa14.04□□□□□ -0.16
KIF3A-201ENST00000378735 AIM2O14862 343 aa14.04□□□□□ -0.16
KIF3A-201ENST00000378735 POLR2BP30876 1174 aaKnown RBP14.04□□□□□ -0.16
KIF3A-201ENST00000378735 TMED10P49755 219 aaKnown RBP14.04□□□□□ -0.16
KIF3A-201ENST00000378735 HK2P52789 917 aa14.04□□□□□ -0.16
KIF3A-201ENST00000378735 TFDP2Q14188 446 aa14.04□□□□□ -0.16
KIF3A-201ENST00000378735 SMTNL2Q2TAL5 461 aa14.04□□□□□ -0.16
KIF3A-201ENST00000378735 CLVS1Q8IUQ0 354 aaPredicted RBP14.04□□□□□ -0.16
KIF3A-201ENST00000378735 C10orf107Q8IVU9 208 aa14.04□□□□□ -0.16
KIF3A-201ENST00000378735 CENPSQ8N2Z9 138 aa14.04□□□□□ -0.16
KIF3A-201ENST00000378735 CPSF7Q8N684 471 aaKnown RBP14.04□□□□□ -0.16
KIF3A-201ENST00000378735 THAP11Q96EK4 314 aa14.04□□□□□ -0.16
KIF3A-201ENST00000378735 SNX27Q96L92 541 aa14.04□□□□□ -0.16
KIF3A-201ENST00000378735 ZNF512Q96ME7 567 aaPredicted RBP14.04□□□□□ -0.16
KIF3A-201ENST00000378735 GPATCH1Q9BRR8 931 aaKnown RBP14.04□□□□□ -0.16
KIF3A-201ENST00000378735 MRPL40Q9NQ50 206 aaKnown RBP14.04□□□□□ -0.16
KIF3A-201ENST00000378735 KCNH7Q9NS40 1196 aa14.04□□□□□ -0.16
KIF3A-201ENST00000378735 MOCS1Q9NZB8 636 aa14.04□□□□□ -0.16
KIF3A-201ENST00000378735 COPG2Q9UBF2 871 aa14.04□□□□□ -0.16
KIF3A-201ENST00000378735 B3GNT3Q9Y2A9 372 aa14.04□□□□□ -0.16
KIF3A-201ENST00000378735 TMEM114B3SHH9 223 aa14.04□□□□□ -0.16
KIF3A-201ENST00000378735 MX2P20592 715 aa14.04□□□□□ -0.16
KIF3A-201ENST00000378735 CDH3P22223 829 aa14.04□□□□□ -0.16
KIF3A-201ENST00000378735 MS4A2Q01362 244 aa14.04□□□□□ -0.16
KIF3A-201ENST00000378735 MOGQ16653 247 aa14.04□□□□□ -0.16
KIF3A-201ENST00000378735 ANKDD1AQ495B1 522 aa14.04□□□□□ -0.16
KIF3A-201ENST00000378735 VWA5B1Q5TIE3 1220 aa14.04□□□□□ -0.16
KIF3A-201ENST00000378735 CCDC97Q96F63 343 aaPredicted RBP14.04□□□□□ -0.16
KIF3A-201ENST00000378735 TCHPQ9BT92 498 aa14.04□□□□□ -0.16
KIF3A-201ENST00000378735 ZC3H12CQ9C0D7 883 aaKnown RBP14.04□□□□□ -0.16
KIF3A-201ENST00000378735 SUN2Q9UH99 717 aa14.04□□□□□ -0.16
KIF3A-201ENST00000378735 TRIM64A6NGJ6 449 aa14.03□□□□□ -0.16
KIF3A-201ENST00000378735 H0YCG3 227 aa14.03□□□□□ -0.16
KIF3A-201ENST00000378735 PSMD12O00232 456 aaPredicted RBP14.03□□□□□ -0.16
KIF3A-201ENST00000378735 RNASEH2AO75792 299 aaKnown RBP14.03□□□□□ -0.16
KIF3A-201ENST00000378735 ITGB5P18084 799 aa14.03□□□□□ -0.16
KIF3A-201ENST00000378735 EPHA3P29320 983 aa14.03□□□□□ -0.16
KIF3A-201ENST00000378735 CEACAM7Q14002 265 aa14.03□□□□□ -0.16
KIF3A-201ENST00000378735 IRAK1BP1Q5VVH5 260 aa14.03□□□□□ -0.16
KIF3A-201ENST00000378735 FIBCD1Q8N539 461 aa14.03□□□□□ -0.16
KIF3A-201ENST00000378735 SIGLEC10Q96LC7 697 aa14.03□□□□□ -0.16
KIF3A-201ENST00000378735 TMEM79Q9BSE2 394 aa14.03□□□□□ -0.16
KIF3A-201ENST00000378735 TDRD1Q9BXT4 1180 aaKnown RBP14.03□□□□□ -0.16
KIF3A-201ENST00000378735 SCHIP1Q9P0W5 487 aaPredicted RBP14.03□□□□□ -0.16
KIF3A-201ENST00000378735 EBF1Q9UH73 591 aa14.03□□□□□ -0.16
KIF3A-201ENST00000378735 GPC6Q9Y625 555 aaPredicted RBP14.03□□□□□ -0.16
KIF3A-201ENST00000378735 H0YIN7 160 aa14.03□□□□□ -0.16
KIF3A-201ENST00000378735 GOLGA8TH3BQL2 631 aa14.03□□□□□ -0.16
KIF3A-201ENST00000378735 TADA2AO75478 443 aa14.03□□□□□ -0.16
KIF3A-201ENST00000378735 ENDOD1O94919 500 aa14.03□□□□□ -0.16
KIF3A-201ENST00000378735 MCF2P10911 925 aa14.03□□□□□ -0.16
KIF3A-201ENST00000378735 YBX3P16989 372 aaKnown RBP eCLIP14.03□□□□□ -0.16
KIF3A-201ENST00000378735 PDE1CQ14123 709 aaPredicted RBP14.03□□□□□ -0.16
KIF3A-201ENST00000378735 CCDC153Q494R4 210 aa14.03□□□□□ -0.16
KIF3A-201ENST00000378735 KCNT1Q5JUK3 1230 aa14.03□□□□□ -0.16
KIF3A-201ENST00000378735 ATG14Q6ZNE5 492 aa14.03□□□□□ -0.16
KIF3A-201ENST00000378735 SNX32Q86XE0 403 aa14.03□□□□□ -0.16
KIF3A-201ENST00000378735 TNIP2Q8NFZ5 429 aa14.03□□□□□ -0.16
KIF3A-201ENST00000378735 TBC1D15Q8TC07 691 aa14.03□□□□□ -0.16
KIF3A-201ENST00000378735 DUS3LQ96G46 650 aaKnown RBP14.03□□□□□ -0.16
KIF3A-201ENST00000378735 TCF7L2Q9NQB0 619 aa14.03□□□□□ -0.16
KIF3A-201ENST00000378735 HACD3Q9P035 362 aa14.03□□□□□ -0.16
KIF3A-201ENST00000378735 TRIM17Q9Y577 477 aa14.03□□□□□ -0.16
KIF3A-201ENST00000378735 H2AFYO75367 372 aaKnown RBP14.03□□□□□ -0.16
KIF3A-201ENST00000378735 ALDH1A2O94788 518 aa14.03□□□□□ -0.16
KIF3A-201ENST00000378735 FUCA1P04066 466 aa14.03□□□□□ -0.16
KIF3A-201ENST00000378735 KRT3P12035 628 aa14.03□□□□□ -0.16
KIF3A-201ENST00000378735 ARRB2P32121 409 aa14.03□□□□□ -0.16
KIF3A-201ENST00000378735 RFC1P35251 1148 aaPredicted RBP14.03□□□□□ -0.16
KIF3A-201ENST00000378735 XKR9Q5GH70 373 aa14.03□□□□□ -0.16
KIF3A-201ENST00000378735 STEAP4Q687X5 459 aa14.03□□□□□ -0.16
KIF3A-201ENST00000378735 KLHL32Q96NJ5 620 aa14.03□□□□□ -0.16
KIF3A-201ENST00000378735 CGREF1Q99674 301 aa14.03□□□□□ -0.16
KIF3A-201ENST00000378735 KIFC3Q9BVG8 833 aa14.03□□□□□ -0.16
KIF3A-201ENST00000378735 COQ10BQ9H8M1 238 aa14.03□□□□□ -0.16
KIF3A-201ENST00000378735 TRPV5Q9NQA5 729 aa14.03□□□□□ -0.16
KIF3A-201ENST00000378735 NUB1Q9Y5A7 615 aa14.03□□□□□ -0.16
KIF3A-201ENST00000378735 KLHL41O60662 606 aa14.02□□□□□ -0.16
KIF3A-201ENST00000378735 SULT1C4O75897 302 aa14.02□□□□□ -0.16
KIF3A-201ENST00000378735 TOP3BO95985 862 aaKnown RBP14.02□□□□□ -0.16
KIF3A-201ENST00000378735 ALDOAP04075 364 aaKnown RBP14.02□□□□□ -0.16
KIF3A-201ENST00000378735 EIF2AK2P19525 551 aaKnown RBP14.02□□□□□ -0.16
KIF3A-201ENST00000378735 PSMD8P48556 350 aa14.02□□□□□ -0.16
KIF3A-201ENST00000378735 RPS3AP61247 264 aaKnown RBP14.02□□□□□ -0.16
KIF3A-201ENST00000378735 ABCB5Q2M3G0 1257 aa14.02□□□□□ -0.16
KIF3A-201ENST00000378735 SHROOM1Q2M3G4 852 aaPredicted RBP14.02□□□□□ -0.16
KIF3A-201ENST00000378735 APOBEC3HQ6NTF7 200 aaKnown RBP14.02□□□□□ -0.16
KIF3A-201ENST00000378735 TRMT10BQ6PF06 316 aaKnown RBP14.02□□□□□ -0.16
KIF3A-201ENST00000378735 MAMDC4Q6UXC1 1216 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms