RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 DYNLT1P63172 113 aa16.3■□□□□ 0.2
CCDC107-204ENST00000378409 CKAP4Q07065 602 aaKnown RBP16.3■□□□□ 0.2
CCDC107-204ENST00000378409 AUHQ13825 339 aaKnown RBP16.3■□□□□ 0.2
CCDC107-204ENST00000378409 ACBD5Q5T8D3 534 aaPredicted RBP16.3■□□□□ 0.2
CCDC107-204ENST00000378409 RWDD4Q6NW29 188 aaKnown RBP16.3■□□□□ 0.2
CCDC107-204ENST00000378409 RFX8Q6ZV50 586 aa16.3■□□□□ 0.2
CCDC107-204ENST00000378409 C14orf80Q86SX3 495 aa16.3■□□□□ 0.2
CCDC107-204ENST00000378409 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.3■□□□□ 0.2
CCDC107-204ENST00000378409 FAF2Q96CS3 445 aa16.3■□□□□ 0.2
CCDC107-204ENST00000378409 TBC1D31Q96DN5 1066 aa16.3■□□□□ 0.2
CCDC107-204ENST00000378409 RNF157Q96PX1 679 aa16.3■□□□□ 0.2
CCDC107-204ENST00000378409 NAP1L3Q99457 506 aaPredicted RBP16.3■□□□□ 0.2
CCDC107-204ENST00000378409 GDE1Q9NZC3 331 aa16.3■□□□□ 0.2
CCDC107-204ENST00000378409 RNF14Q9UBS8 474 aa16.3■□□□□ 0.2
CCDC107-204ENST00000378409 CDH7Q9ULB5 785 aa16.3■□□□□ 0.2
CCDC107-204ENST00000378409 VANGL2Q9ULK5 521 aa16.3■□□□□ 0.2
CCDC107-204ENST00000378409 KIF26AQ9ULI4 1882 aaPredicted RBP16.3■□□□□ 0.2
CCDC107-204ENST00000378409 TCRBV7S2A1N4TA0A589 114 aa16.29■□□□□ 0.2
CCDC107-204ENST00000378409 ZNF487B1APH4 448 aa16.29■□□□□ 0.2
CCDC107-204ENST00000378409 F5H5T6 163 aa16.29■□□□□ 0.2
CCDC107-204ENST00000378409 GREM1O60565 184 aa16.29■□□□□ 0.2
CCDC107-204ENST00000378409 CST8O60676 142 aa16.29■□□□□ 0.2
CCDC107-204ENST00000378409 TJP3O95049 919 aa16.29■□□□□ 0.2
CCDC107-204ENST00000378409 LATS1O95835 1130 aa16.29■□□□□ 0.2
CCDC107-204ENST00000378409 KCNA5P22460 613 aa16.29■□□□□ 0.2
CCDC107-204ENST00000378409 AMPD1P23109 780 aa16.29■□□□□ 0.2
CCDC107-204ENST00000378409 EPHB2P29323 1055 aa16.29■□□□□ 0.2
CCDC107-204ENST00000378409 WEE1P30291 646 aa16.29■□□□□ 0.2
CCDC107-204ENST00000378409 SLC6A4P31645 630 aa16.29■□□□□ 0.2
CCDC107-204ENST00000378409 GBP2P32456 591 aaPredicted RBP16.29■□□□□ 0.2
CCDC107-204ENST00000378409 HCAR3P49019 387 aa16.29■□□□□ 0.2
CCDC107-204ENST00000378409 NRG1Q02297 640 aaPredicted RBP16.29■□□□□ 0.2
CCDC107-204ENST00000378409 ADCY2Q08462 1091 aa16.29■□□□□ 0.2
CCDC107-204ENST00000378409 DPYSQ14117 519 aa16.29■□□□□ 0.2
CCDC107-204ENST00000378409 TFDP2Q14188 446 aa16.29■□□□□ 0.2
CCDC107-204ENST00000378409 ZNF77Q15935 545 aa16.29■□□□□ 0.2
CCDC107-204ENST00000378409 FAM133BQ5BKY9 247 aaKnown RBP16.29■□□□□ 0.2
CCDC107-204ENST00000378409 FAM78AQ5JUQ0 283 aa16.29■□□□□ 0.2
CCDC107-204ENST00000378409 ADGRF1Q5T601 910 aa16.29■□□□□ 0.2
CCDC107-204ENST00000378409 MANEALQ5VSG8 457 aa16.29■□□□□ 0.2
CCDC107-204ENST00000378409 RFWD3Q6PCD5 774 aa16.29■□□□□ 0.2
CCDC107-204ENST00000378409 LRRC31Q6UY01 552 aa16.29■□□□□ 0.2
CCDC107-204ENST00000378409 Q6ZNB5 142 aa16.29■□□□□ 0.2
CCDC107-204ENST00000378409 HTR3DQ70Z44 454 aa16.29■□□□□ 0.2
CCDC107-204ENST00000378409 LGI2Q8N0V4 545 aa16.29■□□□□ 0.2
CCDC107-204ENST00000378409 PCDH19Q8TAB3 1148 aa16.29■□□□□ 0.2
CCDC107-204ENST00000378409 SMARCD2Q92925 531 aa16.29■□□□□ 0.2
CCDC107-204ENST00000378409 ASB16Q96NS5 453 aa16.29■□□□□ 0.2
CCDC107-204ENST00000378409 NECTIN4Q96NY8 510 aa16.29■□□□□ 0.2
CCDC107-204ENST00000378409 PRMT1Q99873 361 aaKnown RBP16.29■□□□□ 0.2
CCDC107-204ENST00000378409 DDX50Q9BQ39 737 aaKnown RBP16.29■□□□□ 0.2
CCDC107-204ENST00000378409 POMKQ9H5K3 350 aa16.29■□□□□ 0.2
CCDC107-204ENST00000378409 UBE2ZQ9H832 354 aaPredicted RBP16.29■□□□□ 0.2
CCDC107-204ENST00000378409 KIF9Q9HAQ2 790 aa16.29■□□□□ 0.2
CCDC107-204ENST00000378409 ARHGEF4Q9NR80 690 aa16.29■□□□□ 0.2
CCDC107-204ENST00000378409 STIM2Q9P246 746 aa16.29■□□□□ 0.2
CCDC107-204ENST00000378409 EFR3BQ9Y2G0 817 aa16.29■□□□□ 0.2
CCDC107-204ENST00000378409 ZNF510Q9Y2H8 683 aa16.29■□□□□ 0.2
CCDC107-204ENST00000378409 USP15Q9Y4E8 981 aaPredicted RBP16.29■□□□□ 0.2
CCDC107-204ENST00000378409 E2F8A0AVK6 867 aa16.28■□□□□ 0.2
CCDC107-204ENST00000378409 TRDMT1O14717 391 aaKnown RBP16.28■□□□□ 0.2
CCDC107-204ENST00000378409 APOL1O14791 398 aa16.28■□□□□ 0.2
CCDC107-204ENST00000378409 HTR7P34969 479 aa16.28■□□□□ 0.2
CCDC107-204ENST00000378409 USP4Q13107 963 aa16.28■□□□□ 0.2
CCDC107-204ENST00000378409 FBXL22Q6P050 247 aa16.28■□□□□ 0.2
CCDC107-204ENST00000378409 BBS12Q6ZW61 710 aa16.28■□□□□ 0.2
CCDC107-204ENST00000378409 BBS7Q8IWZ6 715 aa16.28■□□□□ 0.2
CCDC107-204ENST00000378409 ZNF683Q8IZ20 524 aa16.28■□□□□ 0.2
CCDC107-204ENST00000378409 CELF5Q8N6W0 485 aaKnown RBP16.28■□□□□ 0.2
CCDC107-204ENST00000378409 PQLC3Q8N755 202 aa16.28■□□□□ 0.2
CCDC107-204ENST00000378409 RIN3Q8TB24 985 aa16.28■□□□□ 0.2
CCDC107-204ENST00000378409 MAIP1Q8WWC4 291 aa16.28■□□□□ 0.2
CCDC107-204ENST00000378409 RPRD1AQ96P16 312 aaPredicted RBP16.28■□□□□ 0.2
CCDC107-204ENST00000378409 MYADMQ96S97 322 aa16.28■□□□□ 0.2
CCDC107-204ENST00000378409 AP1M1Q9BXS5 423 aa16.28■□□□□ 0.2
CCDC107-204ENST00000378409 L2HGDHQ9H9P8 463 aa16.28■□□□□ 0.2
CCDC107-204ENST00000378409 NEU3Q9UQ49 428 aa16.28■□□□□ 0.2
CCDC107-204ENST00000378409 COL6A3P12111 3177 aa16.27■□□□□ 0.2
CCDC107-204ENST00000378409 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.27■□□□□ 0.2
CCDC107-204ENST00000378409 KRIT1O00522 736 aa16.27■□□□□ 0.2
CCDC107-204ENST00000378409 FGF10O15520 208 aaPredicted RBP16.27■□□□□ 0.2
CCDC107-204ENST00000378409 TSPAN3O60637 253 aa16.27■□□□□ 0.2
CCDC107-204ENST00000378409 TCF3P15923 654 aa16.27■□□□□ 0.2
CCDC107-204ENST00000378409 VIPR2P41587 438 aa16.27■□□□□ 0.2
CCDC107-204ENST00000378409 VCPP55072 806 aaKnown RBP16.27■□□□□ 0.2
CCDC107-204ENST00000378409 KLF1Q13351 362 aaPredicted RBP16.27■□□□□ 0.2
CCDC107-204ENST00000378409 SLC9A4Q6AI14 798 aa16.27■□□□□ 0.2
CCDC107-204ENST00000378409 C1orf228Q6PIY5 440 aa16.27■□□□□ 0.2
CCDC107-204ENST00000378409 SUSD6Q92537 303 aa16.27■□□□□ 0.2
CCDC107-204ENST00000378409 IGSF8Q969P0 613 aa16.27■□□□□ 0.2
CCDC107-204ENST00000378409 HAUS1Q96CS2 278 aa16.27■□□□□ 0.2
CCDC107-204ENST00000378409 CARD6Q9BX69 1037 aa16.27■□□□□ 0.2
CCDC107-204ENST00000378409 ZYG11BQ9C0D3 744 aa16.27■□□□□ 0.2
CCDC107-204ENST00000378409 CATSPERBQ9H7T0 1116 aa16.27■□□□□ 0.2
CCDC107-204ENST00000378409 ETNK2Q9NVF9 386 aa16.27■□□□□ 0.2
CCDC107-204ENST00000378409 MPP6Q9NZW5 540 aa16.27■□□□□ 0.2
CCDC107-204ENST00000378409 STOML2Q9UJZ1 356 aa16.27■□□□□ 0.2
CCDC107-204ENST00000378409 NYNRINQ9P2P1 1898 aaKnown RBP16.27■□□□□ 0.19
CCDC107-204ENST00000378409 CHD5Q8TDI0 1954 aa16.26■□□□□ 0.19
CCDC107-204ENST00000378409 IGLV3-10A0A075B6K4 115 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms