RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 MAGEB5Q9BZ81 275 aa17.08■□□□□ 0.33
PCDHA1-201ENST00000378133 SMARCAD1Q9H4L7 1026 aa17.08■□□□□ 0.33
PCDHA1-201ENST00000378133 XAB2Q9HCS7 855 aaKnown RBP17.08■□□□□ 0.33
PCDHA1-201ENST00000378133 APOBEC2Q9Y235 224 aaKnown RBP17.08■□□□□ 0.33
PCDHA1-201ENST00000378133 SSC5DA1L4H1 1573 aa17.08■□□□□ 0.33
PCDHA1-201ENST00000378133 hCG_2014768A0A024R1R8 64 aa17.08■□□□□ 0.32
PCDHA1-201ENST00000378133 BCLAF3A2AJT9 711 aaKnown RBP17.08■□□□□ 0.32
PCDHA1-201ENST00000378133 VILLO15195 856 aa17.08■□□□□ 0.32
PCDHA1-201ENST00000378133 AP1G1O43747 822 aa17.08■□□□□ 0.32
PCDHA1-201ENST00000378133 HBP1O60381 514 aa17.08■□□□□ 0.32
PCDHA1-201ENST00000378133 RPL5P46777 297 aaKnown RBP17.08■□□□□ 0.32
PCDHA1-201ENST00000378133 TMEM132DQ14C87 1099 aa17.08■□□□□ 0.32
PCDHA1-201ENST00000378133 GOLGA7BQ2TAP0 167 aa17.08■□□□□ 0.32
PCDHA1-201ENST00000378133 TMEM259Q4ZIN3 620 aa17.08■□□□□ 0.32
PCDHA1-201ENST00000378133 RABGAP1LQ5R372 815 aa17.08■□□□□ 0.32
PCDHA1-201ENST00000378133 PPP1R26Q5T8A7 1209 aaPredicted RBP17.08■□□□□ 0.32
PCDHA1-201ENST00000378133 SMYD5Q6GMV2 418 aa17.08■□□□□ 0.32
PCDHA1-201ENST00000378133 PGM2L1Q6PCE3 622 aa17.08■□□□□ 0.32
PCDHA1-201ENST00000378133 B3GNT6Q6ZMB0 384 aa17.08■□□□□ 0.32
PCDHA1-201ENST00000378133 PRICKLE1Q96MT3 831 aaPredicted RBP17.08■□□□□ 0.32
PCDHA1-201ENST00000378133 BTBD9Q96Q07 612 aa17.08■□□□□ 0.32
PCDHA1-201ENST00000378133 NT5C1AQ9BXI3 368 aa17.08■□□□□ 0.32
PCDHA1-201ENST00000378133 PDZD7Q9H5P4 517 aa17.08■□□□□ 0.32
PCDHA1-201ENST00000378133 ASB7Q9H672 318 aa17.08■□□□□ 0.32
PCDHA1-201ENST00000378133 RMI1Q9H9A7 625 aa17.08■□□□□ 0.32
PCDHA1-201ENST00000378133 GPRC5DQ9NZD1 345 aa17.08■□□□□ 0.32
PCDHA1-201ENST00000378133 CDH22Q9UJ99 828 aa17.08■□□□□ 0.32
PCDHA1-201ENST00000378133 TOP3BO95985 862 aaKnown RBP17.07■□□□□ 0.32
PCDHA1-201ENST00000378133 CLPTM1O96005 669 aa17.07■□□□□ 0.32
PCDHA1-201ENST00000378133 GRIA1P42261 906 aa17.07■□□□□ 0.32
PCDHA1-201ENST00000378133 RPL26P61254 145 aaKnown RBP17.07■□□□□ 0.32
PCDHA1-201ENST00000378133 OLFML2BQ68BL8 750 aa17.07■□□□□ 0.32
PCDHA1-201ENST00000378133 SLC9A4Q6AI14 798 aa17.07■□□□□ 0.32
PCDHA1-201ENST00000378133 GPC2Q8N158 579 aa17.07■□□□□ 0.32
PCDHA1-201ENST00000378133 SHCBP1LQ9BZQ2 653 aa17.07■□□□□ 0.32
PCDHA1-201ENST00000378133 POMPQ9Y244 141 aa17.07■□□□□ 0.32
PCDHA1-201ENST00000378133 POLR2AP24928 1970 aaKnown RBP17.07■□□□□ 0.32
PCDHA1-201ENST00000378133 HMX2A2RU54 273 aa17.07■□□□□ 0.32
PCDHA1-201ENST00000378133 BIRC5O15392 142 aa17.07■□□□□ 0.32
PCDHA1-201ENST00000378133 KRT38O76015 456 aa17.07■□□□□ 0.32
PCDHA1-201ENST00000378133 MCF2P10911 925 aa17.07■□□□□ 0.32
PCDHA1-201ENST00000378133 TFE3P19532 575 aaPredicted RBP17.07■□□□□ 0.32
PCDHA1-201ENST00000378133 SDC4P31431 198 aa17.07■□□□□ 0.32
PCDHA1-201ENST00000378133 INCA1Q0VD86 236 aa17.07■□□□□ 0.32
PCDHA1-201ENST00000378133 AMHR2Q16671 573 aa17.07■□□□□ 0.32
PCDHA1-201ENST00000378133 TCHHL1Q5QJ38 904 aaPredicted RBP17.07■□□□□ 0.32
PCDHA1-201ENST00000378133 OLFML1Q6UWY5 402 aa17.07■□□□□ 0.32
PCDHA1-201ENST00000378133 ACTRT2Q8TDY3 377 aa17.07■□□□□ 0.32
PCDHA1-201ENST00000378133 KHSRPQ92945 711 aaKnown RBP eCLIP17.07■□□□□ 0.32
PCDHA1-201ENST00000378133 SIGLEC10Q96LC7 697 aa17.07■□□□□ 0.32
PCDHA1-201ENST00000378133 B3GNT5Q9BYG0 378 aa17.07■□□□□ 0.32
PCDHA1-201ENST00000378133 PDGFCQ9NRA1 345 aa17.07■□□□□ 0.32
PCDHA1-201ENST00000378133 DPP3Q9NY33 737 aa17.07■□□□□ 0.32
PCDHA1-201ENST00000378133 NR2E3Q9Y5X4 410 aa17.07■□□□□ 0.32
PCDHA1-201ENST00000378133 MCM3APO60318 1980 aa17.07■□□□□ 0.32
PCDHA1-201ENST00000378133 ATP6V1G1O75348 118 aa17.06■□□□□ 0.32
PCDHA1-201ENST00000378133 SMIM18P0DKX4 95 aa17.06■□□□□ 0.32
PCDHA1-201ENST00000378133 TXNP10599 105 aaKnown RBP17.06■□□□□ 0.32
PCDHA1-201ENST00000378133 ARF4P18085 180 aaPredicted RBP17.06■□□□□ 0.32
PCDHA1-201ENST00000378133 PHKA2P46019 1235 aa17.06■□□□□ 0.32
PCDHA1-201ENST00000378133 TNFAIP2Q03169 654 aa17.06■□□□□ 0.32
PCDHA1-201ENST00000378133 GBE1Q04446 702 aa17.06■□□□□ 0.32
PCDHA1-201ENST00000378133 TUBB3Q13509 450 aa17.06■□□□□ 0.32
PCDHA1-201ENST00000378133 HPS6Q86YV9 775 aa17.06■□□□□ 0.32
PCDHA1-201ENST00000378133 EFCAB3Q8N7B9 438 aa17.06■□□□□ 0.32
PCDHA1-201ENST00000378133 PIWIL2Q8TC59 973 aaKnown RBP17.06■□□□□ 0.32
PCDHA1-201ENST00000378133 MMP19Q99542 508 aa17.06■□□□□ 0.32
PCDHA1-201ENST00000378133 FAM49BQ9NUQ9 324 aa17.06■□□□□ 0.32
PCDHA1-201ENST00000378133 RHBDL2Q9NX52 303 aa17.06■□□□□ 0.32
PCDHA1-201ENST00000378133 DNAJC16Q9Y2G8 782 aa17.06■□□□□ 0.32
PCDHA1-201ENST00000378133 MYO18AQ92614 2054 aaKnown RBP17.06■□□□□ 0.32
PCDHA1-201ENST00000378133 CAPN8A6NHC0 703 aa17.06■□□□□ 0.32
PCDHA1-201ENST00000378133 C22orf31O95567 290 aa17.06■□□□□ 0.32
PCDHA1-201ENST00000378133 TFAP2AP05549 437 aa17.06■□□□□ 0.32
PCDHA1-201ENST00000378133 CRHR1P34998 444 aa17.06■□□□□ 0.32
PCDHA1-201ENST00000378133 ATXN1P54253 815 aaKnown RBP17.06■□□□□ 0.32
PCDHA1-201ENST00000378133 SLC10A2Q12908 348 aaPredicted RBP17.06■□□□□ 0.32
PCDHA1-201ENST00000378133 CBLBQ13191 982 aa17.06■□□□□ 0.32
PCDHA1-201ENST00000378133 ZNF534Q76KX8 674 aa17.06■□□□□ 0.32
PCDHA1-201ENST00000378133 ARCQ7LC44 396 aa17.06■□□□□ 0.32
PCDHA1-201ENST00000378133 TMC7Q7Z402 723 aa17.06■□□□□ 0.32
PCDHA1-201ENST00000378133 ACOT1Q86TX2 421 aa17.06■□□□□ 0.32
PCDHA1-201ENST00000378133 TTC30AQ86WT1 665 aa17.06■□□□□ 0.32
PCDHA1-201ENST00000378133 CCDC97Q96F63 343 aaPredicted RBP17.06■□□□□ 0.32
PCDHA1-201ENST00000378133 NRDE2Q9H7Z3 1164 aa17.06■□□□□ 0.32
PCDHA1-201ENST00000378133 DDX18Q9NVP1 670 aaKnown RBP17.06■□□□□ 0.32
PCDHA1-201ENST00000378133 RNF181Q9P0P0 153 aa17.06■□□□□ 0.32
PCDHA1-201ENST00000378133 ITGA11Q9UKX5 1188 aa17.06■□□□□ 0.32
PCDHA1-201ENST00000378133 INPP5FQ9Y2H2 1132 aa17.06■□□□□ 0.32
PCDHA1-201ENST00000378133 DTNAQ9Y4J8 743 aa17.06■□□□□ 0.32
PCDHA1-201ENST00000378133 GMEB1Q9Y692 573 aa17.06■□□□□ 0.32
PCDHA1-201ENST00000378133 PEX1O43933 1283 aa17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 SIN3BO75182 1162 aa17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 LYPLA1O75608 230 aaPredicted RBP17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 VTNP04004 478 aa17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 INSRRP14616 1297 aa17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 CYP2F1P24903 491 aa17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 FDFT1P37268 417 aa17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 MAGEA6P43360 314 aa17.05■□□□□ 0.32
PCDHA1-201ENST00000378133 HDAC4P56524 1084 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms