RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 FAM159BA6NKW6 160 aa16.08■□□□□ 0.17
CSNK1A1-202ENST00000377843 PPEF1O14829 653 aaPredicted RBP16.08■□□□□ 0.17
CSNK1A1-202ENST00000377843 RFC1P35251 1148 aaPredicted RBP16.08■□□□□ 0.17
CSNK1A1-202ENST00000377843 GRM5P41594 1212 aa16.08■□□□□ 0.17
CSNK1A1-202ENST00000377843 MMRN1Q13201 1228 aa16.08■□□□□ 0.17
CSNK1A1-202ENST00000377843 TMEM214Q6NUQ4 689 aaKnown RBP16.08■□□□□ 0.17
CSNK1A1-202ENST00000377843 RWDD4Q6NW29 188 aaKnown RBP16.08■□□□□ 0.17
CSNK1A1-202ENST00000377843 C15orf52Q6ZUT6 534 aaKnown RBP16.08■□□□□ 0.17
CSNK1A1-202ENST00000377843 ZNF781Q8N8C0 355 aa16.08■□□□□ 0.17
CSNK1A1-202ENST00000377843 JOSD2Q8TAC2 188 aa16.08■□□□□ 0.17
CSNK1A1-202ENST00000377843 AGR3Q8TD06 166 aa16.08■□□□□ 0.17
CSNK1A1-202ENST00000377843 RCN3Q96D15 328 aa16.08■□□□□ 0.17
CSNK1A1-202ENST00000377843 CAMKK2Q96RR4 588 aa16.08■□□□□ 0.17
CSNK1A1-202ENST00000377843 NAA50Q9GZZ1 169 aaKnown RBP16.08■□□□□ 0.17
CSNK1A1-202ENST00000377843 HIPK3Q9H422 1215 aa16.08■□□□□ 0.17
CSNK1A1-202ENST00000377843 NYAP2Q9P242 653 aa16.08■□□□□ 0.17
CSNK1A1-202ENST00000377843 GOLGA8QA0A0J9YX86 632 aa16.08■□□□□ 0.16
CSNK1A1-202ENST00000377843 GOLGA8OA6NCC3 632 aa16.08■□□□□ 0.16
CSNK1A1-202ENST00000377843 GOLGA8NF8WBI6 632 aa16.08■□□□□ 0.16
CSNK1A1-202ENST00000377843 TRDMT1O14717 391 aaKnown RBP16.08■□□□□ 0.16
CSNK1A1-202ENST00000377843 SULT1C4O75897 302 aa16.08■□□□□ 0.16
CSNK1A1-202ENST00000377843 ABCE1P61221 599 aaKnown RBP16.08■□□□□ 0.16
CSNK1A1-202ENST00000377843 TUBA4AP68366 448 aa16.08■□□□□ 0.16
CSNK1A1-202ENST00000377843 BNIP3Q12983 259 aa16.08■□□□□ 0.16
CSNK1A1-202ENST00000377843 EGFLAMQ63HQ2 1017 aa16.08■□□□□ 0.16
CSNK1A1-202ENST00000377843 SLC9A4Q6AI14 798 aa16.08■□□□□ 0.16
CSNK1A1-202ENST00000377843 DARS2Q6PI48 645 aaKnown RBP16.08■□□□□ 0.16
CSNK1A1-202ENST00000377843 EPGNQ6UW88 154 aa16.08■□□□□ 0.16
CSNK1A1-202ENST00000377843 WDTC1Q8N5D0 677 aa16.08■□□□□ 0.16
CSNK1A1-202ENST00000377843 KYQ8NBH2 561 aa16.08■□□□□ 0.16
CSNK1A1-202ENST00000377843 LRTOMTQ8WZ04 291 aa16.08■□□□□ 0.16
CSNK1A1-202ENST00000377843 THAP11Q96EK4 314 aa16.08■□□□□ 0.16
CSNK1A1-202ENST00000377843 AGAP3Q96P47 875 aa16.08■□□□□ 0.16
CSNK1A1-202ENST00000377843 SERPINI1Q99574 410 aa16.08■□□□□ 0.16
CSNK1A1-202ENST00000377843 VPS45Q9NRW7 570 aa16.08■□□□□ 0.16
CSNK1A1-202ENST00000377843 PNPLA3Q9NST1 481 aa16.08■□□□□ 0.16
CSNK1A1-202ENST00000377843 PCSK1NQ9UHG2 260 aa16.08■□□□□ 0.16
CSNK1A1-202ENST00000377843 CNOT11Q9UKZ1 510 aaKnown RBP16.08■□□□□ 0.16
CSNK1A1-202ENST00000377843 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 H3BMQ9 156 aa16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 APOC4-APOC2K7ER74 178 aa16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 PIK3R2O00459 728 aa16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 MCF2LO15068 1137 aa16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 CHADO15335 359 aa16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 BCAS2O75934 225 aaPredicted RBP16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 APOC2P02655 101 aa16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 C4BPAP04003 597 aaKnown RBP16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 OSBPP22059 807 aa16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 GLDCP23378 1020 aa16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 HARS2P49590 506 aaKnown RBP16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 BMXP51813 675 aa16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 SMAD1Q15797 465 aaKnown RBP16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 ZACNQ401N2 412 aa16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 ZBED5Q49AG3 693 aa16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 SNRNP48Q6IEG0 339 aaKnown RBP16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 NIPAL1Q6NVV3 410 aa16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 TTLL6Q8N841 843 aa16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 NIPA2Q8N8Q9 360 aa16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 SCAIQ8N9R8 606 aa16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 CASP10Q92851 521 aa16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 ITPKCQ96DU7 683 aa16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 PPP1R36Q96LQ0 422 aa16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 COG8Q96MW5 612 aa16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 ZNF341Q9BYN7 854 aa16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 ZNF358Q9NW07 568 aa16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 NUB1Q9Y5A7 615 aa16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 GPC6Q9Y625 555 aaPredicted RBP16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 TPP1O14773 563 aa16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 ENO3P13929 434 aaPredicted RBP16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 ITGB5P18084 799 aa16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 PSMA2P25787 234 aa16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 TCF7P36402 384 aaPredicted RBP16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 RAB15P59190 212 aa16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 ROR1Q01973 937 aa16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 PPM1JQ5JR12 505 aa16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 AARS2Q5JTZ9 985 aaKnown RBP16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 KRT80Q6KB66 452 aa16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 GPD1LQ8N335 351 aa16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 TRPC4APQ8TEL6 797 aa16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 APBB2Q92870 758 aa16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 MOCOSQ96EN8 888 aa16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 WDR55Q9H6Y2 383 aaPredicted RBP16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 CLK4Q9HAZ1 481 aaKnown RBP16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 RBAKQ9NYW8 714 aaPredicted RBP16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 NCKIPSDQ9NZQ3 722 aa16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 PRR12Q9ULL5 1215 aa16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 RBMX2Q9Y388 322 aaKnown RBP16.07■□□□□ 0.16
CSNK1A1-202ENST00000377843 GPR25O00155 361 aa16.06■□□□□ 0.16
CSNK1A1-202ENST00000377843 C8BP07358 591 aa16.06■□□□□ 0.16
CSNK1A1-202ENST00000377843 PAX3P23760 479 aa16.06■□□□□ 0.16
CSNK1A1-202ENST00000377843 YWHABP31946 246 aaKnown RBP16.06■□□□□ 0.16
CSNK1A1-202ENST00000377843 JAG1P78504 1218 aa16.06■□□□□ 0.16
CSNK1A1-202ENST00000377843 FSCBQ5H9T9 825 aa16.06■□□□□ 0.16
CSNK1A1-202ENST00000377843 C6orf183Q5T699 404 aa16.06■□□□□ 0.16
CSNK1A1-202ENST00000377843 C16orf87Q6PH81 154 aa16.06■□□□□ 0.16
CSNK1A1-202ENST00000377843 TIFABQ6ZNK6 161 aa16.06■□□□□ 0.16
CSNK1A1-202ENST00000377843 FAM47BQ8NA70 645 aa16.06■□□□□ 0.16
CSNK1A1-202ENST00000377843 FRMD8P1Q9BZ68 369 aaPredicted RBP16.06■□□□□ 0.16
CSNK1A1-202ENST00000377843 TMEM216Q9P0N5 145 aa16.06■□□□□ 0.16
CSNK1A1-202ENST00000377843 ARHGAP28Q9P2N2 729 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms