RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 MFSD14CQ5VZR4 134 aa12□□□□□ -0.49
DDR1-227ENST00000376570 OVOS1Q6IE37 1185 aa12□□□□□ -0.49
DDR1-227ENST00000376570 TRNP1Q6NT89 227 aa12□□□□□ -0.49
DDR1-227ENST00000376570 TAPT1Q6NXT6 567 aa12□□□□□ -0.49
DDR1-227ENST00000376570 SLC26A11Q86WA9 606 aa12□□□□□ -0.49
DDR1-227ENST00000376570 WDR75Q8IWA0 830 aaKnown RBP12□□□□□ -0.49
DDR1-227ENST00000376570 ARRDC4Q8NCT1 418 aa12□□□□□ -0.49
DDR1-227ENST00000376570 USP13Q92995 863 aaPredicted RBP12□□□□□ -0.49
DDR1-227ENST00000376570 RPRD1AQ96P16 312 aaPredicted RBP12□□□□□ -0.49
DDR1-227ENST00000376570 C16orf70Q9BSU1 422 aa12□□□□□ -0.49
DDR1-227ENST00000376570 SP110Q9HB58 689 aa12□□□□□ -0.49
DDR1-227ENST00000376570 XPNPEP3Q9NQH7 507 aa12□□□□□ -0.49
DDR1-227ENST00000376570 AFF4Q9UHB7 1163 aaKnown RBP12□□□□□ -0.49
DDR1-227ENST00000376570 APOBEC2Q9Y235 224 aaKnown RBP12□□□□□ -0.49
DDR1-227ENST00000376570 CRYL1Q9Y2S2 319 aa12□□□□□ -0.49
DDR1-227ENST00000376570 C10orf71Q711Q0 1435 aa12□□□□□ -0.49
DDR1-227ENST00000376570 FAM72CH0Y354 149 aa11.99□□□□□ -0.49
DDR1-227ENST00000376570 KIF1CO43896 1103 aaKnown RBP11.99□□□□□ -0.49
DDR1-227ENST00000376570 CHRNA4P43681 627 aa11.99□□□□□ -0.49
DDR1-227ENST00000376570 TCHHL1Q5QJ38 904 aaPredicted RBP11.99□□□□□ -0.49
DDR1-227ENST00000376570 FAM72AQ5TYM5 149 aa11.99□□□□□ -0.49
DDR1-227ENST00000376570 FAM72DQ6L9T8 149 aa11.99□□□□□ -0.49
DDR1-227ENST00000376570 UNC5AQ6ZN44 842 aa11.99□□□□□ -0.49
DDR1-227ENST00000376570 FAM72BQ86X60 149 aa11.99□□□□□ -0.49
DDR1-227ENST00000376570 CDC26Q8NHZ8 85 aa11.99□□□□□ -0.49
DDR1-227ENST00000376570 OLIG1Q8TAK6 271 aa11.99□□□□□ -0.49
DDR1-227ENST00000376570 EPAS1Q99814 870 aa11.99□□□□□ -0.49
DDR1-227ENST00000376570 CYP3A43Q9HB55 503 aa11.99□□□□□ -0.49
DDR1-227ENST00000376570 CHRAC1Q9NRG0 131 aa11.99□□□□□ -0.49
DDR1-227ENST00000376570 SMG5Q9UPR3 1016 aaKnown RBP11.99□□□□□ -0.49
DDR1-227ENST00000376570 CLUHO75153 1309 aa11.99□□□□□ -0.49
DDR1-227ENST00000376570 LAMB1P07942 1786 aa11.99□□□□□ -0.49
DDR1-227ENST00000376570 GARSP41250 739 aaKnown RBP11.99□□□□□ -0.49
DDR1-227ENST00000376570 CPT1AP50416 773 aa11.99□□□□□ -0.49
DDR1-227ENST00000376570 PRAMEP78395 509 aa11.99□□□□□ -0.49
DDR1-227ENST00000376570 RPS6KA2Q15349 733 aa11.99□□□□□ -0.49
DDR1-227ENST00000376570 YTHDF3Q7Z739 585 aaKnown RBP11.99□□□□□ -0.49
DDR1-227ENST00000376570 DCBLD1Q8N8Z6 715 aa11.99□□□□□ -0.49
DDR1-227ENST00000376570 PIP4K2CQ8TBX8 421 aa11.99□□□□□ -0.49
DDR1-227ENST00000376570 ABCG8Q9H221 673 aa11.99□□□□□ -0.49
DDR1-227ENST00000376570 RBM22Q9NW64 420 aaKnown RBP eCLIP11.99□□□□□ -0.492e-7■■■□□ 16.7
DDR1-227ENST00000376570 PPP1R12AO14974 1030 aaPredicted RBP11.99□□□□□ -0.49
DDR1-227ENST00000376570 ITGB6P18564 788 aa11.99□□□□□ -0.49
DDR1-227ENST00000376570 SLC25A11Q02978 314 aaKnown RBP11.99□□□□□ -0.49
DDR1-227ENST00000376570 RCN1Q15293 331 aa11.99□□□□□ -0.49
DDR1-227ENST00000376570 DCAF4L1Q3SXM0 396 aa11.99□□□□□ -0.49
DDR1-227ENST00000376570 TTC39BQ5VTQ0 682 aaPredicted RBP11.99□□□□□ -0.49
DDR1-227ENST00000376570 USP50Q70EL3 339 aaPredicted RBP11.99□□□□□ -0.49
DDR1-227ENST00000376570 THEM5Q8N1Q8 247 aa11.99□□□□□ -0.49
DDR1-227ENST00000376570 PCED1BQ96HM7 432 aa11.99□□□□□ -0.49
DDR1-227ENST00000376570 POLR2AP24928 1970 aaKnown RBP11.99□□□□□ -0.49
DDR1-227ENST00000376570 ATP6AP2A0A1C7CYW4 349 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 FCHO1O14526 889 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 ATP6AP2O75787 350 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 CCR10P46092 362 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 GPR15P49685 360 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 NCALDP61601 193 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 SLC25A3Q00325 362 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 PTP4A2Q12974 167 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 RASA2Q15283 850 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 CHSY1Q86X52 802 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 GBP7Q8N8V2 638 aaPredicted RBP11.98□□□□□ -0.49
DDR1-227ENST00000376570 MYLPFQ96A32 169 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 DDX50Q9BQ39 737 aaKnown RBP11.98□□□□□ -0.49
DDR1-227ENST00000376570 VCXQ9H320 206 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 FLRT1Q9NZU1 646 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 AXIN1O15169 862 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 ALOX15BO15296 676 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 TPST1O60507 370 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 ATG7O95352 703 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 PRKCGP05129 697 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 NPR3P17342 541 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 CRYMQ14894 314 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 RBBP5Q15291 538 aaKnown RBP11.98□□□□□ -0.49
DDR1-227ENST00000376570 RABGAP1LQ5R372 815 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 FAM171A1Q5VUB5 890 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 ZNF280DQ6N043 979 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 PPP1R2P3Q6NXS1 205 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 CDHR3Q6ZTQ4 885 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 PTPN18Q99952 460 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 PNPOQ9NVS9 261 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 ADA2Q9NZK5 511 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 RABGEF1Q9UJ41 708 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 SDR42E2A6NKP2 422 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 C3orf70A6NLC5 250 aaPredicted RBP11.98□□□□□ -0.49
DDR1-227ENST00000376570 SPECC1L-ADORA2AF8WAN1 911 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 STRNO43815 780 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 LTFP02788 710 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 ITGAVP06756 1048 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 KLRC2P26717 231 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 WEE1P30291 646 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 SLC10A2Q12908 348 aaPredicted RBP11.98□□□□□ -0.49
DDR1-227ENST00000376570 KLF1Q13351 362 aaPredicted RBP11.98□□□□□ -0.49
DDR1-227ENST00000376570 CSHL1Q14406 222 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 PDK1Q15118 436 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 ATG16L1Q676U5 607 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 LCLAT1Q6UWP7 414 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 C16orf59Q7L2K0 433 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 ANKRD52Q8NB46 1076 aa11.98□□□□□ -0.49
DDR1-227ENST00000376570 OR6K2Q8NGY2 324 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms