RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 H3BRB1 525 aa10.97□□□□□ -0.65
ABCF1-202ENST00000376545 HCRTO43612 131 aa10.97□□□□□ -0.65
ABCF1-202ENST00000376545 MFSD11O43934 449 aa10.97□□□□□ -0.65
ABCF1-202ENST00000376545 SERPINE1P05121 402 aa10.97□□□□□ -0.65
ABCF1-202ENST00000376545 ITGA2BP08514 1039 aa10.97□□□□□ -0.65
ABCF1-202ENST00000376545 MYL4P12829 197 aa10.97□□□□□ -0.65
ABCF1-202ENST00000376545 CCDC130P13994 396 aa10.97□□□□□ -0.65
ABCF1-202ENST00000376545 ANPEPP15144 967 aa10.97□□□□□ -0.65
ABCF1-202ENST00000376545 GRK2P25098 689 aa10.97□□□□□ -0.65
ABCF1-202ENST00000376545 ARRB2P32121 409 aa10.97□□□□□ -0.65
ABCF1-202ENST00000376545 PCBP1Q15365 356 aaKnown RBP eCLIP10.97□□□□□ -0.653e-9■■■■■ 30.2
ABCF1-202ENST00000376545 GRIK4Q16099 956 aa10.97□□□□□ -0.65
ABCF1-202ENST00000376545 PGM2L1Q6PCE3 622 aa10.97□□□□□ -0.65
ABCF1-202ENST00000376545 FASTKD5Q7L8L6 764 aaKnown RBP10.97□□□□□ -0.65
ABCF1-202ENST00000376545 WDR75Q8IWA0 830 aaKnown RBP10.97□□□□□ -0.65
ABCF1-202ENST00000376545 OR6B3Q8NGW1 331 aa10.97□□□□□ -0.65
ABCF1-202ENST00000376545 CDKL2Q92772 493 aa10.97□□□□□ -0.65
ABCF1-202ENST00000376545 P2RY11Q96G91 374 aa10.97□□□□□ -0.65
ABCF1-202ENST00000376545 LGMNQ99538 433 aa10.97□□□□□ -0.65
ABCF1-202ENST00000376545 ZNF184Q99676 751 aaPredicted RBP10.97□□□□□ -0.65
ABCF1-202ENST00000376545 FAM96AQ9H5X1 160 aa10.97□□□□□ -0.65
ABCF1-202ENST00000376545 TUT1Q9H6E5 874 aaKnown RBP10.97□□□□□ -0.65
ABCF1-202ENST00000376545 ADARB2Q9NS39 739 aaKnown RBP10.97□□□□□ -0.65
ABCF1-202ENST00000376545 MARCOQ9UEW3 520 aaPredicted RBP10.97□□□□□ -0.65
ABCF1-202ENST00000376545 ANGPTL2Q9UKU9 493 aa10.97□□□□□ -0.65
ABCF1-202ENST00000376545 SOX13Q9UN79 622 aa10.97□□□□□ -0.65
ABCF1-202ENST00000376545 NR2E3Q9Y5X4 410 aa10.97□□□□□ -0.65
ABCF1-202ENST00000376545 PSAT1Q9Y617 370 aa10.97□□□□□ -0.65
ABCF1-202ENST00000376545 KLHL2O95198 593 aa10.97□□□□□ -0.65
ABCF1-202ENST00000376545 LMO2P25791 158 aa10.97□□□□□ -0.65
ABCF1-202ENST00000376545 CRABP2P29373 138 aa10.97□□□□□ -0.65
ABCF1-202ENST00000376545 CCNHP51946 323 aaPredicted RBP10.97□□□□□ -0.65
ABCF1-202ENST00000376545 ALDH18A1P54886 795 aaKnown RBP10.97□□□□□ -0.65
ABCF1-202ENST00000376545 SESN3P58005 492 aa10.97□□□□□ -0.65
ABCF1-202ENST00000376545 UBAP2LQ14157 1087 aaKnown RBP10.97□□□□□ -0.65
ABCF1-202ENST00000376545 GSTA3Q16772 222 aa10.97□□□□□ -0.65
ABCF1-202ENST00000376545 AAGABQ6PD74 315 aa10.97□□□□□ -0.65
ABCF1-202ENST00000376545 ZNF467Q7Z7K2 595 aaPredicted RBP10.97□□□□□ -0.65
ABCF1-202ENST00000376545 TSPAN18Q96SJ8 248 aa10.97□□□□□ -0.65
ABCF1-202ENST00000376545 GORASP1Q9BQQ3 440 aa10.97□□□□□ -0.65
ABCF1-202ENST00000376545 MCMBPQ9BTE3 642 aa10.97□□□□□ -0.65
ABCF1-202ENST00000376545 EIF2AQ9BY44 585 aaKnown RBP10.97□□□□□ -0.65
ABCF1-202ENST00000376545 SLC17A6Q9P2U8 582 aa10.97□□□□□ -0.65
ABCF1-202ENST00000376545 DNAJC16Q9Y2G8 782 aa10.97□□□□□ -0.65
ABCF1-202ENST00000376545 XPO1O14980 1071 aaKnown RBP10.96□□□□□ -0.65
ABCF1-202ENST00000376545 CCNT2O60583 730 aaKnown RBP10.96□□□□□ -0.65
ABCF1-202ENST00000376545 DAB1O75553 588 aa10.96□□□□□ -0.65
ABCF1-202ENST00000376545 LYPLA1O75608 230 aaPredicted RBP10.96□□□□□ -0.65
ABCF1-202ENST00000376545 PDHA1P08559 390 aa10.96□□□□□ -0.65
ABCF1-202ENST00000376545 SP100P23497 879 aaPredicted RBP10.96□□□□□ -0.65
ABCF1-202ENST00000376545 MGAT1P26572 445 aa10.96□□□□□ -0.65
ABCF1-202ENST00000376545 ARL4AP40617 200 aa10.96□□□□□ -0.65
ABCF1-202ENST00000376545 CSRP3P50461 194 aa10.96□□□□□ -0.65
ABCF1-202ENST00000376545 KDSRQ06136 332 aa10.96□□□□□ -0.65
ABCF1-202ENST00000376545 DPYSQ14117 519 aa10.96□□□□□ -0.65
ABCF1-202ENST00000376545 C16orf46Q6P387 395 aa10.96□□□□□ -0.65
ABCF1-202ENST00000376545 DTX3LQ8TDB6 740 aa10.96□□□□□ -0.65
ABCF1-202ENST00000376545 UCMAQ8WVF2 138 aa10.96□□□□□ -0.65
ABCF1-202ENST00000376545 CLPTM1LQ96KA5 538 aa10.96□□□□□ -0.65
ABCF1-202ENST00000376545 NPY6RQ99463 290 aa10.96□□□□□ -0.65
ABCF1-202ENST00000376545 COPG2Q9UBF2 871 aa10.96□□□□□ -0.65
ABCF1-202ENST00000376545 ADAM28Q9UKQ2 775 aa10.96□□□□□ -0.65
ABCF1-202ENST00000376545 RNF103O00237 685 aa10.96□□□□□ -0.66
ABCF1-202ENST00000376545 DCLK1O15075 740 aa10.96□□□□□ -0.66
ABCF1-202ENST00000376545 SPTLC1O15269 473 aa10.96□□□□□ -0.66
ABCF1-202ENST00000376545 BUD23O43709 281 aaKnown RBP10.96□□□□□ -0.66
ABCF1-202ENST00000376545 FKBP6O75344 327 aa10.96□□□□□ -0.66
ABCF1-202ENST00000376545 ZNF189O75820 626 aaPredicted RBP10.96□□□□□ -0.66
ABCF1-202ENST00000376545 LCP1P13796 627 aa10.96□□□□□ -0.66
ABCF1-202ENST00000376545 IDH3AP50213 366 aa10.96□□□□□ -0.66
ABCF1-202ENST00000376545 ZRSR2Q15696 482 aaKnown RBP10.96□□□□□ -0.66
ABCF1-202ENST00000376545 SPANXN3Q5MJ09 141 aa10.96□□□□□ -0.66
ABCF1-202ENST00000376545 GRTP1Q5TC63 336 aa10.96□□□□□ -0.66
ABCF1-202ENST00000376545 TMEM154Q6P9G4 183 aa10.96□□□□□ -0.66
ABCF1-202ENST00000376545 CCDC33Q8N5R6 958 aa10.96□□□□□ -0.66
ABCF1-202ENST00000376545 DCPSQ96C86 337 aaKnown RBP10.96□□□□□ -0.66
ABCF1-202ENST00000376545 CPNE1Q99829 537 aa10.96□□□□□ -0.66
ABCF1-202ENST00000376545 THTPAQ9BU02 230 aa10.96□□□□□ -0.66
ABCF1-202ENST00000376545 SYBUQ9NX95 663 aa10.96□□□□□ -0.66
ABCF1-202ENST00000376545 UBQLN1Q9UMX0 589 aaKnown RBP10.96□□□□□ -0.66
ABCF1-202ENST00000376545 MAP3K7O43318 606 aa10.95□□□□□ -0.66
ABCF1-202ENST00000376545 SIN3BO75182 1162 aa10.95□□□□□ -0.66
ABCF1-202ENST00000376545 C6orf222P0C671 652 aaPredicted RBP10.95□□□□□ -0.66
ABCF1-202ENST00000376545 GNL1P36915 607 aaPredicted RBP10.95□□□□□ -0.66
ABCF1-202ENST00000376545 RPL10AP62906 217 aaKnown RBP10.95□□□□□ -0.66
ABCF1-202ENST00000376545 CRADDP78560 199 aa10.95□□□□□ -0.66
ABCF1-202ENST00000376545 CDC42EP1Q00587 391 aa10.95□□□□□ -0.66
ABCF1-202ENST00000376545 HNRNPDQ14103 355 aaKnown RBP10.95□□□□□ -0.66
ABCF1-202ENST00000376545 FBXO47Q5MNV8 452 aa10.95□□□□□ -0.66
ABCF1-202ENST00000376545 DPY19L2Q6NUT2 758 aa10.95□□□□□ -0.66
ABCF1-202ENST00000376545 CLEC14AQ86T13 490 aa10.95□□□□□ -0.66
ABCF1-202ENST00000376545 C10orf107Q8IVU9 208 aa10.95□□□□□ -0.66
ABCF1-202ENST00000376545 DEFB106AQ8N104 65 aa10.95□□□□□ -0.66
ABCF1-202ENST00000376545 ZNF567Q8N184 647 aa10.95□□□□□ -0.66
ABCF1-202ENST00000376545 PPFIBP2Q8ND30 876 aa10.95□□□□□ -0.66
ABCF1-202ENST00000376545 SLC7A14Q8TBB6 771 aa10.95□□□□□ -0.66
ABCF1-202ENST00000376545 KCTD13Q8WZ19 329 aa10.95□□□□□ -0.66
ABCF1-202ENST00000376545 ATP2A3Q93084 1043 aa10.95□□□□□ -0.66
ABCF1-202ENST00000376545 SLC2A13Q96QE2 648 aa10.95□□□□□ -0.66
ABCF1-202ENST00000376545 NR1H4Q96RI1 486 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms