RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 PPP1R26Q5T8A7 1209 aaPredicted RBP13.7□□□□□ -0.22
CLCN6-205ENST00000376492 SCUBE3Q8IX30 993 aa13.7□□□□□ -0.22
CLCN6-205ENST00000376492 CPXM2Q8N436 756 aa13.7□□□□□ -0.22
CLCN6-205ENST00000376492 ZNF276Q8N554 614 aa13.7□□□□□ -0.22
CLCN6-205ENST00000376492 PDCD7Q8N8D1 485 aaKnown RBP13.7□□□□□ -0.22
CLCN6-205ENST00000376492 FBXL13Q8NEE6 735 aa13.7□□□□□ -0.22
CLCN6-205ENST00000376492 SEMA4DQ92854 862 aa13.7□□□□□ -0.22
CLCN6-205ENST00000376492 IGSF8Q969P0 613 aa13.7□□□□□ -0.22
CLCN6-205ENST00000376492 SLC35C1Q96A29 364 aa13.7□□□□□ -0.22
CLCN6-205ENST00000376492 CDK5RAP1Q96SZ6 601 aaKnown RBP13.7□□□□□ -0.22
CLCN6-205ENST00000376492 ARID3AQ99856 593 aa13.7□□□□□ -0.22
CLCN6-205ENST00000376492 ORAI3Q9BRQ5 295 aa13.7□□□□□ -0.22
CLCN6-205ENST00000376492 DUSP16Q9BY84 665 aa13.7□□□□□ -0.22
CLCN6-205ENST00000376492 IMPG2Q9BZV3 1241 aa13.7□□□□□ -0.22
CLCN6-205ENST00000376492 DCLK3Q9C098 648 aa13.7□□□□□ -0.22
CLCN6-205ENST00000376492 TMEM245Q9H330 911 aa13.7□□□□□ -0.22
CLCN6-205ENST00000376492 RAB20Q9NX57 234 aa13.7□□□□□ -0.22
CLCN6-205ENST00000376492 RWDD2AQ9UIY3 292 aa13.7□□□□□ -0.22
CLCN6-205ENST00000376492 COQ4Q9Y3A0 265 aa13.7□□□□□ -0.22
CLCN6-205ENST00000376492 KNL1Q8NG31 2342 aa13.7□□□□□ -0.22
CLCN6-205ENST00000376492 CKAP5Q14008 2032 aa13.69□□□□□ -0.22
CLCN6-205ENST00000376492 CBX4O00257 560 aa13.69□□□□□ -0.22
CLCN6-205ENST00000376492 PMM2O15305 246 aa13.69□□□□□ -0.22
CLCN6-205ENST00000376492 TSPAN3O60637 253 aa13.69□□□□□ -0.22
CLCN6-205ENST00000376492 C1QL1O75973 258 aa13.69□□□□□ -0.22
CLCN6-205ENST00000376492 GNA14O95837 355 aa13.69□□□□□ -0.22
CLCN6-205ENST00000376492 TRIM21P19474 475 aaKnown RBP13.69□□□□□ -0.22
CLCN6-205ENST00000376492 ITPKBP27987 946 aa13.69□□□□□ -0.22
CLCN6-205ENST00000376492 CTSKP43235 329 aa13.69□□□□□ -0.22
CLCN6-205ENST00000376492 ABCG1P45844 678 aa13.69□□□□□ -0.22
CLCN6-205ENST00000376492 MARSP56192 900 aaKnown RBP13.69□□□□□ -0.22
CLCN6-205ENST00000376492 STX17P56962 302 aa13.69□□□□□ -0.22
CLCN6-205ENST00000376492 RPS14P62263 151 aaKnown RBP13.69□□□□□ -0.22
CLCN6-205ENST00000376492 CBWD6Q4V339 395 aa13.69□□□□□ -0.22
CLCN6-205ENST00000376492 CT47A1Q5JQC4 288 aaPredicted RBP13.69□□□□□ -0.22
CLCN6-205ENST00000376492 CBWD3Q5JTY5 395 aa13.69□□□□□ -0.22
CLCN6-205ENST00000376492 CBWD5Q5RIA9 395 aa13.69□□□□□ -0.22
CLCN6-205ENST00000376492 RSRC2Q7L4I2 434 aaKnown RBP13.69□□□□□ -0.22
CLCN6-205ENST00000376492 FAM217AQ8IXS0 508 aa13.69□□□□□ -0.22
CLCN6-205ENST00000376492 CCDC150Q8NCX0 1101 aa13.69□□□□□ -0.22
CLCN6-205ENST00000376492 SRRTQ9BXP5 876 aaKnown RBP13.69□□□□□ -0.22
CLCN6-205ENST00000376492 SLC2A11Q9BYW1 496 aa13.69□□□□□ -0.22
CLCN6-205ENST00000376492 BTBD1Q9H0C5 482 aa13.69□□□□□ -0.22
CLCN6-205ENST00000376492 MMRN2Q9H8L6 949 aa13.69□□□□□ -0.22
CLCN6-205ENST00000376492 CYP3A43Q9HB55 503 aa13.69□□□□□ -0.22
CLCN6-205ENST00000376492 ABCB8Q9NUT2 735 aa13.69□□□□□ -0.22
CLCN6-205ENST00000376492 FTSJ1Q9UET6 329 aa13.69□□□□□ -0.22
CLCN6-205ENST00000376492 KALRNO60229 2985 aa13.69□□□□□ -0.22
CLCN6-205ENST00000376492 NUMA1Q14980 2115 aa13.69□□□□□ -0.22
CLCN6-205ENST00000376492 MUC22E2RYF6 1773 aaPredicted RBP13.68□□□□□ -0.22
CLCN6-205ENST00000376492 TIMM44O43615 452 aa13.68□□□□□ -0.22
CLCN6-205ENST00000376492 FGFR1OPO95684 399 aaKnown RBP13.68□□□□□ -0.22
CLCN6-205ENST00000376492 CD27P26842 260 aa13.68□□□□□ -0.22
CLCN6-205ENST00000376492 SGSHP51688 502 aa13.68□□□□□ -0.22
CLCN6-205ENST00000376492 YWHAGP61981 247 aaKnown RBP eCLIP13.68□□□□□ -0.22
CLCN6-205ENST00000376492 CCDC40Q4G0X9 1142 aa13.68□□□□□ -0.22
CLCN6-205ENST00000376492 DCAF17Q5H9S7 520 aaPredicted RBP13.68□□□□□ -0.22
CLCN6-205ENST00000376492 PRAMEF14Q5SWL7 426 aa13.68□□□□□ -0.22
CLCN6-205ENST00000376492 TCERG1LQ5VWI1 586 aa13.68□□□□□ -0.22
CLCN6-205ENST00000376492 CHST9Q7L1S5 443 aa13.68□□□□□ -0.22
CLCN6-205ENST00000376492 ADAT2Q7Z6V5 191 aaKnown RBP13.68□□□□□ -0.22
CLCN6-205ENST00000376492 ADIPOR2Q86V24 386 aa13.68□□□□□ -0.22
CLCN6-205ENST00000376492 PIGZQ86VD9 579 aa13.68□□□□□ -0.22
CLCN6-205ENST00000376492 GATAD2AQ86YP4 633 aa13.68□□□□□ -0.22
CLCN6-205ENST00000376492 NDRG1Q92597 394 aaKnown RBP13.68□□□□□ -0.22
CLCN6-205ENST00000376492 MED15Q96RN5 788 aa13.68□□□□□ -0.22
CLCN6-205ENST00000376492 UBL7Q96S82 380 aaPredicted RBP13.68□□□□□ -0.22
CLCN6-205ENST00000376492 NIF3L1Q9GZT8 377 aa13.68□□□□□ -0.22
CLCN6-205ENST00000376492 MTG2Q9H4K7 406 aa13.68□□□□□ -0.22
CLCN6-205ENST00000376492 OSGEPQ9NPF4 335 aa13.68□□□□□ -0.22
CLCN6-205ENST00000376492 PRSS16Q9NQE7 514 aa13.68□□□□□ -0.22
CLCN6-205ENST00000376492 STRIP2Q9ULQ0 834 aa13.68□□□□□ -0.22
CLCN6-205ENST00000376492 GOLGA4Q13439 2230 aaKnown RBP13.68□□□□□ -0.22
CLCN6-205ENST00000376492 CABIN1Q9Y6J0 2220 aa13.67□□□□□ -0.22
CLCN6-205ENST00000376492 IGHV4-34P06331 123 aa13.67□□□□□ -0.22
CLCN6-205ENST00000376492 BCAT1P54687 386 aa13.67□□□□□ -0.22
CLCN6-205ENST00000376492 DNAJC3Q13217 504 aa13.67□□□□□ -0.22
CLCN6-205ENST00000376492 E2F5Q15329 346 aa13.67□□□□□ -0.22
CLCN6-205ENST00000376492 MPPE1Q53F39 396 aa13.67□□□□□ -0.22
CLCN6-205ENST00000376492 BHLHA9Q7RTU4 235 aa13.67□□□□□ -0.22
CLCN6-205ENST00000376492 FMNL3Q8IVF7 1028 aa13.67□□□□□ -0.22
CLCN6-205ENST00000376492 TRIM59Q8IWR1 403 aa13.67□□□□□ -0.22
CLCN6-205ENST00000376492 WFDC5Q8TCV5 224 aa13.67□□□□□ -0.22
CLCN6-205ENST00000376492 COL26A1Q96A83 441 aa13.67□□□□□ -0.22
CLCN6-205ENST00000376492 PLD4Q96BZ4 506 aa13.67□□□□□ -0.22
CLCN6-205ENST00000376492 SLC6A18Q96N87 628 aa13.67□□□□□ -0.22
CLCN6-205ENST00000376492 GGA2Q9UJY4 613 aa13.67□□□□□ -0.22
CLCN6-205ENST00000376492 MYH10P35580 1976 aa13.67□□□□□ -0.22
CLCN6-205ENST00000376492 TMEM131Q92545 1883 aa13.66□□□□□ -0.22
CLCN6-205ENST00000376492 FAM47DPA6NHR8 397 aa13.66□□□□□ -0.22
CLCN6-205ENST00000376492 TULP2O00295 520 aa13.66□□□□□ -0.22
CLCN6-205ENST00000376492 P4HA2O15460 535 aa13.66□□□□□ -0.22
CLCN6-205ENST00000376492 TLX3O43711 291 aaPredicted RBP13.66□□□□□ -0.22
CLCN6-205ENST00000376492 DNTTP04053 509 aa13.66□□□□□ -0.22
CLCN6-205ENST00000376492 C7P10643 843 aa13.66□□□□□ -0.22
CLCN6-205ENST00000376492 ERCC5P28715 1186 aaPredicted RBP13.66□□□□□ -0.22
CLCN6-205ENST00000376492 FMO5P49326 533 aa13.66□□□□□ -0.22
CLCN6-205ENST00000376492 TRIP4Q15650 581 aaPredicted RBP13.66□□□□□ -0.22
CLCN6-205ENST00000376492 INAVAQ3KP66 663 aa13.66□□□□□ -0.22
CLCN6-205ENST00000376492 RAB41Q5JT25 222 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms