RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 CMPK2Q5EBM0 449 aa14.4□□□□□ -0.1
MSH5-202ENST00000375740 SNX30Q5VWJ9 437 aa14.4□□□□□ -0.1
MSH5-202ENST00000375740 HEATR6Q6AI08 1181 aaKnown RBP14.4□□□□□ -0.1
MSH5-202ENST00000375740 RGS9BPQ6ZS82 235 aa14.4□□□□□ -0.1
MSH5-202ENST00000375740 C3orf58Q8NDZ4 430 aa14.4□□□□□ -0.1
MSH5-202ENST00000375740 TFB1MQ8WVM0 346 aaKnown RBP14.4□□□□□ -0.1
MSH5-202ENST00000375740 SCG3Q8WXD2 468 aaKnown RBP14.4□□□□□ -0.1
MSH5-202ENST00000375740 KCNK16Q96T55 309 aa14.4□□□□□ -0.1
MSH5-202ENST00000375740 MIPEPQ99797 713 aa14.4□□□□□ -0.1
MSH5-202ENST00000375740 PLAC1Q9HBJ0 212 aa14.4□□□□□ -0.1
MSH5-202ENST00000375740 ARHGEF4Q9NR80 690 aa14.4□□□□□ -0.1
MSH5-202ENST00000375740 TTLL3Q9Y4R7 772 aa14.4□□□□□ -0.1
MSH5-202ENST00000375740 ARL5CA6NH57 179 aa14.39□□□□□ -0.11
MSH5-202ENST00000375740 CAPN15O75808 1086 aa14.39□□□□□ -0.11
MSH5-202ENST00000375740 FAM155BO75949 473 aa14.39□□□□□ -0.11
MSH5-202ENST00000375740 INHBAP08476 426 aa14.39□□□□□ -0.11
MSH5-202ENST00000375740 VAV1P15498 845 aa14.39□□□□□ -0.11
MSH5-202ENST00000375740 SETDB1Q15047 1291 aa14.39□□□□□ -0.11
MSH5-202ENST00000375740 AGMOQ6ZNB7 445 aa14.39□□□□□ -0.11
MSH5-202ENST00000375740 ZNF534Q76KX8 674 aa14.39□□□□□ -0.11
MSH5-202ENST00000375740 BNIPLQ7Z465 357 aa14.39□□□□□ -0.11
MSH5-202ENST00000375740 PSTKQ8IV42 348 aaKnown RBP14.39□□□□□ -0.11
MSH5-202ENST00000375740 LRRC8CQ8TDW0 803 aa14.39□□□□□ -0.11
MSH5-202ENST00000375740 HTR3CQ8WXA8 447 aa14.39□□□□□ -0.11
MSH5-202ENST00000375740 SERAC1Q96JX3 654 aa14.39□□□□□ -0.11
MSH5-202ENST00000375740 SLC2A13Q96QE2 648 aa14.39□□□□□ -0.11
MSH5-202ENST00000375740 LGMNQ99538 433 aa14.39□□□□□ -0.11
MSH5-202ENST00000375740 SMOQ99835 787 aa14.39□□□□□ -0.11
MSH5-202ENST00000375740 ULBP1Q9BZM6 244 aa14.39□□□□□ -0.11
MSH5-202ENST00000375740 SENP6Q9GZR1 1112 aaPredicted RBP14.39□□□□□ -0.11
MSH5-202ENST00000375740 AGO3Q9H9G7 860 aaKnown RBP14.39□□□□□ -0.11
MSH5-202ENST00000375740 CHST12Q9NRB3 414 aa14.39□□□□□ -0.11
MSH5-202ENST00000375740 STAP1Q9ULZ2 295 aa14.39□□□□□ -0.11
MSH5-202ENST00000375740 ZNF638Q14966 1978 aaKnown RBP14.39□□□□□ -0.11
MSH5-202ENST00000375740 C1QAP02745 245 aa14.39□□□□□ -0.11
MSH5-202ENST00000375740 FYNP06241 537 aa14.39□□□□□ -0.11
MSH5-202ENST00000375740 CYBAP13498 195 aa14.39□□□□□ -0.11
MSH5-202ENST00000375740 ADRA1DP25100 572 aa14.39□□□□□ -0.11
MSH5-202ENST00000375740 GRIA1P42261 906 aa14.39□□□□□ -0.11
MSH5-202ENST00000375740 LHX1P48742 406 aa14.39□□□□□ -0.11
MSH5-202ENST00000375740 SCNN1GP51170 649 aa14.39□□□□□ -0.11
MSH5-202ENST00000375740 CACNA2D1P54289 1103 aa14.39□□□□□ -0.11
MSH5-202ENST00000375740 DEUP1Q05D60 604 aa14.39□□□□□ -0.11
MSH5-202ENST00000375740 SEPT7Q16181 437 aaKnown RBP14.39□□□□□ -0.11
MSH5-202ENST00000375740 IRGCQ6NXR0 463 aa14.39□□□□□ -0.11
MSH5-202ENST00000375740 HACE1Q8IYU2 909 aa14.39□□□□□ -0.11
MSH5-202ENST00000375740 PPM1NQ8N819 430 aa14.39□□□□□ -0.11
MSH5-202ENST00000375740 RNF169Q8NCN4 708 aa14.39□□□□□ -0.11
MSH5-202ENST00000375740 DTX3LQ8TDB6 740 aa14.39□□□□□ -0.11
MSH5-202ENST00000375740 RNF139Q8WU17 664 aa14.39□□□□□ -0.11
MSH5-202ENST00000375740 ZNF75CPQ92670 426 aaPredicted RBP14.39□□□□□ -0.11
MSH5-202ENST00000375740 ALKBH8Q96BT7 664 aaKnown RBP14.39□□□□□ -0.11
MSH5-202ENST00000375740 PCED1BQ96HM7 432 aa14.39□□□□□ -0.11
MSH5-202ENST00000375740 SIGLEC10Q96LC7 697 aa14.39□□□□□ -0.11
MSH5-202ENST00000375740 OLFM3Q96PB7 478 aa14.39□□□□□ -0.11
MSH5-202ENST00000375740 PAAF1Q9BRP4 392 aa14.39□□□□□ -0.11
MSH5-202ENST00000375740 ARHGAP39Q9C0H5 1083 aa14.39□□□□□ -0.11
MSH5-202ENST00000375740 PIGVQ9NUD9 493 aa14.39□□□□□ -0.11
MSH5-202ENST00000375740 RCOR3Q9P2K3 495 aaPredicted RBP14.39□□□□□ -0.11
MSH5-202ENST00000375740 SLC17A7Q9P2U7 560 aa14.39□□□□□ -0.11
MSH5-202ENST00000375740 STARD13Q9Y3M8 1113 aa14.39□□□□□ -0.11
MSH5-202ENST00000375740 WDR91A4D1P6 747 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 CASTOR2A6NHX0 329 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 CXorf49A8MYA2 514 aaPredicted RBP14.38□□□□□ -0.11
MSH5-202ENST00000375740 CREB3O43889 395 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 MFSD11O43934 449 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 KRT36O76013 467 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 SERPINB4P48594 390 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 SERINC5Q86VE9 423 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 CTAGE3PQ8IX95 158 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 TMEM86AQ8N2M4 240 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 MPP5Q8N3R9 675 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 FAM81AQ8TBF8 368 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 TRIB2Q92519 343 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 TRIM56Q9BRZ2 755 aaKnown RBP14.38□□□□□ -0.11
MSH5-202ENST00000375740 VCXQ9H320 206 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 TMEM30AQ9NV96 361 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 SCOCQ9UIL1 159 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 GABRQQ9UN88 632 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 YJEFN3A6XGL0 299 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 HACD1B0YJ81 288 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 F5H423 210 aaPredicted RBP14.38□□□□□ -0.11
MSH5-202ENST00000375740 H3BRJ5 948 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 TRDMT1O14717 391 aaKnown RBP14.38□□□□□ -0.11
MSH5-202ENST00000375740 SLC10A3P09131 477 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 TPSB2P20231 275 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 RCN1Q15293 331 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 TPSAB1Q15661 275 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 TAF1BQ53T94 588 aaPredicted RBP14.38□□□□□ -0.11
MSH5-202ENST00000375740 DENND5BQ6ZUT9 1274 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 GPRIN1Q7Z2K8 1008 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 TRIM74Q86UV6 250 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 TRIM73Q86UV7 250 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 FAM35AQ86V20 835 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 SLC26A11Q86WA9 606 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 ZMIZ2Q8NF64 920 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 ADAM32Q8TC27 787 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 INPP5DQ92835 1189 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 FAM210AQ96ND0 272 aa14.38□□□□□ -0.11
MSH5-202ENST00000375740 MAD1L1Q9Y6D9 718 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms