RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 UBAP1Q9NZ09 502 aa21.71■■□□□ 1.07
UPF3A-202ENST00000375299 PCDHB12Q9Y5F1 795 aa21.71■■□□□ 1.07
UPF3A-202ENST00000375299 ZNF487B1APH4 448 aa21.7■■□□□ 1.07
UPF3A-202ENST00000375299 ADCY6O43306 1168 aa21.7■■□□□ 1.07
UPF3A-202ENST00000375299 MLNP12872 115 aa21.7■■□□□ 1.07
UPF3A-202ENST00000375299 HMGCS2P54868 508 aa21.7■■□□□ 1.07
UPF3A-202ENST00000375299 CRADDP78560 199 aa21.7■■□□□ 1.07
UPF3A-202ENST00000375299 CNGA3Q16281 694 aa21.7■■□□□ 1.07
UPF3A-202ENST00000375299 TMEM259Q4ZIN3 620 aa21.7■■□□□ 1.07
UPF3A-202ENST00000375299 PPM1JQ5JR12 505 aa21.7■■□□□ 1.07
UPF3A-202ENST00000375299 EEF1DP3Q658K8 133 aa21.7■■□□□ 1.07
UPF3A-202ENST00000375299 SAMD7Q7Z3H4 446 aa21.7■■□□□ 1.07
UPF3A-202ENST00000375299 CDR2LQ86X02 465 aaPredicted RBP21.7■■□□□ 1.07
UPF3A-202ENST00000375299 TMEM192Q8IY95 271 aa21.7■■□□□ 1.07
UPF3A-202ENST00000375299 FAM210AQ96ND0 272 aa21.7■■□□□ 1.07
UPF3A-202ENST00000375299 MRPS26Q9BYN8 205 aaKnown RBP21.7■■□□□ 1.07
UPF3A-202ENST00000375299 CDH19Q9H159 772 aa21.7■■□□□ 1.07
UPF3A-202ENST00000375299 C2orf40Q9H1Z8 148 aa21.7■■□□□ 1.07
UPF3A-202ENST00000375299 PLK2Q9NYY3 685 aa21.7■■□□□ 1.07
UPF3A-202ENST00000375299 MORF4L1Q9UBU8 362 aa21.7■■□□□ 1.07
UPF3A-202ENST00000375299 STK39Q9UEW8 545 aa21.7■■□□□ 1.07
UPF3A-202ENST00000375299 HACL1Q9UJ83 578 aa21.7■■□□□ 1.07
UPF3A-202ENST00000375299 LZTS1Q9Y250 596 aa21.7■■□□□ 1.07
UPF3A-202ENST00000375299 PSAT1Q9Y617 370 aa21.7■■□□□ 1.07
UPF3A-202ENST00000375299 CDY2AQ9Y6F7 541 aa21.7■■□□□ 1.07
UPF3A-202ENST00000375299 CDY1Q9Y6F8 540 aa21.7■■□□□ 1.07
UPF3A-202ENST00000375299 E9PBE3 544 aa21.7■■□□□ 1.06
UPF3A-202ENST00000375299 KLHL41O60662 606 aa21.7■■□□□ 1.06
UPF3A-202ENST00000375299 TOMM70O94826 608 aa21.7■■□□□ 1.06
UPF3A-202ENST00000375299 CCDC130P13994 396 aa21.7■■□□□ 1.06
UPF3A-202ENST00000375299 UBA1P22314 1058 aaKnown RBP21.7■■□□□ 1.06
UPF3A-202ENST00000375299 SDC4P31431 198 aa21.7■■□□□ 1.06
UPF3A-202ENST00000375299 INHBCP55103 352 aa21.7■■□□□ 1.06
UPF3A-202ENST00000375299 FAM160B1Q5W0V3 765 aa21.7■■□□□ 1.06
UPF3A-202ENST00000375299 KCNT2Q6UVM3 1135 aa21.7■■□□□ 1.06
UPF3A-202ENST00000375299 METTL25Q8N6Q8 603 aa21.7■■□□□ 1.06
UPF3A-202ENST00000375299 ZFRQ96KR1 1074 aaKnown RBP21.7■■□□□ 1.06
UPF3A-202ENST00000375299 TSPAN16Q9UKR8 245 aa21.7■■□□□ 1.06
UPF3A-202ENST00000375299 PRPF19Q9UMS4 504 aaKnown RBP21.7■■□□□ 1.06
UPF3A-202ENST00000375299 SCN4AP35499 1836 aa21.7■■□□□ 1.06
UPF3A-202ENST00000375299 CPA3P15088 417 aa21.69■■□□□ 1.06
UPF3A-202ENST00000375299 PTPRAP18433 802 aa21.69■■□□□ 1.06
UPF3A-202ENST00000375299 CLCN2P51788 898 aa21.69■■□□□ 1.06
UPF3A-202ENST00000375299 USP46P62068 366 aa21.69■■□□□ 1.06
UPF3A-202ENST00000375299 FSTL1Q12841 308 aa21.69■■□□□ 1.06
UPF3A-202ENST00000375299 USP4Q13107 963 aa21.69■■□□□ 1.06
UPF3A-202ENST00000375299 MXD4Q14582 209 aaPredicted RBP21.69■■□□□ 1.06
UPF3A-202ENST00000375299 NADK2Q4G0N4 442 aa21.69■■□□□ 1.06
UPF3A-202ENST00000375299 SLC9B1Q4ZJI4 515 aa21.69■■□□□ 1.06
UPF3A-202ENST00000375299 RARS2Q5T160 578 aaKnown RBP21.69■■□□□ 1.06
UPF3A-202ENST00000375299 MAP1SQ66K74 1059 aaPredicted RBP21.69■■□□□ 1.06
UPF3A-202ENST00000375299 HEATR6Q6AI08 1181 aaKnown RBP21.69■■□□□ 1.06
UPF3A-202ENST00000375299 KLHDC10Q6PID8 442 aa21.69■■□□□ 1.06
UPF3A-202ENST00000375299 TEX13BQ9BXU2 312 aa21.69■■□□□ 1.06
UPF3A-202ENST00000375299 AS3MTQ9HBK9 375 aa21.69■■□□□ 1.06
UPF3A-202ENST00000375299 PREBQ9HCU5 417 aa21.69■■□□□ 1.06
UPF3A-202ENST00000375299 MAN1C1Q9NR34 630 aa21.69■■□□□ 1.06
UPF3A-202ENST00000375299 FARP2O94887 1054 aaPredicted RBP21.69■■□□□ 1.06
UPF3A-202ENST00000375299 CRTAMO95727 393 aa21.69■■□□□ 1.06
UPF3A-202ENST00000375299 PGAM1P18669 254 aa21.69■■□□□ 1.06
UPF3A-202ENST00000375299 TYK2P29597 1187 aa21.69■■□□□ 1.06
UPF3A-202ENST00000375299 RGS7P49802 495 aa21.69■■□□□ 1.06
UPF3A-202ENST00000375299 TMEM132AQ24JP5 1023 aa21.69■■□□□ 1.06
UPF3A-202ENST00000375299 CCDC153Q494R4 210 aa21.69■■□□□ 1.06
UPF3A-202ENST00000375299 SH2D4BQ5SQS7 431 aa21.69■■□□□ 1.06
UPF3A-202ENST00000375299 LCLAT1Q6UWP7 414 aa21.69■■□□□ 1.06
UPF3A-202ENST00000375299 LRRC71Q8N4P6 559 aa21.69■■□□□ 1.06
UPF3A-202ENST00000375299 ZNF781Q8N8C0 355 aa21.69■■□□□ 1.06
UPF3A-202ENST00000375299 OXCT2Q9BYC2 517 aaPredicted RBP21.69■■□□□ 1.06
UPF3A-202ENST00000375299 LMCD1Q9NZU5 365 aa21.69■■□□□ 1.06
UPF3A-202ENST00000375299 HSFX1Q9UBD0 423 aa21.69■■□□□ 1.06
UPF3A-202ENST00000375299 ACKR2O00590 384 aa21.68■■□□□ 1.06
UPF3A-202ENST00000375299 B4GALT5O43286 388 aa21.68■■□□□ 1.06
UPF3A-202ENST00000375299 ZFXP17010 805 aaPredicted RBP21.68■■□□□ 1.06
UPF3A-202ENST00000375299 METTL21CQ5VZV1 264 aa21.68■■□□□ 1.06
UPF3A-202ENST00000375299 LRRC8BQ6P9F7 803 aa21.68■■□□□ 1.06
UPF3A-202ENST00000375299 OLFML1Q6UWY5 402 aa21.68■■□□□ 1.06
UPF3A-202ENST00000375299 TMEM126BQ8IUX1 230 aa21.68■■□□□ 1.06
UPF3A-202ENST00000375299 AHI1Q8N157 1196 aa21.68■■□□□ 1.06
UPF3A-202ENST00000375299 LRGUKQ96M69 825 aa21.68■■□□□ 1.06
UPF3A-202ENST00000375299 LENG8Q96PV6 779 aaPredicted RBP21.68■■□□□ 1.06
UPF3A-202ENST00000375299 SERPINI1Q99574 410 aa21.68■■□□□ 1.06
UPF3A-202ENST00000375299 RBM38Q9H0Z9 239 aaKnown RBP21.68■■□□□ 1.06
UPF3A-202ENST00000375299 CDT1Q9H211 546 aa21.68■■□□□ 1.06
UPF3A-202ENST00000375299 MTMR10Q9NXD2 777 aa21.68■■□□□ 1.06
UPF3A-202ENST00000375299 PACSIN3Q9UKS6 424 aa21.68■■□□□ 1.06
UPF3A-202ENST00000375299 AP4B1Q9Y6B7 739 aa21.68■■□□□ 1.06
UPF3A-202ENST00000375299 BTBD19C9JJ37 291 aa21.68■■□□□ 1.06
UPF3A-202ENST00000375299 STRNO43815 780 aa21.68■■□□□ 1.06
UPF3A-202ENST00000375299 HSPA4LO95757 839 aa21.68■■□□□ 1.06
UPF3A-202ENST00000375299 PFKMP08237 780 aa21.68■■□□□ 1.06
UPF3A-202ENST00000375299 MGAT1P26572 445 aa21.68■■□□□ 1.06
UPF3A-202ENST00000375299 GARSP41250 739 aaKnown RBP21.68■■□□□ 1.06
UPF3A-202ENST00000375299 NR2C2P49116 596 aa21.68■■□□□ 1.06
UPF3A-202ENST00000375299 ADGRE1Q14246 886 aa21.68■■□□□ 1.06
UPF3A-202ENST00000375299 CATSPER1Q8NEC5 780 aa21.68■■□□□ 1.06
UPF3A-202ENST00000375299 C12orf42Q96LP6 360 aa21.68■■□□□ 1.06
UPF3A-202ENST00000375299 ZNF696Q9H7X3 374 aa21.68■■□□□ 1.06
UPF3A-202ENST00000375299 PICK1Q9NRD5 415 aa21.68■■□□□ 1.06
UPF3A-202ENST00000375299 ZNF358Q9NW07 568 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms