RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 SYTL3Q4VX76 610 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 CMPK2Q5EBM0 449 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 TAS2R42Q7RTR8 314 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 TMCO6Q96DC7 493 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 EPB41L4AQ9HCS5 686 aaPredicted RBP10.42□□□□□ -0.74
PTCH1-204ENST00000375290 GJA3Q9Y6H8 435 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 MED24O75448 989 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 PBX1P40424 430 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 CD151P48509 253 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 TWF2Q6IBS0 349 aaKnown RBP10.42□□□□□ -0.74
PTCH1-204ENST00000375290 PTCD2Q8WV60 388 aaKnown RBP10.42□□□□□ -0.74
PTCH1-204ENST00000375290 NUDT12Q9BQG2 462 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 EPB41L4BQ9H329 900 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 DIP2BQ9P265 1576 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 CYP1A2P05177 515 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 KCNJ1P48048 391 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 CASP5P51878 434 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 TSTA3Q13630 321 aaPredicted RBP10.42□□□□□ -0.74
PTCH1-204ENST00000375290 CCDC157Q569K6 752 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 DPP10Q8N608 796 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 AGR3Q8TD06 166 aa10.42□□□□□ -0.74
PTCH1-204ENST00000375290 TSPAN9O75954 239 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 GJB6O95452 261 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 AKAP5P24588 427 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 CENPIQ92674 756 aaPredicted RBP10.41□□□□□ -0.74
PTCH1-204ENST00000375290 CLEC11AQ9Y240 323 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 DUSP10Q9Y6W6 482 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 DISP2A7MBM2 1401 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 HDAC3O15379 428 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 WBP4O75554 376 aaKnown RBP10.41□□□□□ -0.74
PTCH1-204ENST00000375290 CYBBP04839 570 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 ZNF605Q86T29 641 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 FCGR1BQ92637 280 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 EZH1Q92800 747 aaPredicted RBP10.41□□□□□ -0.74
PTCH1-204ENST00000375290 MYLPFQ96A32 169 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 TRAF2Q12933 501 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 NR1D2Q14995 579 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 FBXO33Q7Z6M2 555 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 HPDLQ96IR7 371 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 TMEM260Q9NX78 707 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 TAF4O00268 1085 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 NFKB1P19838 968 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 TAF6P49848 677 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 CYP24A1Q07973 514 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 COX10Q12887 443 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 ATF7IP2Q5U623 682 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 SENP6Q9GZR1 1112 aaPredicted RBP10.41□□□□□ -0.74
PTCH1-204ENST00000375290 POLIQ9UNA4 740 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 ALOX15BO15296 676 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 METTL3Q86U44 580 aaKnown RBP10.41□□□□□ -0.74
PTCH1-204ENST00000375290 PQLC1Q8N2U9 271 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 SNIP1Q8TAD8 396 aaKnown RBP10.41□□□□□ -0.74
PTCH1-204ENST00000375290 ZBED2Q9BTP6 218 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 DDX43Q9NXZ2 648 aaKnown RBP10.41□□□□□ -0.74
PTCH1-204ENST00000375290 MYL12BO14950 172 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 TCN1P20061 433 aaPredicted RBP10.41□□□□□ -0.74
PTCH1-204ENST00000375290 BGNP21810 368 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 DNAJB1P25685 340 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 GMFBP60983 142 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 UBXN2AP68543 259 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 ARHGAP17Q68EM7 881 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 SNRNP27Q8WVK2 155 aaKnown RBP10.41□□□□□ -0.74
PTCH1-204ENST00000375290 ATP6V1B2P21281 511 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 RTP1P59025 263 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 SCAIQ8N9R8 606 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 SPATA33Q96N06 139 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 MRPL57Q9BQC6 102 aaKnown RBP10.41□□□□□ -0.74
PTCH1-204ENST00000375290 ZNF670Q9BS34 389 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 JCADQ9P266 1359 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 IDH3BO43837 385 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 VAV1P15498 845 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 RASA1P20936 1047 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 SLC26A3P40879 764 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 SNAP25P60880 206 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 CDC42P60953 191 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 TUBA3EQ6PEY2 450 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 ATP6V0D2Q8N8Y2 350 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 PHC3Q8NDX5 983 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 SLCO2A1Q92959 643 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 TAS2R13Q9NYV9 303 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 TRPM5Q9NZQ8 1165 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 PRMT5O14744 637 aaPredicted RBP10.41□□□□□ -0.74
PTCH1-204ENST00000375290 CAPGP40121 348 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 PKN1Q16512 942 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 ALLCQ8N6M5 410 aa10.41□□□□□ -0.74
PTCH1-204ENST00000375290 INPP4AQ96PE3 977 aaPredicted RBP10.41□□□□□ -0.74
PTCH1-204ENST00000375290 DDX18Q9NVP1 670 aaKnown RBP10.41□□□□□ -0.74
PTCH1-204ENST00000375290 OVGP1Q12889 678 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 ANGEL2Q5VTE6 544 aaKnown RBP10.4□□□□□ -0.74
PTCH1-204ENST00000375290 PTRHD1Q6GMV3 140 aaKnown RBP10.4□□□□□ -0.74
PTCH1-204ENST00000375290 CCDC81Q6ZN84 652 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 SPATA5L1Q9BVQ7 753 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 KCNH7Q9NS40 1196 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 DNAJC28Q9NX36 388 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 GIN1Q9NXP7 522 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 IFT80Q9P2H3 777 aaPredicted RBP10.4□□□□□ -0.74
PTCH1-204ENST00000375290 FGF10O15520 208 aaPredicted RBP10.4□□□□□ -0.74
PTCH1-204ENST00000375290 UGT2B11O75310 529 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 CYP3A4P08684 503 aa10.4□□□□□ -0.74
PTCH1-204ENST00000375290 PRKAR1AP10644 381 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms