RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 SMARCB1Q12824 385 aa11.39□□□□□ -0.59
HLA-DQA1-202ENST00000374949 USP4Q13107 963 aa11.39□□□□□ -0.59
HLA-DQA1-202ENST00000374949 ZNF77Q15935 545 aa11.39□□□□□ -0.59
HLA-DQA1-202ENST00000374949 NFE2Q16621 373 aaPredicted RBP11.39□□□□□ -0.59
HLA-DQA1-202ENST00000374949 DDR2Q16832 855 aa11.39□□□□□ -0.59
HLA-DQA1-202ENST00000374949 WHAMMP3Q1A5X7 153 aa11.39□□□□□ -0.59
HLA-DQA1-202ENST00000374949 CLEC20AQ6ZU45 233 aa11.39□□□□□ -0.59
HLA-DQA1-202ENST00000374949 FAM35AQ86V20 835 aa11.39□□□□□ -0.59
HLA-DQA1-202ENST00000374949 PIGZQ86VD9 579 aa11.39□□□□□ -0.59
HLA-DQA1-202ENST00000374949 SCUBE3Q8IX30 993 aa11.39□□□□□ -0.59
HLA-DQA1-202ENST00000374949 MYLPFQ96A32 169 aa11.39□□□□□ -0.59
HLA-DQA1-202ENST00000374949 HES6Q96HZ4 224 aa11.39□□□□□ -0.59
HLA-DQA1-202ENST00000374949 PBKQ96KB5 322 aa11.39□□□□□ -0.59
HLA-DQA1-202ENST00000374949 MCEEQ96PE7 176 aa11.39□□□□□ -0.59
HLA-DQA1-202ENST00000374949 SLC22A12Q96S37 553 aa11.39□□□□□ -0.59
HLA-DQA1-202ENST00000374949 OSBPL9Q96SU4 736 aa11.39□□□□□ -0.59
HLA-DQA1-202ENST00000374949 SMOQ99835 787 aa11.39□□□□□ -0.59
HLA-DQA1-202ENST00000374949 TPSD1Q9BZJ3 242 aa11.39□□□□□ -0.59
HLA-DQA1-202ENST00000374949 GOLPH3Q9H4A6 298 aa11.39□□□□□ -0.59
HLA-DQA1-202ENST00000374949 ECT2Q9H8V3 914 aa11.39□□□□□ -0.59
HLA-DQA1-202ENST00000374949 LRRC4Q9HBW1 653 aa11.39□□□□□ -0.59
HLA-DQA1-202ENST00000374949 CSNK1G1Q9HCP0 422 aa11.39□□□□□ -0.59
HLA-DQA1-202ENST00000374949 KRT82Q9NSB4 513 aa11.39□□□□□ -0.59
HLA-DQA1-202ENST00000374949 DUS2Q9NX74 493 aaKnown RBP11.39□□□□□ -0.59
HLA-DQA1-202ENST00000374949 PACSIN2Q9UNF0 486 aaPredicted RBP11.39□□□□□ -0.59
HLA-DQA1-202ENST00000374949 INVSQ9Y283 1065 aa11.39□□□□□ -0.59
HLA-DQA1-202ENST00000374949 MRFAP1Q9Y605 127 aa11.39□□□□□ -0.59
HLA-DQA1-202ENST00000374949 PKD1L2Q7Z442 2459 aa11.38□□□□□ -0.59
HLA-DQA1-202ENST00000374949 BCLAF3A2AJT9 711 aaKnown RBP11.38□□□□□ -0.59
HLA-DQA1-202ENST00000374949 CES2O00748 559 aa11.38□□□□□ -0.59
HLA-DQA1-202ENST00000374949 PAPSS1O43252 624 aaPredicted RBP11.38□□□□□ -0.59
HLA-DQA1-202ENST00000374949 SPOPO43791 374 aa11.38□□□□□ -0.59
HLA-DQA1-202ENST00000374949 SRGAP2O75044 1071 aa11.38□□□□□ -0.59
HLA-DQA1-202ENST00000374949 GABBR2O75899 941 aa11.38□□□□□ -0.59
HLA-DQA1-202ENST00000374949 BEST1O76090 585 aa11.38□□□□□ -0.59
HLA-DQA1-202ENST00000374949 RHOBTB1O94844 696 aa11.38□□□□□ -0.59
HLA-DQA1-202ENST00000374949 CKMP06732 381 aa11.38□□□□□ -0.59
HLA-DQA1-202ENST00000374949 PROS1P07225 676 aa11.38□□□□□ -0.59
HLA-DQA1-202ENST00000374949 CSH1P0DML2 217 aa11.38□□□□□ -0.59
HLA-DQA1-202ENST00000374949 CSH2P0DML3 217 aa11.38□□□□□ -0.59
HLA-DQA1-202ENST00000374949 SPINK2P20155 84 aa11.38□□□□□ -0.59
HLA-DQA1-202ENST00000374949 BDNFP23560 247 aa11.38□□□□□ -0.59
HLA-DQA1-202ENST00000374949 CYP2F1P24903 491 aa11.38□□□□□ -0.59
HLA-DQA1-202ENST00000374949 MAN1A1P33908 653 aa11.38□□□□□ -0.59
HLA-DQA1-202ENST00000374949 RFC1P35251 1148 aaPredicted RBP11.38□□□□□ -0.59
HLA-DQA1-202ENST00000374949 SCNN1AP37088 669 aa11.38□□□□□ -0.59
HLA-DQA1-202ENST00000374949 IFNAR2P48551 515 aa11.38□□□□□ -0.59
HLA-DQA1-202ENST00000374949 DGKEP52429 567 aa11.38□□□□□ -0.59
HLA-DQA1-202ENST00000374949 FOXC1Q12948 553 aa11.38□□□□□ -0.59
HLA-DQA1-202ENST00000374949 PIGHQ14442 188 aaPredicted RBP11.38□□□□□ -0.59
HLA-DQA1-202ENST00000374949 FBXO43Q4G163 708 aa11.38□□□□□ -0.59
HLA-DQA1-202ENST00000374949 EFHC1Q5JVL4 640 aa11.38□□□□□ -0.59
HLA-DQA1-202ENST00000374949 FAM102AQ5T9C2 384 aaPredicted RBP11.38□□□□□ -0.59
HLA-DQA1-202ENST00000374949 UNQ6494/PRO21346Q6UXR6 183 aa11.38□□□□□ -0.59
HLA-DQA1-202ENST00000374949 FAM183BPQ6ZVS7 135 aa11.38□□□□□ -0.59
HLA-DQA1-202ENST00000374949 SYT13Q7L8C5 426 aa11.38□□□□□ -0.59
HLA-DQA1-202ENST00000374949 UBL4BQ8N7F7 174 aa11.38□□□□□ -0.59
HLA-DQA1-202ENST00000374949 CEP112Q8N8E3 955 aa11.38□□□□□ -0.59
HLA-DQA1-202ENST00000374949 TSTD1Q8NFU3 115 aa11.38□□□□□ -0.59
HLA-DQA1-202ENST00000374949 CD101Q93033 1021 aa11.38□□□□□ -0.59
HLA-DQA1-202ENST00000374949 ACDQ96AP0 544 aa11.38□□□□□ -0.59
HLA-DQA1-202ENST00000374949 CYP2S1Q96SQ9 504 aa11.38□□□□□ -0.59
HLA-DQA1-202ENST00000374949 TRIM7Q9C029 511 aa11.38□□□□□ -0.59
HLA-DQA1-202ENST00000374949 METTL5Q9NRN9 209 aaKnown RBP11.38□□□□□ -0.59
HLA-DQA1-202ENST00000374949 RNF14Q9UBS8 474 aa11.38□□□□□ -0.59
HLA-DQA1-202ENST00000374949 TMEM59LQ9UK28 342 aa11.38□□□□□ -0.59
HLA-DQA1-202ENST00000374949 PTPRDP23468 1912 aa11.38□□□□□ -0.59
HLA-DQA1-202ENST00000374949 TNRC6BQ9UPQ9 1833 aaKnown RBP11.37□□□□□ -0.59
HLA-DQA1-202ENST00000374949 TRAV19A0A0A6YYK7 116 aa11.37□□□□□ -0.59
HLA-DQA1-202ENST00000374949 CCDC66A2RUB6 948 aa11.37□□□□□ -0.59
HLA-DQA1-202ENST00000374949 ANTXRLA6NF34 631 aa11.37□□□□□ -0.59
HLA-DQA1-202ENST00000374949 PATE3B3GLJ2 98 aa11.37□□□□□ -0.59
HLA-DQA1-202ENST00000374949 KCNK3O14649 394 aa11.37□□□□□ -0.59
HLA-DQA1-202ENST00000374949 DDX3YO15523 660 aaKnown RBP11.37□□□□□ -0.59
HLA-DQA1-202ENST00000374949 FBXO21O94952 628 aa11.37□□□□□ -0.59
HLA-DQA1-202ENST00000374949 SLU7O95391 586 aaKnown RBP11.37□□□□□ -0.59
HLA-DQA1-202ENST00000374949 BCKDHBP21953 392 aa11.37□□□□□ -0.59
HLA-DQA1-202ENST00000374949 CTNNA2P26232 953 aa11.37□□□□□ -0.59
HLA-DQA1-202ENST00000374949 CXCR5P32302 372 aa11.37□□□□□ -0.59
HLA-DQA1-202ENST00000374949 GRIK1P39086 918 aa11.37□□□□□ -0.59
HLA-DQA1-202ENST00000374949 PAFAH1B1P43034 410 aa11.37□□□□□ -0.59
HLA-DQA1-202ENST00000374949 SEC13P55735 322 aa11.37□□□□□ -0.59
HLA-DQA1-202ENST00000374949 RNASE9P60153 205 aaKnown RBP11.37□□□□□ -0.59
HLA-DQA1-202ENST00000374949 ACAP1Q15027 740 aa11.37□□□□□ -0.59
HLA-DQA1-202ENST00000374949 EML3Q32P44 896 aa11.37□□□□□ -0.59
HLA-DQA1-202ENST00000374949 PMS2CLQ68D20 193 aa11.37□□□□□ -0.59
HLA-DQA1-202ENST00000374949 ANO7Q6IWH7 933 aa11.37□□□□□ -0.59
HLA-DQA1-202ENST00000374949 OLFML1Q6UWY5 402 aa11.37□□□□□ -0.59
HLA-DQA1-202ENST00000374949 SIX6OS1Q8N1H7 587 aa11.37□□□□□ -0.59
HLA-DQA1-202ENST00000374949 ARL14EPQ8N8R7 260 aaPredicted RBP11.37□□□□□ -0.59
HLA-DQA1-202ENST00000374949 JOSD2Q8TAC2 188 aa11.37□□□□□ -0.59
HLA-DQA1-202ENST00000374949 FNIP1Q8TF40 1166 aa11.37□□□□□ -0.59
HLA-DQA1-202ENST00000374949 OSCP1Q8WVF1 389 aa11.37□□□□□ -0.59
HLA-DQA1-202ENST00000374949 ATP2A3Q93084 1043 aa11.37□□□□□ -0.59
HLA-DQA1-202ENST00000374949 FUBP3Q96I24 572 aaKnown RBP eCLIP11.37□□□□□ -0.59
HLA-DQA1-202ENST00000374949 KCNK16Q96T55 309 aa11.37□□□□□ -0.59
HLA-DQA1-202ENST00000374949 DMAP1Q9NPF5 467 aaPredicted RBP11.37□□□□□ -0.59
HLA-DQA1-202ENST00000374949 ASNSD1Q9NWL6 643 aa11.37□□□□□ -0.59
HLA-DQA1-202ENST00000374949 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.37□□□□□ -0.59
HLA-DQA1-202ENST00000374949 PCDHA3Q9Y5H8 950 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms