RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 ARMC2Q8NEN0 867 aa14.35□□□□□ -0.11
HMGCL-203ENST00000374490 KCTD13Q8WZ19 329 aa14.35□□□□□ -0.11
HMGCL-203ENST00000374490 NUDCD1Q96RS6 583 aa14.35□□□□□ -0.11
HMGCL-203ENST00000374490 FAM49AQ9H0Q0 323 aaPredicted RBP14.35□□□□□ -0.11
HMGCL-203ENST00000374490 STN1Q9H668 368 aaKnown RBP14.35□□□□□ -0.11
HMGCL-203ENST00000374490 SPC25Q9HBM1 224 aa14.35□□□□□ -0.11
HMGCL-203ENST00000374490 ARL8BQ9NVJ2 186 aa14.35□□□□□ -0.11
HMGCL-203ENST00000374490 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.35□□□□□ -0.11
HMGCL-203ENST00000374490 SORCS3Q9UPU3 1222 aa14.35□□□□□ -0.11
HMGCL-203ENST00000374490 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.35□□□□□ -0.11
HMGCL-203ENST00000374490 TRIOBPQ9H2D6 2365 aa14.35□□□□□ -0.11
HMGCL-203ENST00000374490 SMIM28A0A1B0GU29 152 aa14.34□□□□□ -0.11
HMGCL-203ENST00000374490 LIN7AO14910 233 aaPredicted RBP14.34□□□□□ -0.11
HMGCL-203ENST00000374490 DUSP11O75319 330 aaKnown RBP14.34□□□□□ -0.11
HMGCL-203ENST00000374490 CYP2C9P11712 490 aa14.34□□□□□ -0.11
HMGCL-203ENST00000374490 CYBAP13498 195 aa14.34□□□□□ -0.11
HMGCL-203ENST00000374490 GNAZP19086 355 aa14.34□□□□□ -0.11
HMGCL-203ENST00000374490 AMPD1P23109 780 aa14.34□□□□□ -0.11
HMGCL-203ENST00000374490 NOS2P35228 1153 aa14.34□□□□□ -0.11
HMGCL-203ENST00000374490 MRPS5P82675 430 aaKnown RBP14.34□□□□□ -0.11
HMGCL-203ENST00000374490 BST1Q10588 318 aa14.34□□□□□ -0.11
HMGCL-203ENST00000374490 CHI3L2Q15782 390 aa14.34□□□□□ -0.11
HMGCL-203ENST00000374490 TEX44Q53QW1 395 aa14.34□□□□□ -0.11
HMGCL-203ENST00000374490 DENND5BQ6ZUT9 1274 aa14.34□□□□□ -0.11
HMGCL-203ENST00000374490 C7orf61Q8IZ16 206 aa14.34□□□□□ -0.11
HMGCL-203ENST00000374490 ADGRF2Q8IZF7 708 aa14.34□□□□□ -0.11
HMGCL-203ENST00000374490 NDUFAF2Q8N183 169 aa14.34□□□□□ -0.11
HMGCL-203ENST00000374490 CCDC185Q8N715 623 aa14.34□□□□□ -0.11
HMGCL-203ENST00000374490 GPATCH11Q8N954 259 aa14.34□□□□□ -0.11
HMGCL-203ENST00000374490 STKLD1Q8NE28 680 aa14.34□□□□□ -0.11
HMGCL-203ENST00000374490 SLC2A14Q8TDB8 520 aa14.34□□□□□ -0.11
HMGCL-203ENST00000374490 CLEC4CQ8WTT0 213 aa14.34□□□□□ -0.11
HMGCL-203ENST00000374490 TRIB2Q92519 343 aa14.34□□□□□ -0.11
HMGCL-203ENST00000374490 ATP2A3Q93084 1043 aa14.34□□□□□ -0.11
HMGCL-203ENST00000374490 OSMRQ99650 979 aa14.34□□□□□ -0.11
HMGCL-203ENST00000374490 DUSP16Q9BY84 665 aa14.34□□□□□ -0.11
HMGCL-203ENST00000374490 NXF3Q9H4D5 531 aaKnown RBP14.34□□□□□ -0.11
HMGCL-203ENST00000374490 C11orf49Q9H6J7 331 aa14.34□□□□□ -0.11
HMGCL-203ENST00000374490 ARHGEF4Q9NR80 690 aa14.34□□□□□ -0.11
HMGCL-203ENST00000374490 PCMTD2Q9NV79 361 aa14.34□□□□□ -0.11
HMGCL-203ENST00000374490 KPNA6O60684 536 aa14.33□□□□□ -0.11
HMGCL-203ENST00000374490 SNNO75324 88 aaPredicted RBP14.33□□□□□ -0.11
HMGCL-203ENST00000374490 FBXO21O94952 628 aa14.33□□□□□ -0.11
HMGCL-203ENST00000374490 MAP3K6O95382 1288 aa14.33□□□□□ -0.11
HMGCL-203ENST00000374490 RPSAP08865 295 aaKnown RBP14.33□□□□□ -0.11
HMGCL-203ENST00000374490 PDGFRBP09619 1106 aa14.33□□□□□ -0.11
HMGCL-203ENST00000374490 C6orf222P0C671 652 aaPredicted RBP14.33□□□□□ -0.11
HMGCL-203ENST00000374490 TPBGLP0DKB5 382 aa14.33□□□□□ -0.11
HMGCL-203ENST00000374490 VAV1P15498 845 aa14.33□□□□□ -0.11
HMGCL-203ENST00000374490 GARSP41250 739 aaKnown RBP14.33□□□□□ -0.11
HMGCL-203ENST00000374490 ZNF135P52742 658 aaPredicted RBP14.33□□□□□ -0.11
HMGCL-203ENST00000374490 NIPAL4Q0D2K0 466 aa14.33□□□□□ -0.11
HMGCL-203ENST00000374490 WASHC5Q12768 1159 aa14.33□□□□□ -0.11
HMGCL-203ENST00000374490 TRIM32Q13049 653 aa14.33□□□□□ -0.11
HMGCL-203ENST00000374490 STX3Q13277 289 aa14.33□□□□□ -0.11
HMGCL-203ENST00000374490 BMPR2Q13873 1038 aa14.33□□□□□ -0.11
HMGCL-203ENST00000374490 PAFAH1B3Q15102 231 aaKnown RBP14.33□□□□□ -0.11
HMGCL-203ENST00000374490 ZRSR2Q15696 482 aaKnown RBP14.33□□□□□ -0.11
HMGCL-203ENST00000374490 INSCQ1MX18 579 aa14.33□□□□□ -0.11
HMGCL-203ENST00000374490 GLRA4Q5JXX5 417 aa14.33□□□□□ -0.11
HMGCL-203ENST00000374490 C4orf50Q6ZRC1 276 aa14.33□□□□□ -0.11
HMGCL-203ENST00000374490 BNIPLQ7Z465 357 aa14.33□□□□□ -0.11
HMGCL-203ENST00000374490 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.33□□□□□ -0.11
HMGCL-203ENST00000374490 DEFB106AQ8N104 65 aa14.33□□□□□ -0.11
HMGCL-203ENST00000374490 COLGALT1Q8NBJ5 622 aa14.33□□□□□ -0.11
HMGCL-203ENST00000374490 NT5C3BQ969T7 300 aa14.33□□□□□ -0.11
HMGCL-203ENST00000374490 MCUR1Q96AQ8 359 aa14.33□□□□□ -0.11
HMGCL-203ENST00000374490 SLC9A7Q96T83 725 aa14.33□□□□□ -0.11
HMGCL-203ENST00000374490 CADM1Q9BY67 442 aaKnown RBP14.33□□□□□ -0.11
HMGCL-203ENST00000374490 DENND2DQ9H6A0 471 aaPredicted RBP14.33□□□□□ -0.11
HMGCL-203ENST00000374490 THAP1Q9NVV9 213 aa14.33□□□□□ -0.11
HMGCL-203ENST00000374490 IGSF9Q9P2J2 1179 aa14.33□□□□□ -0.11
HMGCL-203ENST00000374490 GINS2Q9Y248 185 aa14.33□□□□□ -0.11
HMGCL-203ENST00000374490 HAS3O00219 553 aa14.33□□□□□ -0.12
HMGCL-203ENST00000374490 RNF103O00237 685 aa14.33□□□□□ -0.12
HMGCL-203ENST00000374490 GSC2O15499 205 aa14.33□□□□□ -0.12
HMGCL-203ENST00000374490 GNAT1P11488 350 aa14.33□□□□□ -0.12
HMGCL-203ENST00000374490 PRKAR2AP13861 404 aaKnown RBP14.33□□□□□ -0.12
HMGCL-203ENST00000374490 GOT1P17174 413 aa14.33□□□□□ -0.12
HMGCL-203ENST00000374490 LRPAP1P30533 357 aa14.33□□□□□ -0.12
HMGCL-203ENST00000374490 GCKP35557 465 aa14.33□□□□□ -0.12
HMGCL-203ENST00000374490 FRG1Q14331 258 aaKnown RBP14.33□□□□□ -0.12
HMGCL-203ENST00000374490 TSNAXIP1Q2TAA8 658 aa14.33□□□□□ -0.12
HMGCL-203ENST00000374490 TRMT10BQ6PF06 316 aaKnown RBP14.33□□□□□ -0.12
HMGCL-203ENST00000374490 PACS1Q6VY07 963 aa14.33□□□□□ -0.12
HMGCL-203ENST00000374490 PIGZQ86VD9 579 aa14.33□□□□□ -0.12
HMGCL-203ENST00000374490 MPP5Q8N3R9 675 aa14.33□□□□□ -0.12
HMGCL-203ENST00000374490 TEX9Q8N6V9 391 aa14.33□□□□□ -0.12
HMGCL-203ENST00000374490 B3GALNT2Q8NCR0 500 aa14.33□□□□□ -0.12
HMGCL-203ENST00000374490 TRPV1Q8NER1 839 aa14.33□□□□□ -0.12
HMGCL-203ENST00000374490 RNF139Q8WU17 664 aa14.33□□□□□ -0.12
HMGCL-203ENST00000374490 FAM149B1Q96BN6 582 aa14.33□□□□□ -0.12
HMGCL-203ENST00000374490 SLC2A13Q96QE2 648 aa14.33□□□□□ -0.12
HMGCL-203ENST00000374490 NPY6RQ99463 290 aa14.33□□□□□ -0.12
HMGCL-203ENST00000374490 MIPEPQ99797 713 aa14.33□□□□□ -0.12
HMGCL-203ENST00000374490 APOL6Q9BWW8 343 aa14.33□□□□□ -0.12
HMGCL-203ENST00000374490 SLC13A1Q9BZW2 595 aa14.33□□□□□ -0.12
HMGCL-203ENST00000374490 BRD8Q9H0E9 1235 aa14.33□□□□□ -0.12
HMGCL-203ENST00000374490 CXCL16Q9H2A7 254 aa14.33□□□□□ -0.12
HMGCL-203ENST00000374490 STOML1Q9UBI4 398 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms