RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 DCDC5Q6ZRR9 648 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 SLC47A2Q86VL8 602 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 HERC6Q8IVU3 1022 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 DHX38Q92620 1227 aaKnown RBP10.48□□□□□ -0.73
CD28-202ENST00000374481 CENPOQ9BU64 300 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 TMEM245Q9H330 911 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 TOR3AQ9H497 397 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 STOML2Q9UJZ1 356 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 E7ENX8 843 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 PRR23D1E9PI22 279 aaPredicted RBP10.48□□□□□ -0.73
CD28-202ENST00000374481 SLC37A4O43826 429 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 PRR23D2P0DMB1 279 aaPredicted RBP10.48□□□□□ -0.73
CD28-202ENST00000374481 PEX6Q13608 980 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 TTC23Q5W5X9 447 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 TWF2Q6IBS0 349 aaKnown RBP10.48□□□□□ -0.73
CD28-202ENST00000374481 KCTD4Q8WVF5 259 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 COG4Q9H9E3 785 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 NEK6Q9HC98 313 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 SSU72Q9NP77 194 aaKnown RBP10.48□□□□□ -0.73
CD28-202ENST00000374481 HPS4Q9NQG7 708 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 CCDC167Q9P0B6 97 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 MYPNQ86TC9 1320 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 A0A1W2PRG6 482 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 H0YC42 278 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 UBDO15205 165 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 EIF3DO15371 548 aaKnown RBP eCLIP10.48□□□□□ -0.73
CD28-202ENST00000374481 SLC16A4O15374 487 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 ZNF182P17025 639 aaPredicted RBP10.48□□□□□ -0.73
CD28-202ENST00000374481 C4BPBP20851 252 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 PIK3R1P27986 724 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 PRKAA1Q13131 559 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 SLC22A16Q86VW1 577 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 CHSY1Q86X52 802 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 ARMC8Q8IUR7 673 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 GOLM1Q8NBJ4 401 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 SLC44A5Q8NCS7 719 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 C19orf18Q8NEA5 215 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 FAR1Q8WVX9 515 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 PNMA5Q96PV4 448 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 EIF2AK1Q9BQI3 630 aaKnown RBP10.48□□□□□ -0.73
CD28-202ENST00000374481 RUSC1Q9BVN2 902 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 RUBCNLQ9H714 662 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 WDR6Q9NNW5 1121 aaKnown RBP10.48□□□□□ -0.73
CD28-202ENST00000374481 AGPAT3Q9NRZ7 376 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 SRP68Q9UHB9 627 aaKnown RBP10.48□□□□□ -0.73
CD28-202ENST00000374481 IPO11Q9UI26 975 aaKnown RBP10.48□□□□□ -0.73
CD28-202ENST00000374481 RNF103O00237 685 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 APOL1O14791 398 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 TBX1O43435 398 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 CLPXO76031 633 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 VAPBO95292 243 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 T-ENOLP0DO92 83 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 ITGAXP20702 1163 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 CLK3P49761 638 aaKnown RBP10.48□□□□□ -0.73
CD28-202ENST00000374481 ILF2Q12905 390 aaKnown RBP10.48□□□□□ -0.73
CD28-202ENST00000374481 COG2Q14746 738 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 PDZK1Q5T2W1 519 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 SLFN13Q68D06 897 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 PLEKHM3Q6ZWE6 761 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 PARP8Q8N3A8 854 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 RNF145Q96MT1 663 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 FAM213AQ9BRX8 229 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 TRMT13Q9NUP7 481 aaKnown RBP10.48□□□□□ -0.73
CD28-202ENST00000374481 DDX43Q9NXZ2 648 aaKnown RBP10.48□□□□□ -0.73
CD28-202ENST00000374481 SLC39A10Q9ULF5 831 aa10.48□□□□□ -0.73
CD28-202ENST00000374481 LRRIQ4A6NIV6 560 aa10.47□□□□□ -0.73
CD28-202ENST00000374481 HSMCR30P0CW71 290 aa10.47□□□□□ -0.73
CD28-202ENST00000374481 ENDOUP21128 410 aaKnown RBP10.47□□□□□ -0.73
CD28-202ENST00000374481 KCNK10P57789 538 aa10.47□□□□□ -0.73
CD28-202ENST00000374481 FASTKQ14296 549 aaKnown RBP10.47□□□□□ -0.73
CD28-202ENST00000374481 NECAB2Q7Z6G3 386 aa10.47□□□□□ -0.73
CD28-202ENST00000374481 C12orf56Q8IXR9 622 aa10.47□□□□□ -0.73
CD28-202ENST00000374481 ANKRD13AQ8IZ07 590 aa10.47□□□□□ -0.73
CD28-202ENST00000374481 APPL2Q8NEU8 664 aa10.47□□□□□ -0.73
CD28-202ENST00000374481 ZNF696Q9H7X3 374 aa10.47□□□□□ -0.73
CD28-202ENST00000374481 SACM1LQ9NTJ5 587 aa10.47□□□□□ -0.73
CD28-202ENST00000374481 AP4E1Q9UPM8 1137 aa10.47□□□□□ -0.73
CD28-202ENST00000374481 PCDHGA10Q9Y5H3 936 aa10.47□□□□□ -0.73
CD28-202ENST00000374481 DIP2CQ9Y2E4 1556 aa10.47□□□□□ -0.73
CD28-202ENST00000374481 MAP2P11137 1827 aaKnown RBP10.47□□□□□ -0.73
CD28-202ENST00000374481 AVILO75366 819 aa10.47□□□□□ -0.73
CD28-202ENST00000374481 POLBP06746 335 aa10.47□□□□□ -0.73
CD28-202ENST00000374481 SLC18A1P54219 525 aa10.47□□□□□ -0.73
CD28-202ENST00000374481 AP3B2Q13367 1082 aa10.47□□□□□ -0.73
CD28-202ENST00000374481 FOXB2Q5VYV0 432 aa10.47□□□□□ -0.73
CD28-202ENST00000374481 MFSD7Q6UXD7 560 aa10.47□□□□□ -0.73
CD28-202ENST00000374481 PALB2Q86YC2 1186 aa10.47□□□□□ -0.73
CD28-202ENST00000374481 MMAAQ8IVH4 418 aaKnown RBP10.47□□□□□ -0.73
CD28-202ENST00000374481 GALNT12Q8IXK2 581 aa10.47□□□□□ -0.73
CD28-202ENST00000374481 DSELQ8IZU8 1212 aa10.47□□□□□ -0.73
CD28-202ENST00000374481 ACTRT2Q8TDY3 377 aa10.47□□□□□ -0.73
CD28-202ENST00000374481 ELMO1Q92556 727 aa10.47□□□□□ -0.73
CD28-202ENST00000374481 RHOBTB2Q9BYZ6 727 aa10.47□□□□□ -0.73
CD28-202ENST00000374481 SP140LQ9H930 580 aa10.47□□□□□ -0.73
CD28-202ENST00000374481 RSAD1Q9HA92 442 aa10.47□□□□□ -0.73
CD28-202ENST00000374481 LOC100506127A0A0U1RQW1 187 aa10.47□□□□□ -0.73
CD28-202ENST00000374481 TBXAS1P24557 533 aaPredicted RBP10.47□□□□□ -0.73
CD28-202ENST00000374481 GPD2P43304 727 aa10.47□□□□□ -0.73
CD28-202ENST00000374481 ABATP80404 500 aa10.47□□□□□ -0.73
CD28-202ENST00000374481 TRAP1Q12931 704 aaKnown RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms