RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 LRRC3Q9BY71 257 aa16.19■□□□□ 0.18
NIPAL3-204ENST00000374399 FAM129AQ9BZQ8 928 aa16.19■□□□□ 0.18
NIPAL3-204ENST00000374399 MTIF3Q9H2K0 278 aaKnown RBP16.19■□□□□ 0.18
NIPAL3-204ENST00000374399 EPB41L4BQ9H329 900 aa16.19■□□□□ 0.18
NIPAL3-204ENST00000374399 VIPAS39Q9H9C1 493 aa16.19■□□□□ 0.18
NIPAL3-204ENST00000374399 FARP1Q9Y4F1 1045 aaPredicted RBP16.19■□□□□ 0.18
NIPAL3-204ENST00000374399 CDH23Q9H251 3354 aa16.19■□□□□ 0.18
NIPAL3-204ENST00000374399 SLC12A8A0AV02 714 aa16.19■□□□□ 0.18
NIPAL3-204ENST00000374399 GRM6O15303 877 aa16.19■□□□□ 0.18
NIPAL3-204ENST00000374399 COCHO43405 550 aa16.19■□□□□ 0.18
NIPAL3-204ENST00000374399 F11P03951 625 aa16.19■□□□□ 0.18
NIPAL3-204ENST00000374399 SRGAP2BP0DMP2 458 aa16.19■□□□□ 0.18
NIPAL3-204ENST00000374399 EPHB2P29323 1055 aa16.19■□□□□ 0.18
NIPAL3-204ENST00000374399 IRAK1P51617 712 aa16.19■□□□□ 0.18
NIPAL3-204ENST00000374399 KCNQ1P51787 676 aa16.19■□□□□ 0.18
NIPAL3-204ENST00000374399 RING1Q06587 406 aa16.19■□□□□ 0.18
NIPAL3-204ENST00000374399 PRKD1Q15139 912 aaPredicted RBP16.19■□□□□ 0.18
NIPAL3-204ENST00000374399 RNASEH2BQ5TBB1 312 aaKnown RBP16.19■□□□□ 0.18
NIPAL3-204ENST00000374399 KLHDC10Q6PID8 442 aa16.19■□□□□ 0.18
NIPAL3-204ENST00000374399 CCHCR1Q8TD31 782 aa16.19■□□□□ 0.18
NIPAL3-204ENST00000374399 LGMNQ99538 433 aa16.19■□□□□ 0.18
NIPAL3-204ENST00000374399 PRMT1Q99873 361 aaKnown RBP16.19■□□□□ 0.18
NIPAL3-204ENST00000374399 RNF38Q9H0F5 515 aa16.19■□□□□ 0.18
NIPAL3-204ENST00000374399 TMEM51Q9NW97 253 aa16.19■□□□□ 0.18
NIPAL3-204ENST00000374399 C2orf78A6NCI8 922 aa16.18■□□□□ 0.18
NIPAL3-204ENST00000374399 AGPSO00116 658 aa16.18■□□□□ 0.18
NIPAL3-204ENST00000374399 KCNN4O15554 427 aa16.18■□□□□ 0.18
NIPAL3-204ENST00000374399 CSPG5O95196 566 aa16.18■□□□□ 0.18
NIPAL3-204ENST00000374399 OAS1P00973 400 aaKnown RBP16.18■□□□□ 0.18
NIPAL3-204ENST00000374399 CA3P07451 260 aa16.18■□□□□ 0.18
NIPAL3-204ENST00000374399 SLC2A3P11169 496 aa16.18■□□□□ 0.18
NIPAL3-204ENST00000374399 CA8P35219 290 aa16.18■□□□□ 0.18
NIPAL3-204ENST00000374399 DHX9Q08211 1270 aaKnown RBP16.18■□□□□ 0.18
NIPAL3-204ENST00000374399 CALCOCO2Q13137 446 aa16.18■□□□□ 0.18
NIPAL3-204ENST00000374399 MS4A13Q5J8X5 152 aa16.18■□□□□ 0.18
NIPAL3-204ENST00000374399 PLPP4Q5VZY2 271 aa16.18■□□□□ 0.18
NIPAL3-204ENST00000374399 MTERF4Q7Z6M4 381 aaKnown RBP16.18■□□□□ 0.18
NIPAL3-204ENST00000374399 IQCKQ8N0W5 287 aa16.18■□□□□ 0.18
NIPAL3-204ENST00000374399 PRDM12Q9H4Q4 367 aa16.18■□□□□ 0.18
NIPAL3-204ENST00000374399 ENTPD7Q9NQZ7 604 aa16.18■□□□□ 0.18
NIPAL3-204ENST00000374399 TLR9Q9NR96 1032 aa16.18■□□□□ 0.18
NIPAL3-204ENST00000374399 ANAPC5Q9UJX4 755 aa16.18■□□□□ 0.18
NIPAL3-204ENST00000374399 YBX2Q9Y2T7 364 aaKnown RBP16.18■□□□□ 0.18
NIPAL3-204ENST00000374399 RWDD3Q9Y3V2 267 aa16.18■□□□□ 0.18
NIPAL3-204ENST00000374399 NYNRINQ9P2P1 1898 aaKnown RBP16.17■□□□□ 0.18
NIPAL3-204ENST00000374399 E9PAM4 449 aa16.17■□□□□ 0.18
NIPAL3-204ENST00000374399 ADH1AP07327 375 aa16.17■□□□□ 0.18
NIPAL3-204ENST00000374399 HMBSP08397 361 aa16.17■□□□□ 0.18
NIPAL3-204ENST00000374399 HSD17B3P37058 310 aa16.17■□□□□ 0.18
NIPAL3-204ENST00000374399 TUBP50607 506 aa16.17■□□□□ 0.18
NIPAL3-204ENST00000374399 EPHB3P54753 998 aa16.17■□□□□ 0.18
NIPAL3-204ENST00000374399 VEPH1Q14D04 833 aa16.17■□□□□ 0.18
NIPAL3-204ENST00000374399 HECTD3Q5T447 861 aa16.17■□□□□ 0.18
NIPAL3-204ENST00000374399 COL13A1Q5TAT6 717 aaPredicted RBP16.17■□□□□ 0.18
NIPAL3-204ENST00000374399 ANKRD22Q5VYY1 191 aa16.17■□□□□ 0.18
NIPAL3-204ENST00000374399 NADSYN1Q6IA69 706 aa16.17■□□□□ 0.18
NIPAL3-204ENST00000374399 TMC8Q8IU68 726 aa16.17■□□□□ 0.18
NIPAL3-204ENST00000374399 CDKL3Q8IVW4 592 aaPredicted RBP16.17■□□□□ 0.18
NIPAL3-204ENST00000374399 KREMEN2Q8NCW0 462 aa16.17■□□□□ 0.18
NIPAL3-204ENST00000374399 CPT1BQ92523 772 aa16.17■□□□□ 0.18
NIPAL3-204ENST00000374399 WBP2Q969T9 261 aa16.17■□□□□ 0.18
NIPAL3-204ENST00000374399 MYEOVQ96EZ4 313 aa16.17■□□□□ 0.18
NIPAL3-204ENST00000374399 NDFIP2Q9NV92 336 aa16.17■□□□□ 0.18
NIPAL3-204ENST00000374399 TRPM5Q9NZQ8 1165 aa16.17■□□□□ 0.18
NIPAL3-204ENST00000374399 DNMT3LQ9UJW3 386 aa16.17■□□□□ 0.18
NIPAL3-204ENST00000374399 TPX2Q9ULW0 747 aaKnown RBP16.17■□□□□ 0.18
NIPAL3-204ENST00000374399 HBS1LQ9Y450 684 aaKnown RBP16.17■□□□□ 0.18
NIPAL3-204ENST00000374399 SHROOM3Q8TF72 1996 aa16.17■□□□□ 0.18
NIPAL3-204ENST00000374399 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 IGLV3-10A0A075B6K4 115 aa16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 TCRBV7S3A2A0A539 114 aa16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 CFAP69A5D8W1 941 aa16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 HACD1B0YJ81 288 aa16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 C8AP07357 584 aa16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 HTR7P34969 479 aa16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 ATP5C1P36542 298 aaKnown RBP16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 CLCN4P51793 760 aa16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 UBE3AQ05086 875 aa16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 GAD2Q05329 585 aa16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 AUHQ13825 339 aaKnown RBP16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 NLRP14Q86W24 1093 aa16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 ARHGAP12Q8IWW6 846 aa16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 HS6ST3Q8IZP7 471 aa16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 PRCCQ92733 491 aaPredicted RBP16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 TBC1D31Q96DN5 1066 aa16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 BTN2A3PQ96KV6 586 aa16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 SLC22A12Q96S37 553 aa16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 CDK5RAP1Q96SZ6 601 aaKnown RBP16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 MPP6Q9NZW5 540 aa16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 ZNF212Q9UDV6 495 aa16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 MYO18AQ92614 2054 aaKnown RBP16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 NOTCH4Q99466 2003 aa16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 C5orf60A6NFR6 353 aa16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 GCATO75600 419 aa16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 KLKB1P03952 638 aa16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 RB1P06400 928 aa16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 PBX2P40425 430 aa16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 CAV1Q03135 178 aa16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 GALNT2Q10471 571 aa16.16■□□□□ 0.18
NIPAL3-204ENST00000374399 PDK1Q15118 436 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms