RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 HADHQ16836 314 aaKnown RBP14.77□□□□□ -0.05
HMGA1-203ENST00000374116 PKDCCQ504Y2 493 aa14.77□□□□□ -0.05
HMGA1-203ENST00000374116 TMC5Q6UXY8 1006 aa14.77□□□□□ -0.05
HMGA1-203ENST00000374116 PAQR9Q6ZVX9 377 aa14.77□□□□□ -0.05
HMGA1-203ENST00000374116 UNC93AQ86WB7 457 aa14.77□□□□□ -0.05
HMGA1-203ENST00000374116 KIRREL3Q8IZU9 778 aa14.77□□□□□ -0.05
HMGA1-203ENST00000374116 MAFAQ8NHW3 353 aaPredicted RBP14.77□□□□□ -0.05
HMGA1-203ENST00000374116 ZFAND2BQ8WV99 257 aa14.77□□□□□ -0.05
HMGA1-203ENST00000374116 TNIP3Q96KP6 325 aa14.77□□□□□ -0.05
HMGA1-203ENST00000374116 KCNK16Q96T55 309 aa14.77□□□□□ -0.05
HMGA1-203ENST00000374116 FAM118BQ9BPY3 351 aa14.77□□□□□ -0.05
HMGA1-203ENST00000374116 AFF4Q9UHB7 1163 aaKnown RBP14.77□□□□□ -0.05
HMGA1-203ENST00000374116 ZNF148Q9UQR1 794 aa14.77□□□□□ -0.05
HMGA1-203ENST00000374116 VCANP13611 3396 aa14.77□□□□□ -0.05
HMGA1-203ENST00000374116 LRRD1A4D1F6 860 aa14.76□□□□□ -0.05
HMGA1-203ENST00000374116 GOLGA8SH3BPF8 625 aa14.76□□□□□ -0.05
HMGA1-203ENST00000374116 CCL16O15467 120 aa14.76□□□□□ -0.05
HMGA1-203ENST00000374116 ACSL3O95573 720 aa14.76□□□□□ -0.05
HMGA1-203ENST00000374116 VPS41P49754 854 aa14.76□□□□□ -0.05
HMGA1-203ENST00000374116 ACAP1Q15027 740 aa14.76□□□□□ -0.05
HMGA1-203ENST00000374116 TXNRD3NBQ6F5E7 133 aa14.76□□□□□ -0.05
HMGA1-203ENST00000374116 SCN4BQ8IWT1 228 aa14.76□□□□□ -0.05
HMGA1-203ENST00000374116 CRYBG2Q8N1P7 616 aa14.76□□□□□ -0.05
HMGA1-203ENST00000374116 ALLCQ8N6M5 410 aa14.76□□□□□ -0.05
HMGA1-203ENST00000374116 JOSD2Q8TAC2 188 aa14.76□□□□□ -0.05
HMGA1-203ENST00000374116 SPATA18Q8TC71 538 aa14.76□□□□□ -0.05
HMGA1-203ENST00000374116 AGAP11Q8TF27 550 aa14.76□□□□□ -0.05
HMGA1-203ENST00000374116 GIPC2Q8TF65 315 aa14.76□□□□□ -0.05
HMGA1-203ENST00000374116 NKD2Q969F2 451 aaPredicted RBP14.76□□□□□ -0.05
HMGA1-203ENST00000374116 TBC1D31Q96DN5 1066 aa14.76□□□□□ -0.05
HMGA1-203ENST00000374116 THOC1Q96FV9 657 aaKnown RBP14.76□□□□□ -0.05
HMGA1-203ENST00000374116 SELENOSQ9BQE4 189 aa14.76□□□□□ -0.05
HMGA1-203ENST00000374116 FRMD8P1Q9BZ68 369 aaPredicted RBP14.76□□□□□ -0.05
HMGA1-203ENST00000374116 SYNCQ9H7C4 482 aa14.76□□□□□ -0.05
HMGA1-203ENST00000374116 DNPEPQ9ULA0 475 aa14.76□□□□□ -0.05
HMGA1-203ENST00000374116 PCDHB5Q9Y5E4 795 aa14.76□□□□□ -0.05
HMGA1-203ENST00000374116 PTPRDP23468 1912 aa14.76□□□□□ -0.05
HMGA1-203ENST00000374116 ITGAVP06756 1048 aa14.76□□□□□ -0.05
HMGA1-203ENST00000374116 FAM163BP0C2L3 166 aa14.76□□□□□ -0.05
HMGA1-203ENST00000374116 NEFHP12036 1026 aa14.76□□□□□ -0.05
HMGA1-203ENST00000374116 CHN1P15882 459 aa14.76□□□□□ -0.05
HMGA1-203ENST00000374116 KCNA5P22460 613 aa14.76□□□□□ -0.05
HMGA1-203ENST00000374116 SLCO1A2P46721 670 aa14.76□□□□□ -0.05
HMGA1-203ENST00000374116 VCPP55072 806 aaKnown RBP14.76□□□□□ -0.05
HMGA1-203ENST00000374116 SLC25A11Q02978 314 aaKnown RBP14.76□□□□□ -0.05
HMGA1-203ENST00000374116 TFF2Q03403 129 aa14.76□□□□□ -0.05
HMGA1-203ENST00000374116 STILQ15468 1287 aa14.76□□□□□ -0.05
HMGA1-203ENST00000374116 CTC1Q2NKJ3 1217 aa14.76□□□□□ -0.05
HMGA1-203ENST00000374116 P3H1Q32P28 736 aa14.76□□□□□ -0.05
HMGA1-203ENST00000374116 RARS2Q5T160 578 aaKnown RBP14.76□□□□□ -0.05
HMGA1-203ENST00000374116 ZCCHC9Q8N567 271 aaKnown RBP14.76□□□□□ -0.05
HMGA1-203ENST00000374116 SPDYE1Q8NFV5 336 aaPredicted RBP14.76□□□□□ -0.05
HMGA1-203ENST00000374116 MDM1Q8TC05 714 aa14.76□□□□□ -0.05
HMGA1-203ENST00000374116 CDCA3Q99618 268 aaPredicted RBP14.76□□□□□ -0.05
HMGA1-203ENST00000374116 ADAM7Q9H2U9 754 aa14.76□□□□□ -0.05
HMGA1-203ENST00000374116 HCFC1R1Q9NWW0 138 aa14.76□□□□□ -0.05
HMGA1-203ENST00000374116 NINJ2Q9NZG7 142 aa14.76□□□□□ -0.05
HMGA1-203ENST00000374116 CCDC195A0A1B0GUA6 201 aa14.75□□□□□ -0.05
HMGA1-203ENST00000374116 C3orf70A6NLC5 250 aaPredicted RBP14.75□□□□□ -0.05
HMGA1-203ENST00000374116 M0QYV0 167 aa14.75□□□□□ -0.05
HMGA1-203ENST00000374116 DNALI1O14645 258 aaPredicted RBP14.75□□□□□ -0.05
HMGA1-203ENST00000374116 NQO1P15559 274 aaKnown RBP14.75□□□□□ -0.05
HMGA1-203ENST00000374116 ATF6P18850 670 aa14.75□□□□□ -0.05
HMGA1-203ENST00000374116 TWF1Q12792 350 aa14.75□□□□□ -0.05
HMGA1-203ENST00000374116 OASLQ15646 514 aaKnown RBP14.75□□□□□ -0.05
HMGA1-203ENST00000374116 TAZQ16635 292 aa14.75□□□□□ -0.05
HMGA1-203ENST00000374116 KYNUQ16719 465 aa14.75□□□□□ -0.05
HMGA1-203ENST00000374116 TPGS2Q68CL5 300 aa14.75□□□□□ -0.05
HMGA1-203ENST00000374116 CWF19L1Q69YN2 538 aaKnown RBP14.75□□□□□ -0.05
HMGA1-203ENST00000374116 SYCE2Q6PIF2 218 aa14.75□□□□□ -0.05
HMGA1-203ENST00000374116 FAM35AQ86V20 835 aa14.75□□□□□ -0.05
HMGA1-203ENST00000374116 UBA3Q8TBC4 463 aa14.75□□□□□ -0.05
HMGA1-203ENST00000374116 CCDC77Q9BR77 488 aa14.75□□□□□ -0.05
HMGA1-203ENST00000374116 MIS12Q9H081 205 aa14.75□□□□□ -0.05
HMGA1-203ENST00000374116 KRT82Q9NSB4 513 aa14.75□□□□□ -0.05
HMGA1-203ENST00000374116 ZFATQ9P243 1243 aa14.75□□□□□ -0.05
HMGA1-203ENST00000374116 TSPAN16Q9UKR8 245 aa14.75□□□□□ -0.05
HMGA1-203ENST00000374116 INSL5Q9Y5Q6 135 aa14.75□□□□□ -0.05
HMGA1-203ENST00000374116 LRCH4O75427 683 aa14.74□□□□□ -0.05
HMGA1-203ENST00000374116 LINGO3P0C6S8 592 aa14.74□□□□□ -0.05
HMGA1-203ENST00000374116 GRIK1P39086 918 aa14.74□□□□□ -0.05
HMGA1-203ENST00000374116 ROR2Q01974 943 aaKnown RBP14.74□□□□□ -0.05
HMGA1-203ENST00000374116 IFRD2Q12894 506 aaPredicted RBP14.74□□□□□ -0.05
HMGA1-203ENST00000374116 NFE2Q16621 373 aaPredicted RBP14.74□□□□□ -0.05
HMGA1-203ENST00000374116 LONRF1Q17RB8 773 aa14.74□□□□□ -0.05
HMGA1-203ENST00000374116 PPM1LQ5SGD2 360 aa14.74□□□□□ -0.05
HMGA1-203ENST00000374116 ANKRD54Q6NXT1 300 aa14.74□□□□□ -0.05
HMGA1-203ENST00000374116 TCEAL8Q8IYN2 117 aa14.74□□□□□ -0.05
HMGA1-203ENST00000374116 DRAXINQ8NBI3 349 aaPredicted RBP14.74□□□□□ -0.05
HMGA1-203ENST00000374116 TTC13Q8NBP0 860 aa14.74□□□□□ -0.05
HMGA1-203ENST00000374116 CASP10Q92851 521 aa14.74□□□□□ -0.05
HMGA1-203ENST00000374116 PABPC5Q96DU9 382 aaKnown RBP14.74□□□□□ -0.05
HMGA1-203ENST00000374116 OXCT2Q9BYC2 517 aaPredicted RBP14.74□□□□□ -0.05
HMGA1-203ENST00000374116 METTL5Q9NRN9 209 aaKnown RBP14.74□□□□□ -0.05
HMGA1-203ENST00000374116 YIPF1Q9Y548 306 aa14.74□□□□□ -0.05
HMGA1-203ENST00000374116 C2orf16Q68DN1 1984 aa14.74□□□□□ -0.05
HMGA1-203ENST00000374116 AP1G2O75843 785 aa14.73□□□□□ -0.05
HMGA1-203ENST00000374116 ABHD2P08910 425 aa14.73□□□□□ -0.05
HMGA1-203ENST00000374116 HAPLN1P10915 354 aaPredicted RBP14.73□□□□□ -0.05
HMGA1-203ENST00000374116 IL1R2P27930 398 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms