RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 C1orf146Q5VVC0 180 aa13.11□□□□□ -0.31
CTPS1-202ENST00000372621 DPY19L2Q6NUT2 758 aa13.11□□□□□ -0.31
CTPS1-202ENST00000372621 CASC4Q6P4E1 433 aa13.11□□□□□ -0.31
CTPS1-202ENST00000372621 BNIPLQ7Z465 357 aa13.11□□□□□ -0.31
CTPS1-202ENST00000372621 ERO1BQ86YB8 467 aa13.11□□□□□ -0.31
CTPS1-202ENST00000372621 C10orf107Q8IVU9 208 aa13.11□□□□□ -0.31
CTPS1-202ENST00000372621 PHC3Q8NDX5 983 aa13.11□□□□□ -0.31
CTPS1-202ENST00000372621 PPP1R14CQ8TAE6 165 aa13.11□□□□□ -0.31
CTPS1-202ENST00000372621 EMID1Q96A84 441 aaPredicted RBP13.11□□□□□ -0.31
CTPS1-202ENST00000372621 C18orf25Q96B23 403 aaPredicted RBP13.11□□□□□ -0.31
CTPS1-202ENST00000372621 P2RY11Q96G91 374 aa13.11□□□□□ -0.31
CTPS1-202ENST00000372621 PRDM16Q9HAZ2 1276 aa13.11□□□□□ -0.31
CTPS1-202ENST00000372621 PIH1D1Q9NWS0 290 aaKnown RBP13.11□□□□□ -0.31
CTPS1-202ENST00000372621 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.11□□□□□ -0.31
CTPS1-202ENST00000372621 PPP1R1BQ9UD71 204 aaPredicted RBP13.11□□□□□ -0.31
CTPS1-202ENST00000372621 RGS17Q9UGC6 210 aaPredicted RBP13.11□□□□□ -0.31
CTPS1-202ENST00000372621 MEI4A8MW99 385 aa13.1□□□□□ -0.31
CTPS1-202ENST00000372621 SIN3BO75182 1162 aa13.1□□□□□ -0.31
CTPS1-202ENST00000372621 KLHL2O95198 593 aa13.1□□□□□ -0.31
CTPS1-202ENST00000372621 FESP07332 822 aa13.1□□□□□ -0.31
CTPS1-202ENST00000372621 MAGEA12P43365 314 aa13.1□□□□□ -0.31
CTPS1-202ENST00000372621 IDH3AP50213 366 aa13.1□□□□□ -0.31
CTPS1-202ENST00000372621 BTKQ06187 659 aa13.1□□□□□ -0.31
CTPS1-202ENST00000372621 OTUD1Q5VV17 481 aaPredicted RBP13.1□□□□□ -0.31
CTPS1-202ENST00000372621 C9orf57Q5W0N0 161 aa13.1□□□□□ -0.31
CTPS1-202ENST00000372621 ADGRG6Q86SQ4 1221 aa13.1□□□□□ -0.31
CTPS1-202ENST00000372621 ZNF410Q86VK4 478 aa13.1□□□□□ -0.31
CTPS1-202ENST00000372621 PSTKQ8IV42 348 aaKnown RBP13.1□□□□□ -0.31
CTPS1-202ENST00000372621 ISL2Q96A47 359 aa13.1□□□□□ -0.31
CTPS1-202ENST00000372621 NAT9Q9BTE0 207 aa13.1□□□□□ -0.31
CTPS1-202ENST00000372621 SCOCQ9UIL1 159 aa13.1□□□□□ -0.31
CTPS1-202ENST00000372621 PPM1HQ9ULR3 514 aa13.1□□□□□ -0.31
CTPS1-202ENST00000372621 MAGEA13PA6NCF6 341 aa13.1□□□□□ -0.31
CTPS1-202ENST00000372621 RNF103O00237 685 aa13.1□□□□□ -0.31
CTPS1-202ENST00000372621 PPP1R12AO14974 1030 aaPredicted RBP13.1□□□□□ -0.31
CTPS1-202ENST00000372621 BUD23O43709 281 aaKnown RBP13.1□□□□□ -0.31
CTPS1-202ENST00000372621 GRK2P25098 689 aa13.1□□□□□ -0.31
CTPS1-202ENST00000372621 LMO2P25791 158 aa13.1□□□□□ -0.31
CTPS1-202ENST00000372621 MATKP42679 507 aa13.1□□□□□ -0.31
CTPS1-202ENST00000372621 HARS2P49590 506 aaKnown RBP13.1□□□□□ -0.31
CTPS1-202ENST00000372621 SESN2P58004 480 aaPredicted RBP13.1□□□□□ -0.31
CTPS1-202ENST00000372621 SLC25A3Q00325 362 aa13.1□□□□□ -0.31
CTPS1-202ENST00000372621 PDE1BQ01064 536 aa13.1□□□□□ -0.31
CTPS1-202ENST00000372621 PPM1JQ5JR12 505 aa13.1□□□□□ -0.31
CTPS1-202ENST00000372621 ATP2A3Q93084 1043 aa13.1□□□□□ -0.31
CTPS1-202ENST00000372621 SYBUQ9NX95 663 aa13.1□□□□□ -0.31
CTPS1-202ENST00000372621 TMEM216Q9P0N5 145 aa13.1□□□□□ -0.31
CTPS1-202ENST00000372621 COPG2Q9UBF2 871 aa13.1□□□□□ -0.31
CTPS1-202ENST00000372621 APOBEC2Q9Y235 224 aaKnown RBP13.1□□□□□ -0.31
CTPS1-202ENST00000372621 SBF1O95248 1867 aa13.1□□□□□ -0.31
CTPS1-202ENST00000372621 SF3B1O75533 1304 aaKnown RBP eCLIP13.09□□□□□ -0.319e-6■■■■■ 68.9
CTPS1-202ENST00000372621 ADM5C9JUS6 153 aa13.09□□□□□ -0.31
CTPS1-202ENST00000372621 ADCY6O43306 1168 aa13.09□□□□□ -0.31
CTPS1-202ENST00000372621 CCNT2O60583 730 aaKnown RBP13.09□□□□□ -0.31
CTPS1-202ENST00000372621 FKBP6O75344 327 aa13.09□□□□□ -0.31
CTPS1-202ENST00000372621 ADORA2BP29275 332 aa13.09□□□□□ -0.31
CTPS1-202ENST00000372621 ARL4AP40617 200 aa13.09□□□□□ -0.31
CTPS1-202ENST00000372621 ACADSBP45954 432 aa13.09□□□□□ -0.31
CTPS1-202ENST00000372621 SLC25A52Q3SY17 297 aa13.09□□□□□ -0.31
CTPS1-202ENST00000372621 PGM2L1Q6PCE3 622 aa13.09□□□□□ -0.31
CTPS1-202ENST00000372621 AAGABQ6PD74 315 aa13.09□□□□□ -0.31
CTPS1-202ENST00000372621 GSTCDQ8NEC7 633 aa13.09□□□□□ -0.31
CTPS1-202ENST00000372621 NT5C3BQ969T7 300 aa13.09□□□□□ -0.31
CTPS1-202ENST00000372621 HSFY1Q96LI6 401 aa13.09□□□□□ -0.31
CTPS1-202ENST00000372621 NR1H4Q96RI1 486 aaPredicted RBP13.09□□□□□ -0.31
CTPS1-202ENST00000372621 PNPOQ9NVS9 261 aa13.09□□□□□ -0.31
CTPS1-202ENST00000372621 NDE1Q9NXR1 346 aa13.09□□□□□ -0.31
CTPS1-202ENST00000372621 RBM47A0AV96 593 aaKnown RBP13.09□□□□□ -0.31
CTPS1-202ENST00000372621 MYL4P12829 197 aa13.09□□□□□ -0.31
CTPS1-202ENST00000372621 PSMB4P28070 264 aa13.09□□□□□ -0.31
CTPS1-202ENST00000372621 HIC1Q14526 733 aa13.09□□□□□ -0.31
CTPS1-202ENST00000372621 FOXB2Q5VYV0 432 aa13.09□□□□□ -0.31
CTPS1-202ENST00000372621 FAM131BQ86XD5 332 aa13.09□□□□□ -0.31
CTPS1-202ENST00000372621 EIF2AQ9BY44 585 aaKnown RBP13.09□□□□□ -0.31
CTPS1-202ENST00000372621 ENO4A6NNW6 628 aa13.09□□□□□ -0.31
CTPS1-202ENST00000372621 PIRO00625 290 aa13.09□□□□□ -0.31
CTPS1-202ENST00000372621 AHCYL1O43865 530 aa13.09□□□□□ -0.31
CTPS1-202ENST00000372621 IREB2P48200 963 aaKnown RBP13.09□□□□□ -0.31
CTPS1-202ENST00000372621 DSG1Q02413 1049 aa13.09□□□□□ -0.31
CTPS1-202ENST00000372621 RNF220Q5VTB9 566 aa13.09□□□□□ -0.31
CTPS1-202ENST00000372621 POTEAQ6S8J7 498 aa13.09□□□□□ -0.31
CTPS1-202ENST00000372621 IZUMO2Q6UXV1 221 aa13.09□□□□□ -0.31
CTPS1-202ENST00000372621 LIMS2Q7Z4I7 341 aa13.09□□□□□ -0.31
CTPS1-202ENST00000372621 ZNF567Q8N184 647 aa13.09□□□□□ -0.31
CTPS1-202ENST00000372621 SLC25A41Q8N5S1 370 aa13.09□□□□□ -0.31
CTPS1-202ENST00000372621 NETO2Q8NC67 525 aa13.09□□□□□ -0.31
CTPS1-202ENST00000372621 BEST2Q8NFU1 509 aa13.09□□□□□ -0.31
CTPS1-202ENST00000372621 ECSITQ9BQ95 431 aa13.09□□□□□ -0.31
CTPS1-202ENST00000372621 ADAMTS10Q9H324 1103 aa13.09□□□□□ -0.31
CTPS1-202ENST00000372621 FAM96AQ9H5X1 160 aa13.09□□□□□ -0.31
CTPS1-202ENST00000372621 IL1RAPL1Q9NZN1 696 aa13.09□□□□□ -0.31
CTPS1-202ENST00000372621 IGSF9Q9P2J2 1179 aa13.09□□□□□ -0.31
CTPS1-202ENST00000372621 H3BRB1 525 aa13.08□□□□□ -0.32
CTPS1-202ENST00000372621 PDGFRBP09619 1106 aa13.08□□□□□ -0.32
CTPS1-202ENST00000372621 CHRM1P11229 460 aaPredicted RBP13.08□□□□□ -0.32
CTPS1-202ENST00000372621 COPAP53621 1224 aa13.08□□□□□ -0.32
CTPS1-202ENST00000372621 CACNA2D1P54289 1103 aa13.08□□□□□ -0.32
CTPS1-202ENST00000372621 ABCE1P61221 599 aaKnown RBP13.08□□□□□ -0.32
CTPS1-202ENST00000372621 RALGPS1Q5JS13 557 aa13.08□□□□□ -0.32
CTPS1-202ENST00000372621 SLC27A1Q6PCB7 646 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms