RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 TMEM216Q9P0N5 145 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 SIRPGQ9P1W8 387 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 TCEAL9Q9UHQ7 104 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 RPL26L1Q9UNX3 145 aaKnown RBP5.58□□□□□ -1.52
ATG4A-204ENST00000372246 RNF11Q9Y3C5 154 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 ABCA3Q99758 1704 aa5.58□□□□□ -1.52
ATG4A-204ENST00000372246 WDR27A2RRH5 827 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 SLC15A5A6NIM6 579 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 C9JVG2 144 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 E7ESA3 106 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 J3QRK9 145 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 FKBP6O75344 327 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 DGAT1O75907 488 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 TMCC1O94876 653 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 TGDSO95455 350 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 LTFP02788 710 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 ALDOAP04075 364 aaKnown RBP5.57□□□□□ -1.52
ATG4A-204ENST00000372246 ERBB2P04626 1255 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 SERPINA6P08185 405 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 SNRPAP09012 282 aaKnown RBP5.57□□□□□ -1.52
ATG4A-204ENST00000372246 GNAO1P09471 354 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 CCNYL3P0C7X3 344 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 KRT3P12035 628 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 CD247P20963 164 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 TRPC1P48995 793 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 RGS7P49802 495 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 KPNA1P52294 538 aaPredicted RBP5.57□□□□□ -1.52
ATG4A-204ENST00000372246 NDST2P52849 883 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 CDH6P55285 790 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 SESN2P58004 480 aaPredicted RBP5.57□□□□□ -1.52
ATG4A-204ENST00000372246 LMNB2Q03252 620 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 PPIDQ08752 370 aaKnown RBP5.57□□□□□ -1.52
ATG4A-204ENST00000372246 RALGDSQ12967 914 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 ITGA7Q13683 1181 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 CEACAM7Q14002 265 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 PDE1CQ14123 709 aaPredicted RBP5.57□□□□□ -1.52
ATG4A-204ENST00000372246 DBN1Q16643 649 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 TUSC1Q2TAM9 212 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 TTC39BQ5VTQ0 682 aaPredicted RBP5.57□□□□□ -1.52
ATG4A-204ENST00000372246 LAYNQ6UX15 382 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 XKR5Q6UX68 686 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 CYP2R1Q6VVX0 501 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 C15orf39Q6ZRI6 1047 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 FASTKD5Q7L8L6 764 aaKnown RBP5.57□□□□□ -1.52
ATG4A-204ENST00000372246 SESTD1Q86VW0 696 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 SNX32Q86XE0 403 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 PHF13Q86YI8 300 aaPredicted RBP5.57□□□□□ -1.52
ATG4A-204ENST00000372246 TP53INP2Q8IXH6 220 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 BHLHE22Q8NFJ8 381 aaPredicted RBP5.57□□□□□ -1.52
ATG4A-204ENST00000372246 DIS3LQ8TF46 1054 aaKnown RBP5.57□□□□□ -1.52
ATG4A-204ENST00000372246 ATP6V1E2Q96A05 226 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 DCPSQ96C86 337 aaKnown RBP5.57□□□□□ -1.52
ATG4A-204ENST00000372246 FBXL8Q96CD0 374 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 CCDC17Q96LX7 622 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 OLFM3Q96PB7 478 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 NPAS2Q99743 824 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 ACO2Q99798 780 aaKnown RBP5.57□□□□□ -1.52
ATG4A-204ENST00000372246 GLT8D2Q9H1C3 349 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 POLR3FQ9H1D9 316 aaPredicted RBP5.57□□□□□ -1.52
ATG4A-204ENST00000372246 SOX17Q9H6I2 414 aaPredicted RBP5.57□□□□□ -1.52
ATG4A-204ENST00000372246 CISHQ9NSE2 258 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 BTBD7Q9P203 1132 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 AGO2Q9UKV8 859 aaKnown RBP5.57□□□□□ -1.52
ATG4A-204ENST00000372246 TMCO1Q9UM00 188 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 CDC14AQ9UNH5 594 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 DRG1Q9Y295 367 aaKnown RBP5.57□□□□□ -1.52
ATG4A-204ENST00000372246 RIPK3Q9Y572 518 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 CEPT1Q9Y6K0 416 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 UBE4BO95155 1302 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 A8MU76 341 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 HNRNPCL1O60812 293 aaKnown RBP5.57□□□□□ -1.52
ATG4A-204ENST00000372246 SNNO75324 88 aaPredicted RBP5.57□□□□□ -1.52
ATG4A-204ENST00000372246 TRMUO75648 421 aaKnown RBP5.57□□□□□ -1.52
ATG4A-204ENST00000372246 RNASEH2AO75792 299 aaKnown RBP5.57□□□□□ -1.52
ATG4A-204ENST00000372246 STAM2O75886 525 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 KRT19P08727 400 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 ERVK-10P10266 1014 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 THRAP10827 490 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 DESP17661 470 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 CDH2P19022 906 aaPredicted RBP5.57□□□□□ -1.52
ATG4A-204ENST00000372246 MPSTP25325 297 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 MLH1P40692 756 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 RPL5P46777 297 aaKnown RBP5.57□□□□□ -1.52
ATG4A-204ENST00000372246 YAP1P46937 504 aaKnown RBP5.57□□□□□ -1.52
ATG4A-204ENST00000372246 CSE1LP55060 971 aaKnown RBP5.57□□□□□ -1.52
ATG4A-204ENST00000372246 PSMC1P62191 440 aaKnown RBP5.57□□□□□ -1.52
ATG4A-204ENST00000372246 YBX1P67809 324 aaKnown RBP5.57□□□□□ -1.52
ATG4A-204ENST00000372246 KCNJ11Q14654 390 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 PCLAFQ15004 111 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 DNAL1Q4LDG9 190 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 MFSD4BQ5TF39 518 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 PGM2L1Q6PCE3 622 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 KBTBD6Q86V97 674 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 ZNF410Q86VK4 478 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 C12orf56Q8IXR9 622 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 TMEM192Q8IY95 271 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 NUP93Q8N1F7 819 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 PQLC1Q8N2U9 271 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 FBXW8Q8N3Y1 598 aa5.57□□□□□ -1.52
ATG4A-204ENST00000372246 PCDH20Q8N6Y1 951 aaKnown RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms