RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 CCDC26Q8TAB7 109 aa15.35■□□□□ 0.05
COL9A1-204ENST00000370496 P2RY11Q96G91 374 aa15.35■□□□□ 0.05
COL9A1-204ENST00000370496 NUP85Q9BW27 656 aa15.35■□□□□ 0.05
COL9A1-204ENST00000370496 SPATA6Q9NWH7 488 aaPredicted RBP15.35■□□□□ 0.05
COL9A1-204ENST00000370496 DLGAP2Q9P1A6 1054 aa15.35■□□□□ 0.05
COL9A1-204ENST00000370496 VANGL2Q9ULK5 521 aa15.35■□□□□ 0.05
COL9A1-204ENST00000370496 HCN4Q9Y3Q4 1203 aa15.35■□□□□ 0.05
COL9A1-204ENST00000370496 HS3ST4Q9Y661 456 aa15.35■□□□□ 0.05
COL9A1-204ENST00000370496 TMEM191CA6NGB0 347 aa15.34■□□□□ 0.05
COL9A1-204ENST00000370496 GFRA2O00451 464 aa15.34■□□□□ 0.05
COL9A1-204ENST00000370496 TRIM24O15164 1050 aa15.34■□□□□ 0.05
COL9A1-204ENST00000370496 ENDOD1O94919 500 aa15.34■□□□□ 0.05
COL9A1-204ENST00000370496 H2AFZP0C0S5 128 aa15.34■□□□□ 0.05
COL9A1-204ENST00000370496 MESP2Q0VG99 397 aa15.34■□□□□ 0.05
COL9A1-204ENST00000370496 AUHQ13825 339 aaKnown RBP15.34■□□□□ 0.05
COL9A1-204ENST00000370496 RAB6CQ53S08 254 aa15.34■□□□□ 0.05
COL9A1-204ENST00000370496 MPP7Q5T2T1 576 aa15.34■□□□□ 0.05
COL9A1-204ENST00000370496 ACBD5Q5T8D3 534 aaPredicted RBP15.34■□□□□ 0.05
COL9A1-204ENST00000370496 SCYL2Q6P3W7 929 aa15.34■□□□□ 0.05
COL9A1-204ENST00000370496 H2AFVQ71UI9 128 aa15.34■□□□□ 0.05
COL9A1-204ENST00000370496 PHTF2Q8N3S3 785 aa15.34■□□□□ 0.05
COL9A1-204ENST00000370496 CARNMT1Q8N4J0 409 aa15.34■□□□□ 0.05
COL9A1-204ENST00000370496 FNIP1Q8TF40 1166 aa15.34■□□□□ 0.05
COL9A1-204ENST00000370496 CENPIQ92674 756 aaPredicted RBP15.34■□□□□ 0.05
COL9A1-204ENST00000370496 ARHGEF26Q96DR7 871 aa15.34■□□□□ 0.05
COL9A1-204ENST00000370496 MYEOVQ96EZ4 313 aa15.34■□□□□ 0.05
COL9A1-204ENST00000370496 PRMT1Q99873 361 aaKnown RBP15.34■□□□□ 0.05
COL9A1-204ENST00000370496 PACSIN1Q9BY11 444 aa15.34■□□□□ 0.05
COL9A1-204ENST00000370496 SLC2A11Q9BYW1 496 aa15.34■□□□□ 0.05
COL9A1-204ENST00000370496 RAB6CQ9H0N0 254 aa15.34■□□□□ 0.05
COL9A1-204ENST00000370496 GRPEL1Q9HAV7 217 aa15.34■□□□□ 0.05
COL9A1-204ENST00000370496 ANLNQ9NQW6 1124 aa15.34■□□□□ 0.05
COL9A1-204ENST00000370496 TMPRSS4Q9NRS4 437 aa15.34■□□□□ 0.05
COL9A1-204ENST00000370496 ANAPC7Q9UJX3 599 aa15.34■□□□□ 0.05
COL9A1-204ENST00000370496 A0A1B0GVM2 712 aa15.33■□□□□ 0.04
COL9A1-204ENST00000370496 TCAF2A6NFQ2 919 aa15.33■□□□□ 0.04
COL9A1-204ENST00000370496 RNF8O76064 485 aa15.33■□□□□ 0.04
COL9A1-204ENST00000370496 LUC7L3O95232 432 aaKnown RBP15.33■□□□□ 0.04
COL9A1-204ENST00000370496 CYP1A2P05177 515 aa15.33■□□□□ 0.04
COL9A1-204ENST00000370496 CYLC1P35663 651 aaPredicted RBP15.33■□□□□ 0.04
COL9A1-204ENST00000370496 MTAPQ13126 283 aa15.33■□□□□ 0.04
COL9A1-204ENST00000370496 FZD5Q13467 585 aa15.33■□□□□ 0.04
COL9A1-204ENST00000370496 EFHC2Q5JST6 749 aa15.33■□□□□ 0.04
COL9A1-204ENST00000370496 FBXL22Q6P050 247 aa15.33■□□□□ 0.04
COL9A1-204ENST00000370496 LRRC31Q6UY01 552 aa15.33■□□□□ 0.04
COL9A1-204ENST00000370496 CIR1Q86X95 450 aaPredicted RBP15.33■□□□□ 0.04
COL9A1-204ENST00000370496 SFTPA1Q8IWL2 248 aa15.33■□□□□ 0.04
COL9A1-204ENST00000370496 CCDC185Q8N715 623 aa15.33■□□□□ 0.04
COL9A1-204ENST00000370496 RPLP0P6Q8NHW5 317 aa15.33■□□□□ 0.04
COL9A1-204ENST00000370496 ZNF564Q8TBZ8 553 aaPredicted RBP15.33■□□□□ 0.04
COL9A1-204ENST00000370496 EZH1Q92800 747 aaPredicted RBP15.33■□□□□ 0.04
COL9A1-204ENST00000370496 ACDQ96AP0 544 aa15.33■□□□□ 0.04
COL9A1-204ENST00000370496 HAPLN3Q96S86 360 aa15.33■□□□□ 0.04
COL9A1-204ENST00000370496 TRIM7Q9C029 511 aa15.33■□□□□ 0.04
COL9A1-204ENST00000370496 CTTNBP2NLQ9P2B4 639 aa15.33■□□□□ 0.04
COL9A1-204ENST00000370496 SOWAHDA6NJG2 315 aa15.32■□□□□ 0.04
COL9A1-204ENST00000370496 H0Y626 953 aa15.32■□□□□ 0.04
COL9A1-204ENST00000370496 I6L893 689 aaPredicted RBP15.32■□□□□ 0.04
COL9A1-204ENST00000370496 K7EQS6 105 aa15.32■□□□□ 0.04
COL9A1-204ENST00000370496 LAMTOR5O43504 91 aa15.32■□□□□ 0.04
COL9A1-204ENST00000370496 IPO7O95373 1038 aaKnown RBP15.32■□□□□ 0.04
COL9A1-204ENST00000370496 TMEM253P0C7T8 217 aa15.32■□□□□ 0.04
COL9A1-204ENST00000370496 TNFRSF4P43489 277 aa15.32■□□□□ 0.04
COL9A1-204ENST00000370496 NUBP1P53384 320 aa15.32■□□□□ 0.04
COL9A1-204ENST00000370496 ZNF252P-AS1Q0IIN9 211 aa15.32■□□□□ 0.04
COL9A1-204ENST00000370496 SPA17Q15506 151 aa15.32■□□□□ 0.04
COL9A1-204ENST00000370496 C2orf27AQ580R0 203 aa15.32■□□□□ 0.04
COL9A1-204ENST00000370496 CCDC170Q8IYT3 715 aa15.32■□□□□ 0.04
COL9A1-204ENST00000370496 NTAN1Q96AB6 310 aa15.32■□□□□ 0.04
COL9A1-204ENST00000370496 LUC7LQ9NQ29 371 aaKnown RBP15.32■□□□□ 0.04
COL9A1-204ENST00000370496 ABCB8Q9NUT2 735 aa15.32■□□□□ 0.04
COL9A1-204ENST00000370496 GGA2Q9UJY4 613 aa15.32■□□□□ 0.04
COL9A1-204ENST00000370496 CLEC4EQ9ULY5 219 aa15.32■□□□□ 0.04
COL9A1-204ENST00000370496 SLC27A6Q9Y2P4 619 aa15.32■□□□□ 0.04
COL9A1-204ENST00000370496 SNX10Q9Y5X0 201 aa15.32■□□□□ 0.04
COL9A1-204ENST00000370496 E9PAM4 449 aa15.31■□□□□ 0.04
COL9A1-204ENST00000370496 GALR2O43603 387 aaPredicted RBP15.31■□□□□ 0.04
COL9A1-204ENST00000370496 ATG13O75143 517 aa15.31■□□□□ 0.04
COL9A1-204ENST00000370496 CISD3P0C7P0 127 aa15.31■□□□□ 0.04
COL9A1-204ENST00000370496 HLA-FP30511 346 aa15.31■□□□□ 0.04
COL9A1-204ENST00000370496 ADRA1BP35368 520 aa15.31■□□□□ 0.04
COL9A1-204ENST00000370496 TIE1P35590 1138 aa15.31■□□□□ 0.04
COL9A1-204ENST00000370496 CCR3P51677 355 aa15.31■□□□□ 0.04
COL9A1-204ENST00000370496 GSDMDP57764 484 aa15.31■□□□□ 0.04
COL9A1-204ENST00000370496 GEN1Q17RS7 908 aa15.31■□□□□ 0.04
COL9A1-204ENST00000370496 TRMT11Q7Z4G4 463 aaKnown RBP15.31■□□□□ 0.04
COL9A1-204ENST00000370496 SLFN11Q7Z7L1 901 aa15.31■□□□□ 0.04
COL9A1-204ENST00000370496 C14orf80Q86SX3 495 aa15.31■□□□□ 0.04
COL9A1-204ENST00000370496 TMTC1Q8IUR5 882 aa15.31■□□□□ 0.04
COL9A1-204ENST00000370496 C1orf210Q8IVY1 113 aa15.31■□□□□ 0.04
COL9A1-204ENST00000370496 AHI1Q8N157 1196 aa15.31■□□□□ 0.04
COL9A1-204ENST00000370496 SPEM1Q8N4L4 309 aa15.31■□□□□ 0.04
COL9A1-204ENST00000370496 ZNF513Q8N8E2 541 aaPredicted RBP15.31■□□□□ 0.04
COL9A1-204ENST00000370496 WFDC5Q8TCV5 224 aa15.31■□□□□ 0.04
COL9A1-204ENST00000370496 WFIKKN2Q8TEU8 576 aa15.31■□□□□ 0.04
COL9A1-204ENST00000370496 PRRX2Q99811 253 aa15.31■□□□□ 0.04
COL9A1-204ENST00000370496 BAG1Q99933 345 aaPredicted RBP15.31■□□□□ 0.04
COL9A1-204ENST00000370496 CIPCQ9C0C6 399 aa15.31■□□□□ 0.04
COL9A1-204ENST00000370496 UVRAGQ9P2Y5 699 aa15.31■□□□□ 0.04
COL9A1-204ENST00000370496 IP6K2Q9UHH9 426 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms