RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 P3H1Q32P28 736 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 DCAF17Q5H9S7 520 aaPredicted RBP7.12□□□□□ -1.27
CSDE1-204ENST00000369530 GAREM2Q75VX8 874 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 CROCCP2Q86T23 111 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 MYCT1Q8N699 235 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 ZNF461Q8TAF7 563 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 CASP10Q92851 521 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 RBM38Q9H0Z9 239 aaKnown RBP7.12□□□□□ -1.27
CSDE1-204ENST00000369530 GBA3Q9H227 469 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 RHBDL2Q9NX52 303 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 LNPEPQ9UIQ6 1025 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 SNX9Q9Y5X1 595 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 A0A1W2PQJ5 194 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 H0YCG3 227 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 ENC1O14682 589 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 HNRNPCL1O60812 293 aaKnown RBP7.12□□□□□ -1.27
CSDE1-204ENST00000369530 HAPLN1P10915 354 aaPredicted RBP7.12□□□□□ -1.27
CSDE1-204ENST00000369530 CTNNB1P35222 781 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 DNA2P51530 1060 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 ROR1Q01973 937 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 VARS2Q5ST30 1063 aaKnown RBP7.12□□□□□ -1.27
CSDE1-204ENST00000369530 PDXDC1Q6P996 788 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 NANOGNBQ7Z5D8 188 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 CCNJLQ8IV13 435 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 TRIM59Q8IWR1 403 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 SLC7A5P1Q8MH63 180 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 NT5C3BQ969T7 300 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 VPS50Q96JG6 964 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 ZNF668Q96K58 619 aaPredicted RBP7.12□□□□□ -1.27
CSDE1-204ENST00000369530 ADAM33Q9BZ11 813 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 OSBPL6Q9BZF3 934 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 SYNCQ9H7C4 482 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 NLRC4Q9NPP4 1024 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 KMT5AQ9NQR1 393 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 COMMD8Q9NX08 183 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 SAMD15Q9P1V8 674 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 GUCA1BQ9UMX6 200 aa7.12□□□□□ -1.27
CSDE1-204ENST00000369530 TTC34A8MYJ7 566 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 SUPT3HO75486 399 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 HNRNPCP07910 306 aaKnown RBP eCLIP7.11□□□□□ -1.273e-6■■■□□ 18.5
CSDE1-204ENST00000369530 CCDC159P0C7I6 412 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 VASPP50552 380 aaPredicted RBP7.11□□□□□ -1.27
CSDE1-204ENST00000369530 DMP1Q13316 513 aaPredicted RBP7.11□□□□□ -1.27
CSDE1-204ENST00000369530 FAAH2Q6GMR7 532 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 PM20D1Q6GTS8 502 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 VPS52Q8N1B4 723 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 TTC9BQ8N6N2 239 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 RDH13Q8NBN7 331 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 USP33Q8TEY7 942 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 SLC35C1Q96A29 364 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 ZSWIM3Q96MP5 696 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 YME1L1Q96TA2 773 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 ACBD6Q9BR61 282 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 TXLNGQ9NUQ3 528 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 ARL2BPQ9Y2Y0 163 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 ATP8B3O60423 1300 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 ZZEF1O43149 2961 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 ARHGEF35A5YM69 484 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 CAPNS1P04632 268 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 THP07101 528 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 PDHA1P08559 390 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 POLR2EP19388 210 aaKnown RBP7.11□□□□□ -1.27
CSDE1-204ENST00000369530 DNM2P50570 870 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 CCDC122Q5T0U0 273 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 PLPP4Q5VZY2 271 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 LRRC34Q8IZ02 419 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 FAM13CQ8NE31 585 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 B3GALT6Q96L58 329 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 NECAB3Q96P71 396 aaPredicted RBP7.11□□□□□ -1.27
CSDE1-204ENST00000369530 CCT7Q99832 543 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 FAM83CQ9BQN1 747 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 PNPLA8Q9NP80 782 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 HSPBP1Q9NZL4 362 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 NFU1Q9UMS0 254 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 PCDHB13Q9Y5F0 798 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 RCCD1A6NED2 376 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 CLIC2O15247 247 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 HCRTO43612 131 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 GLUD2P49448 558 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 CASP4P49662 377 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 GUCY2FP51841 1108 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 EIF2B5Q13144 721 aaKnown RBP7.11□□□□□ -1.27
CSDE1-204ENST00000369530 MSLNQ13421 630 aaPredicted RBP7.11□□□□□ -1.27
CSDE1-204ENST00000369530 DCTN2Q13561 401 aaKnown RBP7.11□□□□□ -1.27
CSDE1-204ENST00000369530 CYLC2Q14093 348 aaPredicted RBP7.11□□□□□ -1.27
CSDE1-204ENST00000369530 ZNF77Q15935 545 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 PTPROQ16827 1216 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 CCDC142Q17RM4 750 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 USP41Q3LFD5 358 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 TRIM68Q6AZZ1 485 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 SPATA24Q86W54 205 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 CDR2LQ86X02 465 aaPredicted RBP7.11□□□□□ -1.27
CSDE1-204ENST00000369530 RNF135Q8IUD6 432 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 CBWD2Q8IUF1 395 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 CCDC105Q8IYK2 499 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 METTL13Q8N6R0 699 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 CLIP3Q96DZ5 547 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 ASB16Q96NS5 453 aa7.11□□□□□ -1.27
CSDE1-204ENST00000369530 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.11□□□□□ -1.27
CSDE1-204ENST00000369530 RABL2BQ9UNT1 228 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms