RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 F9P00740 461 aa15.61■□□□□ 0.09
SMPDL3A-201ENST00000368440 IRAK1P51617 712 aa15.61■□□□□ 0.09
SMPDL3A-201ENST00000368440 HDAC4P56524 1084 aa15.61■□□□□ 0.09
SMPDL3A-201ENST00000368440 TCF15Q12870 199 aa15.61■□□□□ 0.09
SMPDL3A-201ENST00000368440 BRMS1LQ5PSV4 323 aa15.61■□□□□ 0.09
SMPDL3A-201ENST00000368440 CCDC122Q5T0U0 273 aa15.61■□□□□ 0.09
SMPDL3A-201ENST00000368440 C10orf76Q5T2E6 689 aa15.61■□□□□ 0.09
SMPDL3A-201ENST00000368440 RNF43Q68DV7 783 aa15.61■□□□□ 0.09
SMPDL3A-201ENST00000368440 DCUN1D2Q6PH85 259 aa15.61■□□□□ 0.09
SMPDL3A-201ENST00000368440 SND1Q7KZF4 910 aaKnown RBP eCLIP15.61■□□□□ 0.09
SMPDL3A-201ENST00000368440 C14orf80Q86SX3 495 aa15.61■□□□□ 0.09
SMPDL3A-201ENST00000368440 CIR1Q86X95 450 aaPredicted RBP15.61■□□□□ 0.09
SMPDL3A-201ENST00000368440 C1orf210Q8IVY1 113 aa15.61■□□□□ 0.09
SMPDL3A-201ENST00000368440 HJURPQ8NCD3 748 aaPredicted RBP15.61■□□□□ 0.09
SMPDL3A-201ENST00000368440 RPLP0P6Q8NHW5 317 aa15.61■□□□□ 0.09
SMPDL3A-201ENST00000368440 CENPIQ92674 756 aaPredicted RBP15.61■□□□□ 0.09
SMPDL3A-201ENST00000368440 THAP2Q9H0W7 228 aa15.61■□□□□ 0.09
SMPDL3A-201ENST00000368440 PARVAQ9NVD7 372 aa15.61■□□□□ 0.09
SMPDL3A-201ENST00000368440 ZNHIT6Q9NWK9 470 aaKnown RBP15.61■□□□□ 0.09
SMPDL3A-201ENST00000368440 SLC12A6Q9UHW9 1150 aa15.61■□□□□ 0.09
SMPDL3A-201ENST00000368440 SSU72P8A0A1W2PR75 194 aa15.6■□□□□ 0.09
SMPDL3A-201ENST00000368440 TBC1D3BA6NDS4 549 aa15.6■□□□□ 0.09
SMPDL3A-201ENST00000368440 ZNF143P52747 638 aaPredicted RBP15.6■□□□□ 0.09
SMPDL3A-201ENST00000368440 SATB1Q01826 763 aa15.6■□□□□ 0.09
SMPDL3A-201ENST00000368440 ZNF252P-AS1Q0IIN9 211 aa15.6■□□□□ 0.09
SMPDL3A-201ENST00000368440 ANGPT1Q15389 498 aa15.6■□□□□ 0.09
SMPDL3A-201ENST00000368440 GEN1Q17RS7 908 aa15.6■□□□□ 0.09
SMPDL3A-201ENST00000368440 FBXO43Q4G163 708 aa15.6■□□□□ 0.09
SMPDL3A-201ENST00000368440 C2orf27AQ580R0 203 aa15.6■□□□□ 0.09
SMPDL3A-201ENST00000368440 USP33Q8TEY7 942 aa15.6■□□□□ 0.09
SMPDL3A-201ENST00000368440 ARHGEF26Q96DR7 871 aa15.6■□□□□ 0.09
SMPDL3A-201ENST00000368440 DDX50Q9BQ39 737 aaKnown RBP15.6■□□□□ 0.09
SMPDL3A-201ENST00000368440 SIK2Q9H0K1 926 aa15.6■□□□□ 0.09
SMPDL3A-201ENST00000368440 F5H5T6 163 aa15.59■□□□□ 0.09
SMPDL3A-201ENST00000368440 HLA-FP30511 346 aa15.59■□□□□ 0.09
SMPDL3A-201ENST00000368440 TIE1P35590 1138 aa15.59■□□□□ 0.09
SMPDL3A-201ENST00000368440 KIR2DL1P43626 348 aaPredicted RBP15.59■□□□□ 0.09
SMPDL3A-201ENST00000368440 AUHQ13825 339 aaKnown RBP15.59■□□□□ 0.09
SMPDL3A-201ENST00000368440 SLC18A3Q16572 532 aa15.59■□□□□ 0.09
SMPDL3A-201ENST00000368440 TSR1Q2NL82 804 aaKnown RBP15.59■□□□□ 0.09
SMPDL3A-201ENST00000368440 FBXL22Q6P050 247 aa15.59■□□□□ 0.09
SMPDL3A-201ENST00000368440 TSSK4Q6SA08 328 aa15.59■□□□□ 0.09
SMPDL3A-201ENST00000368440 STRADAQ7RTN6 431 aa15.59■□□□□ 0.09
SMPDL3A-201ENST00000368440 SPEM1Q8N4L4 309 aa15.59■□□□□ 0.09
SMPDL3A-201ENST00000368440 CCDC185Q8N715 623 aa15.59■□□□□ 0.09
SMPDL3A-201ENST00000368440 IGSF8Q969P0 613 aa15.59■□□□□ 0.09
SMPDL3A-201ENST00000368440 PACSIN1Q9BY11 444 aa15.59■□□□□ 0.09
SMPDL3A-201ENST00000368440 MAGEB5Q9BZ81 275 aa15.59■□□□□ 0.09
SMPDL3A-201ENST00000368440 NHEJ1Q9H9Q4 299 aaPredicted RBP15.59■□□□□ 0.09
SMPDL3A-201ENST00000368440 SPTLC3Q9NUV7 552 aa15.59■□□□□ 0.09
SMPDL3A-201ENST00000368440 VANGL2Q9ULK5 521 aa15.59■□□□□ 0.09
SMPDL3A-201ENST00000368440 SLC27A6Q9Y2P4 619 aa15.59■□□□□ 0.09
SMPDL3A-201ENST00000368440 HCN4Q9Y3Q4 1203 aa15.59■□□□□ 0.09
SMPDL3A-201ENST00000368440 MUC22E2RYF6 1773 aaPredicted RBP15.59■□□□□ 0.09
SMPDL3A-201ENST00000368440 CACNA1IQ9P0X4 2223 aa15.59■□□□□ 0.09
SMPDL3A-201ENST00000368440 TMEM191CA6NGB0 347 aa15.59■□□□□ 0.09
SMPDL3A-201ENST00000368440 H0Y858 1186 aa15.59■□□□□ 0.09
SMPDL3A-201ENST00000368440 MYBL1P10243 752 aa15.59■□□□□ 0.09
SMPDL3A-201ENST00000368440 TNFRSF4P43489 277 aa15.59■□□□□ 0.09
SMPDL3A-201ENST00000368440 NUBP1P53384 320 aa15.59■□□□□ 0.09
SMPDL3A-201ENST00000368440 GALCP54803 685 aa15.59■□□□□ 0.09
SMPDL3A-201ENST00000368440 MPP7Q5T2T1 576 aa15.59■□□□□ 0.09
SMPDL3A-201ENST00000368440 ARTNQ5T4W7 220 aa15.59■□□□□ 0.09
SMPDL3A-201ENST00000368440 ZNF683Q8IZ20 524 aa15.59■□□□□ 0.09
SMPDL3A-201ENST00000368440 TRIM11Q96F44 468 aa15.59■□□□□ 0.09
SMPDL3A-201ENST00000368440 IRX2Q9BZI1 471 aaPredicted RBP15.59■□□□□ 0.09
SMPDL3A-201ENST00000368440 KCNF1Q9H3M0 494 aa15.59■□□□□ 0.09
SMPDL3A-201ENST00000368440 DEF6Q9H4E7 631 aa15.59■□□□□ 0.09
SMPDL3A-201ENST00000368440 ANKRD62A6NC57 917 aa15.58■□□□□ 0.08
SMPDL3A-201ENST00000368440 CHURC1-FNTBB4DL54 471 aa15.58■□□□□ 0.08
SMPDL3A-201ENST00000368440 LAMTOR5O43504 91 aa15.58■□□□□ 0.08
SMPDL3A-201ENST00000368440 CD70P32970 193 aa15.58■□□□□ 0.08
SMPDL3A-201ENST00000368440 HS1BP3Q53T59 392 aa15.58■□□□□ 0.08
SMPDL3A-201ENST00000368440 FSCBQ5H9T9 825 aa15.58■□□□□ 0.08
SMPDL3A-201ENST00000368440 EGFLAMQ63HQ2 1017 aa15.58■□□□□ 0.08
SMPDL3A-201ENST00000368440 TMEM215Q68D42 235 aa15.58■□□□□ 0.08
SMPDL3A-201ENST00000368440 MFN1Q8IWA4 741 aa15.58■□□□□ 0.08
SMPDL3A-201ENST00000368440 CARNMT1Q8N4J0 409 aa15.58■□□□□ 0.08
SMPDL3A-201ENST00000368440 CCDC33Q8N5R6 958 aa15.58■□□□□ 0.08
SMPDL3A-201ENST00000368440 ALLCQ8N6M5 410 aa15.58■□□□□ 0.08
SMPDL3A-201ENST00000368440 CNPY3Q9BT09 278 aa15.58■□□□□ 0.08
SMPDL3A-201ENST00000368440 IER2Q9BTL4 223 aa15.58■□□□□ 0.08
SMPDL3A-201ENST00000368440 SLC2A11Q9BYW1 496 aa15.58■□□□□ 0.08
SMPDL3A-201ENST00000368440 PRMT8Q9NR22 394 aaPredicted RBP15.58■□□□□ 0.08
SMPDL3A-201ENST00000368440 ABCB8Q9NUT2 735 aa15.58■□□□□ 0.08
SMPDL3A-201ENST00000368440 PAXBP1Q9Y5B6 917 aa15.58■□□□□ 0.08
SMPDL3A-201ENST00000368440 SCINQ9Y6U3 715 aa15.58■□□□□ 0.08
SMPDL3A-201ENST00000368440 DOCK4Q8N1I0 1966 aa15.58■□□□□ 0.08
SMPDL3A-201ENST00000368440 AKR1B10O60218 316 aa15.57■□□□□ 0.08
SMPDL3A-201ENST00000368440 PSMA2P25787 234 aa15.57■□□□□ 0.08
SMPDL3A-201ENST00000368440 PREPLQ4J6C6 727 aaPredicted RBP15.57■□□□□ 0.08
SMPDL3A-201ENST00000368440 ANKS1BQ7Z6G8 1248 aa15.57■□□□□ 0.08
SMPDL3A-201ENST00000368440 IL17RCQ8NAC3 791 aa15.57■□□□□ 0.08
SMPDL3A-201ENST00000368440 RPRD1AQ96P16 312 aaPredicted RBP15.57■□□□□ 0.08
SMPDL3A-201ENST00000368440 ACOX2Q99424 681 aa15.57■□□□□ 0.08
SMPDL3A-201ENST00000368440 TYW5A2RUC4 315 aaKnown RBP15.57■□□□□ 0.08
SMPDL3A-201ENST00000368440 LUC7L3O95232 432 aaKnown RBP15.57■□□□□ 0.08
SMPDL3A-201ENST00000368440 KLF8O95600 359 aaPredicted RBP15.57■□□□□ 0.08
SMPDL3A-201ENST00000368440 CYP1A2P05177 515 aa15.57■□□□□ 0.08
SMPDL3A-201ENST00000368440 TDGF1P13385 188 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms