RNA–Protein interactions for RNA: ENST00000368407.7

EFNA1-202, Transcript of ephrin A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNA1, Length 1,926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-202ENST00000368407 SUSD3Q96L08 255 aa27.33■■□□□ 1.97
EFNA1-202ENST00000368407 TWNKQ96RR1 684 aa27.33■■□□□ 1.97
EFNA1-202ENST00000368407 YIPF3Q9GZM5 350 aa27.33■■□□□ 1.97
EFNA1-202ENST00000368407 ARL8BQ9NVJ2 186 aa27.33■■□□□ 1.97
EFNA1-202ENST00000368407 PCDHGC3Q9UN70 934 aa27.33■■□□□ 1.97
EFNA1-202ENST00000368407 M0QZQ0 153 aa27.32■■□□□ 1.96
EFNA1-202ENST00000368407 LINC00271P0C7V0 271 aa27.32■■□□□ 1.96
EFNA1-202ENST00000368407 SP100P23497 879 aaPredicted RBP27.32■■□□□ 1.96
EFNA1-202ENST00000368407 SLC30A9Q6PML9 568 aa27.32■■□□□ 1.96
EFNA1-202ENST00000368407 C3orf62Q6ZUJ4 267 aa27.32■■□□□ 1.96
EFNA1-202ENST00000368407 ADGRF2Q8IZF7 708 aa27.32■■□□□ 1.96
EFNA1-202ENST00000368407 PDIK1LQ8N165 341 aa27.32■■□□□ 1.96
EFNA1-202ENST00000368407 TSC22D3Q99576 134 aa27.32■■□□□ 1.96
EFNA1-202ENST00000368407 TMEM121Q9BTD3 319 aa27.32■■□□□ 1.96
EFNA1-202ENST00000368407 GPR62Q9BZJ7 368 aa27.32■■□□□ 1.96
EFNA1-202ENST00000368407 KCNK13Q9HB14 408 aa27.32■■□□□ 1.96
EFNA1-202ENST00000368407 PNPLA8Q9NP80 782 aa27.32■■□□□ 1.96
EFNA1-202ENST00000368407 STRIP2Q9ULQ0 834 aa27.32■■□□□ 1.96
EFNA1-202ENST00000368407 CILPO75339 1184 aa27.31■■□□□ 1.96
EFNA1-202ENST00000368407 DLDP09622 509 aaKnown RBP27.31■■□□□ 1.96
EFNA1-202ENST00000368407 INCA1Q0VD86 236 aa27.31■■□□□ 1.96
EFNA1-202ENST00000368407 OSTM1Q86WC4 334 aa27.31■■□□□ 1.96
EFNA1-202ENST00000368407 FIBCD1Q8N539 461 aa27.31■■□□□ 1.96
EFNA1-202ENST00000368407 PPFIBP2Q8ND30 876 aa27.31■■□□□ 1.96
EFNA1-202ENST00000368407 SP7Q8TDD2 431 aaPredicted RBP27.31■■□□□ 1.96
EFNA1-202ENST00000368407 KLHL11Q9NVR0 708 aa27.31■■□□□ 1.96
EFNA1-202ENST00000368407 MT-ND3P03897 115 aa27.31■■□□□ 1.96
EFNA1-202ENST00000368407 MYOGP15173 224 aa27.31■■□□□ 1.96
EFNA1-202ENST00000368407 NDST1P52848 882 aa27.31■■□□□ 1.96
EFNA1-202ENST00000368407 RCN1Q15293 331 aa27.31■■□□□ 1.96
EFNA1-202ENST00000368407 ACSBG2Q5FVE4 666 aa27.31■■□□□ 1.96
EFNA1-202ENST00000368407 ZFYVE27Q5T4F4 411 aa27.31■■□□□ 1.96
EFNA1-202ENST00000368407 DCUN1D2Q6PH85 259 aa27.31■■□□□ 1.96
EFNA1-202ENST00000368407 LRRC74BQ6ZQY2 392 aa27.31■■□□□ 1.96
EFNA1-202ENST00000368407 SH2D5Q6ZV89 423 aa27.31■■□□□ 1.96
EFNA1-202ENST00000368407 DPH6Q7L8W6 267 aa27.31■■□□□ 1.96
EFNA1-202ENST00000368407 COLGALT1Q8NBJ5 622 aa27.31■■□□□ 1.96
EFNA1-202ENST00000368407 OR6B3Q8NGW1 331 aa27.31■■□□□ 1.96
EFNA1-202ENST00000368407 MCUR1Q96AQ8 359 aa27.31■■□□□ 1.96
EFNA1-202ENST00000368407 ZNF558Q96NG5 402 aa27.31■■□□□ 1.96
EFNA1-202ENST00000368407 FRMD8Q9BZ67 464 aaPredicted RBP27.31■■□□□ 1.96
EFNA1-202ENST00000368407 MKS1Q9NXB0 559 aa27.31■■□□□ 1.96
EFNA1-202ENST00000368407 SCOCQ9UIL1 159 aa27.31■■□□□ 1.96
EFNA1-202ENST00000368407 BARX2Q9UMQ3 279 aaPredicted RBP27.31■■□□□ 1.96
EFNA1-202ENST00000368407 NUMBLQ9Y6R0 609 aa27.31■■□□□ 1.96
EFNA1-202ENST00000368407 H0Y3Z8 333 aa27.3■■□□□ 1.96
EFNA1-202ENST00000368407 LPXNO60711 386 aa27.3■■□□□ 1.96
EFNA1-202ENST00000368407 TCF4P15884 667 aa27.3■■□□□ 1.96
EFNA1-202ENST00000368407 YWHAEP62258 255 aaKnown RBP27.3■■□□□ 1.96
EFNA1-202ENST00000368407 ROR2Q01974 943 aaKnown RBP27.3■■□□□ 1.96
EFNA1-202ENST00000368407 TMEM154Q6P9G4 183 aa27.3■■□□□ 1.96
EFNA1-202ENST00000368407 RFWD3Q6PCD5 774 aa27.3■■□□□ 1.96
EFNA1-202ENST00000368407 PALM2Q8IXS6 379 aa27.3■■□□□ 1.96
EFNA1-202ENST00000368407 FBXO36Q8NEA4 188 aa27.3■■□□□ 1.96
EFNA1-202ENST00000368407 SLC44A1Q8WWI5 657 aa27.3■■□□□ 1.96
EFNA1-202ENST00000368407 MCEEQ96PE7 176 aa27.3■■□□□ 1.96
EFNA1-202ENST00000368407 SYT15Q9BQS2 421 aa27.3■■□□□ 1.96
EFNA1-202ENST00000368407 WDR83Q9BRX9 315 aaKnown RBP27.3■■□□□ 1.96
EFNA1-202ENST00000368407 TMEM120AQ9BXJ8 343 aa27.3■■□□□ 1.96
EFNA1-202ENST00000368407 ELOVL4Q9GZR5 314 aa27.3■■□□□ 1.96
EFNA1-202ENST00000368407 F8VP50 259 aa27.29■■□□□ 1.96
EFNA1-202ENST00000368407 ODC1P11926 461 aa27.29■■□□□ 1.96
EFNA1-202ENST00000368407 LAG3P18627 525 aa27.29■■□□□ 1.96
EFNA1-202ENST00000368407 PAX3P23760 479 aa27.29■■□□□ 1.96
EFNA1-202ENST00000368407 LMO2P25791 158 aa27.29■■□□□ 1.96
EFNA1-202ENST00000368407 SSTR1P30872 391 aa27.29■■□□□ 1.96
EFNA1-202ENST00000368407 TBCCQ15814 346 aa27.29■■□□□ 1.96
EFNA1-202ENST00000368407 FNBP1LQ5T0N5 605 aa27.29■■□□□ 1.96
EFNA1-202ENST00000368407 FUT10Q6P4F1 479 aa27.29■■□□□ 1.96
EFNA1-202ENST00000368407 ANKMY2Q8IV38 441 aa27.29■■□□□ 1.96
EFNA1-202ENST00000368407 RAB3IL1Q8TBN0 382 aa27.29■■□□□ 1.96
EFNA1-202ENST00000368407 IGSF21Q96ID5 467 aa27.29■■□□□ 1.96
EFNA1-202ENST00000368407 KCNK4Q9NYG8 393 aa27.29■■□□□ 1.96
EFNA1-202ENST00000368407 PDE4DIPQ5VU43 2346 aa27.29■■□□□ 1.96
EFNA1-202ENST00000368407 OGDHQ02218 1023 aa27.29■■□□□ 1.96
EFNA1-202ENST00000368407 RBBP5Q15291 538 aaKnown RBP27.29■■□□□ 1.96
EFNA1-202ENST00000368407 OR52E8Q6IFG1 317 aa27.29■■□□□ 1.96
EFNA1-202ENST00000368407 VPS52Q8N1B4 723 aa27.29■■□□□ 1.96
EFNA1-202ENST00000368407 SLC39A11Q8N1S5 342 aa27.29■■□□□ 1.96
EFNA1-202ENST00000368407 STMN2Q93045 179 aa27.29■■□□□ 1.96
EFNA1-202ENST00000368407 B3GALT6Q96L58 329 aa27.29■■□□□ 1.96
EFNA1-202ENST00000368407 NR1H4Q96RI1 486 aaPredicted RBP27.29■■□□□ 1.96
EFNA1-202ENST00000368407 DDX43Q9NXZ2 648 aaKnown RBP27.29■■□□□ 1.96
EFNA1-202ENST00000368407 SLC17A7Q9P2U7 560 aa27.29■■□□□ 1.96
EFNA1-202ENST00000368407 DCTN4Q9UJW0 460 aa27.29■■□□□ 1.96
EFNA1-202ENST00000368407 ANGPTL2Q9UKU9 493 aa27.29■■□□□ 1.96
EFNA1-202ENST00000368407 CFAP69A5D8W1 941 aa27.28■■□□□ 1.96
EFNA1-202ENST00000368407 IFNB1P01574 187 aa27.28■■□□□ 1.96
EFNA1-202ENST00000368407 PDGFRBP09619 1106 aa27.28■■□□□ 1.96
EFNA1-202ENST00000368407 ESRRAP11474 423 aaPredicted RBP27.28■■□□□ 1.96
EFNA1-202ENST00000368407 WARSP23381 471 aaKnown RBP27.28■■□□□ 1.96
EFNA1-202ENST00000368407 TKTP29401 623 aaKnown RBP27.28■■□□□ 1.96
EFNA1-202ENST00000368407 RPL22P35268 128 aaKnown RBP27.28■■□□□ 1.96
EFNA1-202ENST00000368407 PEX19P40855 299 aa27.28■■□□□ 1.96
EFNA1-202ENST00000368407 PLCB3Q01970 1234 aa27.28■■□□□ 1.96
EFNA1-202ENST00000368407 SLC25A11Q02978 314 aaKnown RBP27.28■■□□□ 1.96
EFNA1-202ENST00000368407 HP1BP3Q5SSJ5 553 aaPredicted RBP27.28■■□□□ 1.96
EFNA1-202ENST00000368407 GALNT15Q8N3T1 639 aa27.28■■□□□ 1.96
EFNA1-202ENST00000368407 ACTL9Q8TC94 416 aa27.28■■□□□ 1.96
EFNA1-202ENST00000368407 TEKT4Q8WW24 435 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms