RNA–Protein interactions for RNA: ENST00000368300.8

LMNA-206, Transcript of lamin A/C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNA, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-206ENST00000368300 ZNF487B1APH4 448 aa12.67□□□□□ -0.38
LMNA-206ENST00000368300 UPP2O95045 317 aa12.67□□□□□ -0.38
LMNA-206ENST00000368300 APOEP02649 317 aa12.67□□□□□ -0.38
LMNA-206ENST00000368300 SRGAP2BP0DMP2 458 aa12.67□□□□□ -0.38
LMNA-206ENST00000368300 MGAT1P26572 445 aa12.67□□□□□ -0.38
LMNA-206ENST00000368300 TM4SF4P48230 202 aa12.67□□□□□ -0.38
LMNA-206ENST00000368300 TPI1P60174 286 aa12.67□□□□□ -0.38
LMNA-206ENST00000368300 ITGA7Q13683 1181 aa12.67□□□□□ -0.38
LMNA-206ENST00000368300 DPYSQ14117 519 aa12.67□□□□□ -0.38
LMNA-206ENST00000368300 SDHAF4Q5VUM1 108 aa12.67□□□□□ -0.38
LMNA-206ENST00000368300 BNIPLQ7Z465 357 aa12.67□□□□□ -0.38
LMNA-206ENST00000368300 MRPL10Q7Z7H8 261 aaKnown RBP12.67□□□□□ -0.38
LMNA-206ENST00000368300 TBC1D1Q86TI0 1168 aaPredicted RBP12.67□□□□□ -0.38
LMNA-206ENST00000368300 SLC26A11Q86WA9 606 aa12.67□□□□□ -0.38
LMNA-206ENST00000368300 KIF2BQ8N4N8 673 aa12.67□□□□□ -0.38
LMNA-206ENST00000368300 MCUQ8NE86 351 aa12.67□□□□□ -0.38
LMNA-206ENST00000368300 SMARCD1Q96GM5 515 aa12.67□□□□□ -0.38
LMNA-206ENST00000368300 COLEC11Q9BWP8 271 aa12.67□□□□□ -0.38
LMNA-206ENST00000368300 TKTL2Q9H0I9 626 aa12.67□□□□□ -0.38
LMNA-206ENST00000368300 PPCSQ9HAB8 311 aa12.67□□□□□ -0.38
LMNA-206ENST00000368300 CNGB3Q9NQW8 809 aa12.67□□□□□ -0.38
LMNA-206ENST00000368300 FETUBQ9UGM5 382 aa12.67□□□□□ -0.38
LMNA-206ENST00000368300 TTC3P53804 2025 aa12.67□□□□□ -0.38
LMNA-206ENST00000368300 ODC1P11926 461 aa12.67□□□□□ -0.38
LMNA-206ENST00000368300 NEFHP12036 1026 aa12.67□□□□□ -0.38
LMNA-206ENST00000368300 PCSK1P29120 753 aa12.67□□□□□ -0.38
LMNA-206ENST00000368300 MAGEA6P43360 314 aa12.67□□□□□ -0.38
LMNA-206ENST00000368300 SEMA5AQ13591 1074 aa12.67□□□□□ -0.38
LMNA-206ENST00000368300 OTOAQ7RTW8 1153 aa12.67□□□□□ -0.38
LMNA-206ENST00000368300 ZNF280BQ86YH2 543 aa12.67□□□□□ -0.38
LMNA-206ENST00000368300 ANKLE1Q8NAG6 615 aa12.67□□□□□ -0.38
LMNA-206ENST00000368300 PGBD4Q96DM1 585 aa12.67□□□□□ -0.38
LMNA-206ENST00000368300 ZCWPW1Q9H0M4 648 aa12.67□□□□□ -0.38
LMNA-206ENST00000368300 WDCPQ9H6R7 721 aa12.67□□□□□ -0.38
LMNA-206ENST00000368300 DCTN4Q9UJW0 460 aa12.67□□□□□ -0.38
LMNA-206ENST00000368300 FBXW11Q9UKB1 542 aa12.67□□□□□ -0.38
LMNA-206ENST00000368300 DCLK1O15075 740 aa12.67□□□□□ -0.38
LMNA-206ENST00000368300 RPL9P32969 192 aaKnown RBP12.67□□□□□ -0.38
LMNA-206ENST00000368300 MAGEA3P43357 314 aa12.67□□□□□ -0.38
LMNA-206ENST00000368300 RAB41Q5JT25 222 aa12.67□□□□□ -0.38
LMNA-206ENST00000368300 APOL2Q9BQE5 337 aa12.67□□□□□ -0.38
LMNA-206ENST00000368300 MECRQ9BV79 373 aa12.67□□□□□ -0.38
LMNA-206ENST00000368300 NPHS2Q9NP85 383 aa12.67□□□□□ -0.38
LMNA-206ENST00000368300 NUP205Q92621 2012 aa12.66□□□□□ -0.38
LMNA-206ENST00000368300 EDF1O60869 148 aaKnown RBP12.66□□□□□ -0.38
LMNA-206ENST00000368300 FBXO21O94952 628 aa12.66□□□□□ -0.38
LMNA-206ENST00000368300 ZWINTO95229 277 aa12.66□□□□□ -0.38
LMNA-206ENST00000368300 EPHB2P29323 1055 aa12.66□□□□□ -0.38
LMNA-206ENST00000368300 IRX4P78413 519 aa12.66□□□□□ -0.38
LMNA-206ENST00000368300 PDK1Q15118 436 aa12.66□□□□□ -0.38
LMNA-206ENST00000368300 PRKD1Q15139 912 aaPredicted RBP12.66□□□□□ -0.38
LMNA-206ENST00000368300 OVOS1Q6IE37 1185 aa12.66□□□□□ -0.38
LMNA-206ENST00000368300 CCSAPQ6IQ19 270 aaPredicted RBP12.66□□□□□ -0.38
LMNA-206ENST00000368300 SH2D5Q6ZV89 423 aa12.66□□□□□ -0.38
LMNA-206ENST00000368300 RTN4RL1Q86UN2 441 aaPredicted RBP12.66□□□□□ -0.38
LMNA-206ENST00000368300 TAC4Q86UU9 113 aa12.66□□□□□ -0.38
LMNA-206ENST00000368300 ZNF276Q8N554 614 aa12.66□□□□□ -0.38
LMNA-206ENST00000368300 ECT2Q9H8V3 914 aa12.66□□□□□ -0.38
LMNA-206ENST00000368300 UBP1Q9NZI7 540 aa12.66□□□□□ -0.38
LMNA-206ENST00000368300 KLHL8Q9P2G9 620 aaPredicted RBP12.66□□□□□ -0.38
LMNA-206ENST00000368300 OR12D3Q9UGF7 316 aa12.66□□□□□ -0.38
LMNA-206ENST00000368300 SLC12A4Q9UP95 1085 aa12.66□□□□□ -0.38
LMNA-206ENST00000368300 ZNF638Q14966 1978 aaKnown RBP12.66□□□□□ -0.38
LMNA-206ENST00000368300 CHUKO15111 745 aa12.66□□□□□ -0.38
LMNA-206ENST00000368300 ZNF623O75123 536 aa12.66□□□□□ -0.38
LMNA-206ENST00000368300 TSHRP16473 764 aa12.66□□□□□ -0.38
LMNA-206ENST00000368300 GMPRP36959 345 aa12.66□□□□□ -0.38
LMNA-206ENST00000368300 IRX1P78414 480 aaPredicted RBP12.66□□□□□ -0.38
LMNA-206ENST00000368300 DSC3Q14574 896 aa12.66□□□□□ -0.38
LMNA-206ENST00000368300 INTS6LQ5JSJ4 861 aaKnown RBP12.66□□□□□ -0.38
LMNA-206ENST00000368300 METTL23Q86XA0 190 aa12.66□□□□□ -0.38
LMNA-206ENST00000368300 ARMC2Q8NEN0 867 aa12.66□□□□□ -0.38
LMNA-206ENST00000368300 KLHDC9Q8NEP7 349 aa12.66□□□□□ -0.38
LMNA-206ENST00000368300 RSPH1Q8WYR4 309 aa12.66□□□□□ -0.38
LMNA-206ENST00000368300 YIPF3Q9GZM5 350 aa12.66□□□□□ -0.38
LMNA-206ENST00000368300 ETAA1Q9NY74 926 aa12.66□□□□□ -0.38
LMNA-206ENST00000368300 E2F8A0AVK6 867 aa12.65□□□□□ -0.38
LMNA-206ENST00000368300 HMX2A2RU54 273 aa12.65□□□□□ -0.38
LMNA-206ENST00000368300 KLHL33A6NCF5 533 aa12.65□□□□□ -0.38
LMNA-206ENST00000368300 MSI1O43347 362 aaKnown RBP12.65□□□□□ -0.38
LMNA-206ENST00000368300 TPSB2P20231 275 aa12.65□□□□□ -0.38
LMNA-206ENST00000368300 BGNP21810 368 aa12.65□□□□□ -0.38
LMNA-206ENST00000368300 KCNJ2P63252 427 aa12.65□□□□□ -0.38
LMNA-206ENST00000368300 TPSAB1Q15661 275 aa12.65□□□□□ -0.38
LMNA-206ENST00000368300 TTC39BQ5VTQ0 682 aaPredicted RBP12.65□□□□□ -0.38
LMNA-206ENST00000368300 RWDD4Q6NW29 188 aaKnown RBP12.65□□□□□ -0.38
LMNA-206ENST00000368300 GSDMBQ8TAX9 411 aa12.65□□□□□ -0.38
LMNA-206ENST00000368300 MICAL1Q8TDZ2 1067 aa12.65□□□□□ -0.38
LMNA-206ENST00000368300 STAMBPL1Q96FJ0 436 aa12.65□□□□□ -0.38
LMNA-206ENST00000368300 OXNAD1Q96HP4 312 aaPredicted RBP12.65□□□□□ -0.38
LMNA-206ENST00000368300 SRPK1Q96SB4 655 aaKnown RBP12.65□□□□□ -0.38
LMNA-206ENST00000368300 RCOR3Q9P2K3 495 aaPredicted RBP12.65□□□□□ -0.38
LMNA-206ENST00000368300 SFMBT1Q9UHJ3 866 aa12.65□□□□□ -0.38
LMNA-206ENST00000368300 PRG3Q9Y2Y8 225 aaPredicted RBP12.65□□□□□ -0.38
LMNA-206ENST00000368300 PTCH2Q9Y6C5 1203 aa12.65□□□□□ -0.38
LMNA-206ENST00000368300 TRPM7Q96QT4 1865 aa12.65□□□□□ -0.38
LMNA-206ENST00000368300 SPAG6O75602 509 aa12.65□□□□□ -0.38
LMNA-206ENST00000368300 DDHD2O94830 711 aa12.65□□□□□ -0.38
LMNA-206ENST00000368300 LRIG2O94898 1065 aa12.65□□□□□ -0.38
LMNA-206ENST00000368300 SNRPAP09012 282 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms