RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 CPNE1Q99829 537 aa14.69□□□□□ -0.06
CD48-201ENST00000368045 EIF2AQ9BY44 585 aaKnown RBP14.69□□□□□ -0.06
CD48-201ENST00000368045 C20orf27Q9GZN8 174 aa14.69□□□□□ -0.06
CD48-201ENST00000368045 CXCL16Q9H2A7 254 aa14.69□□□□□ -0.06
CD48-201ENST00000368045 ZNF395Q9H8N7 513 aaPredicted RBP14.69□□□□□ -0.06
CD48-201ENST00000368045 CITO14578 2027 aa14.69□□□□□ -0.06
CD48-201ENST00000368045 GPR32O75388 356 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 DDNO94850 711 aaPredicted RBP14.68□□□□□ -0.06
CD48-201ENST00000368045 POLBP06746 335 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 ITGA2BP08514 1039 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 PDGFRBP09619 1106 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 KITP10721 976 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 DARSP14868 501 aaKnown RBP14.68□□□□□ -0.06
CD48-201ENST00000368045 MX2P20592 715 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 WARSP23381 471 aaKnown RBP14.68□□□□□ -0.06
CD48-201ENST00000368045 CPA2P48052 419 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 TAF6P49848 677 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 ALDH18A1P54886 795 aaKnown RBP14.68□□□□□ -0.06
CD48-201ENST00000368045 TUBB3Q13509 450 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 RCN2Q14257 317 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 CCDC153Q494R4 210 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 DUSP28Q4G0W2 176 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 XKR4Q5GH76 650 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 RABGAP1LQ5R372 815 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 FAM182AQ5T1J6 154 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 RASSF3Q86WH2 238 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 FAM131BQ86XD5 332 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 MYLK4Q86YV6 388 aaPredicted RBP14.68□□□□□ -0.06
CD48-201ENST00000368045 DEFB106AQ8N104 65 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 NRG4Q8WWG1 115 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 KCTD13Q8WZ19 329 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 SLC9A7Q96T83 725 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 LPIN3Q9BQK8 851 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 VCXQ9H320 206 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 TXNDC16Q9P2K2 825 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 MARCOQ9UEW3 520 aaPredicted RBP14.68□□□□□ -0.06
CD48-201ENST00000368045 STAP1Q9ULZ2 295 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 SOX13Q9UN79 622 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 APOBEC2Q9Y235 224 aaKnown RBP14.68□□□□□ -0.06
CD48-201ENST00000368045 DNAJC16Q9Y2G8 782 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 MCM3APO60318 1980 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 POLR2AP24928 1970 aaKnown RBP14.68□□□□□ -0.06
CD48-201ENST00000368045 PRR5-ARHGAP8B1AHC4 643 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 FKBP6O75344 327 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 MAGEA12P43365 314 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 SESN2P58004 480 aaPredicted RBP14.68□□□□□ -0.06
CD48-201ENST00000368045 RPL10AP62906 217 aaKnown RBP14.68□□□□□ -0.06
CD48-201ENST00000368045 AP2B1P63010 937 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 ARHGAP8P85298 464 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 PDE1BQ01064 536 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 KDSRQ06136 332 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 IFRD2Q12894 506 aaPredicted RBP14.68□□□□□ -0.06
CD48-201ENST00000368045 DPYSQ14117 519 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 PCLAFQ15004 111 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 TMCO4Q5TGY1 634 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 AAGABQ6PD74 315 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 ZCCHC23Q6ZST2 131 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 PYROXD2Q8N2H3 581 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 TOP6BLQ8N6T0 577 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 SLC2A13Q96QE2 648 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 NPY6RQ99463 290 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 DUSP16Q9BY84 665 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 MAGEB5Q9BZ81 275 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 BRD8Q9H0E9 1235 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 MFHAS1Q9Y4C4 1052 aa14.68□□□□□ -0.06
CD48-201ENST00000368045 SMIM28A0A1B0GU29 152 aa14.67□□□□□ -0.06
CD48-201ENST00000368045 SMIM35A0A1B0GVV1 85 aa14.67□□□□□ -0.06
CD48-201ENST00000368045 NCAM2O15394 837 aa14.67□□□□□ -0.06
CD48-201ENST00000368045 HUS1O60921 280 aa14.67□□□□□ -0.06
CD48-201ENST00000368045 SNAI1O95863 264 aaPredicted RBP14.67□□□□□ -0.06
CD48-201ENST00000368045 LMO2P25791 158 aa14.67□□□□□ -0.06
CD48-201ENST00000368045 PSMB4P28070 264 aa14.67□□□□□ -0.06
CD48-201ENST00000368045 HARS2P49590 506 aaKnown RBP14.67□□□□□ -0.06
CD48-201ENST00000368045 GSTA3Q16772 222 aa14.67□□□□□ -0.06
CD48-201ENST00000368045 C16orf46Q6P387 395 aa14.67□□□□□ -0.06
CD48-201ENST00000368045 RIPOR1Q6ZS17 1223 aa14.67□□□□□ -0.06
CD48-201ENST00000368045 MOB2Q70IA6 237 aa14.67□□□□□ -0.06
CD48-201ENST00000368045 ADGRG6Q86SQ4 1221 aa14.67□□□□□ -0.06
CD48-201ENST00000368045 OR6J1Q8NGC5 347 aa14.67□□□□□ -0.06
CD48-201ENST00000368045 CERS2Q96G23 380 aa14.67□□□□□ -0.06
CD48-201ENST00000368045 ZNF778Q96MU6 729 aa14.67□□□□□ -0.06
CD48-201ENST00000368045 THTPAQ9BU02 230 aa14.67□□□□□ -0.06
CD48-201ENST00000368045 NXF3Q9H4D5 531 aaKnown RBP14.67□□□□□ -0.06
CD48-201ENST00000368045 LRRC40Q9H9A6 602 aa14.67□□□□□ -0.06
CD48-201ENST00000368045 SYBUQ9NX95 663 aa14.67□□□□□ -0.06
CD48-201ENST00000368045 SLC45A1Q9Y2W3 748 aa14.67□□□□□ -0.06
CD48-201ENST00000368045 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.67□□□□□ -0.06
CD48-201ENST00000368045 DICER1Q9UPY3 1922 aaKnown RBP14.67□□□□□ -0.06
CD48-201ENST00000368045 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.66□□□□□ -0.06
CD48-201ENST00000368045 ERI2A8K979 691 aaKnown RBP14.66□□□□□ -0.06
CD48-201ENST00000368045 SPTLC1O15269 473 aa14.66□□□□□ -0.06
CD48-201ENST00000368045 MTSS1O43312 755 aa14.66□□□□□ -0.06
CD48-201ENST00000368045 H2AFYO75367 372 aaKnown RBP14.66□□□□□ -0.06
CD48-201ENST00000368045 NEBLO76041 1014 aa14.66□□□□□ -0.06
CD48-201ENST00000368045 ANPEPP15144 967 aa14.66□□□□□ -0.06
CD48-201ENST00000368045 CDC25CP30307 473 aa14.66□□□□□ -0.06
CD48-201ENST00000368045 SPRP35270 261 aaPredicted RBP14.66□□□□□ -0.06
CD48-201ENST00000368045 CPOXP36551 454 aa14.66□□□□□ -0.06
CD48-201ENST00000368045 HCAR3P49019 387 aa14.66□□□□□ -0.06
CD48-201ENST00000368045 SERPINB8P50452 374 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms