RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 HIDE1A8MVS5 230 aa11.89□□□□□ -0.51
USF1-201ENST00000368019 APOC4-APOC2K7ER74 178 aa11.89□□□□□ -0.51
USF1-201ENST00000368019 PDLIM1O00151 329 aa11.89□□□□□ -0.51
USF1-201ENST00000368019 FCHO1O14526 889 aa11.89□□□□□ -0.51
USF1-201ENST00000368019 TRDMT1O14717 391 aaKnown RBP11.89□□□□□ -0.51
USF1-201ENST00000368019 CAPN9O14815 690 aa11.89□□□□□ -0.51
USF1-201ENST00000368019 BIRC5O15392 142 aa11.89□□□□□ -0.51
USF1-201ENST00000368019 HOXA2O43364 376 aa11.89□□□□□ -0.51
USF1-201ENST00000368019 SMIM24O75264 130 aa11.89□□□□□ -0.51
USF1-201ENST00000368019 CIB2O75838 187 aa11.89□□□□□ -0.51
USF1-201ENST00000368019 ASS1P00966 412 aaKnown RBP11.89□□□□□ -0.51
USF1-201ENST00000368019 APOC2P02655 101 aa11.89□□□□□ -0.51
USF1-201ENST00000368019 OATP04181 439 aa11.89□□□□□ -0.51
USF1-201ENST00000368019 DARSP14868 501 aaKnown RBP11.89□□□□□ -0.51
USF1-201ENST00000368019 RPL22P35268 128 aaKnown RBP11.89□□□□□ -0.51
USF1-201ENST00000368019 MAGEA6P43360 314 aa11.89□□□□□ -0.51
USF1-201ENST00000368019 SLC25A11Q02978 314 aaKnown RBP11.89□□□□□ -0.51
USF1-201ENST00000368019 ZBTB16Q05516 673 aa11.89□□□□□ -0.51
USF1-201ENST00000368019 ADCY1Q08828 1119 aa11.89□□□□□ -0.51
USF1-201ENST00000368019 TFDP1Q14186 410 aa11.89□□□□□ -0.51
USF1-201ENST00000368019 LLGL1Q15334 1064 aa11.89□□□□□ -0.51
USF1-201ENST00000368019 CLLU1OSQ5K130 101 aa11.89□□□□□ -0.51
USF1-201ENST00000368019 STXBP5Q5T5C0 1151 aa11.89□□□□□ -0.51
USF1-201ENST00000368019 IER5LQ5T953 404 aa11.89□□□□□ -0.51
USF1-201ENST00000368019 TTC39BQ5VTQ0 682 aaPredicted RBP11.89□□□□□ -0.51
USF1-201ENST00000368019 ANKRD54Q6NXT1 300 aa11.89□□□□□ -0.51
USF1-201ENST00000368019 DCUN1D2Q6PH85 259 aa11.89□□□□□ -0.51
USF1-201ENST00000368019 DSTYKQ6XUX3 929 aa11.89□□□□□ -0.51
USF1-201ENST00000368019 C3orf62Q6ZUJ4 267 aa11.89□□□□□ -0.51
USF1-201ENST00000368019 TRMT1LQ7Z2T5 733 aaKnown RBP11.89□□□□□ -0.51
USF1-201ENST00000368019 MYLK4Q86YV6 388 aaPredicted RBP11.89□□□□□ -0.51
USF1-201ENST00000368019 WDR49Q8IV35 697 aa11.89□□□□□ -0.51
USF1-201ENST00000368019 BRSK2Q8IWQ3 736 aa11.89□□□□□ -0.51
USF1-201ENST00000368019 LRRC71Q8N4P6 559 aa11.89□□□□□ -0.51
USF1-201ENST00000368019 FBXO36Q8NEA4 188 aa11.89□□□□□ -0.51
USF1-201ENST00000368019 PRSS33Q8NF86 280 aa11.89□□□□□ -0.51
USF1-201ENST00000368019 PIP4K2CQ8TBX8 421 aa11.89□□□□□ -0.51
USF1-201ENST00000368019 ACTL9Q8TC94 416 aa11.89□□□□□ -0.51
USF1-201ENST00000368019 SCG3Q8WXD2 468 aaKnown RBP11.89□□□□□ -0.51
USF1-201ENST00000368019 RSAD2Q8WXG1 361 aa11.89□□□□□ -0.51
USF1-201ENST00000368019 NCSTNQ92542 709 aa11.89□□□□□ -0.51
USF1-201ENST00000368019 PBXIP1Q96AQ6 731 aa11.89□□□□□ -0.51
USF1-201ENST00000368019 MTBPQ96DY7 904 aa11.89□□□□□ -0.51
USF1-201ENST00000368019 APOBEC3GQ9HC16 384 aaKnown RBP11.89□□□□□ -0.51
USF1-201ENST00000368019 NGRNQ9NPE2 291 aaKnown RBP11.89□□□□□ -0.51
USF1-201ENST00000368019 ZDHHC7Q9NXF8 308 aa11.89□□□□□ -0.51
USF1-201ENST00000368019 AKT3Q9Y243 479 aa11.89□□□□□ -0.51
USF1-201ENST00000368019 IKBKGQ9Y6K9 419 aa11.89□□□□□ -0.51
USF1-201ENST00000368019 USP34Q70CQ2 3546 aa11.89□□□□□ -0.51
USF1-201ENST00000368019 CNTNAP2Q9UHC6 1331 aa11.88□□□□□ -0.51
USF1-201ENST00000368019 CAPN14A8MX76 684 aa11.88□□□□□ -0.51
USF1-201ENST00000368019 H0Y3Z8 333 aa11.88□□□□□ -0.51
USF1-201ENST00000368019 I3L4J1 428 aa11.88□□□□□ -0.51
USF1-201ENST00000368019 TM7SF2O76062 418 aa11.88□□□□□ -0.51
USF1-201ENST00000368019 ENDOD1O94919 500 aa11.88□□□□□ -0.51
USF1-201ENST00000368019 EOMESO95936 686 aa11.88□□□□□ -0.51
USF1-201ENST00000368019 INHBAP08476 426 aa11.88□□□□□ -0.51
USF1-201ENST00000368019 ZSCAN5DPP0CG00 497 aa11.88□□□□□ -0.51
USF1-201ENST00000368019 CRABP2P29373 138 aa11.88□□□□□ -0.51
USF1-201ENST00000368019 SERPINB3P29508 390 aa11.88□□□□□ -0.51
USF1-201ENST00000368019 SSTR1P30872 391 aa11.88□□□□□ -0.51
USF1-201ENST00000368019 PPM1AP35813 382 aa11.88□□□□□ -0.51
USF1-201ENST00000368019 GJC1P36383 396 aa11.88□□□□□ -0.51
USF1-201ENST00000368019 PEX19P40855 299 aa11.88□□□□□ -0.51
USF1-201ENST00000368019 SERPINB4P48594 390 aa11.88□□□□□ -0.51
USF1-201ENST00000368019 RAB27AP51159 221 aa11.88□□□□□ -0.51
USF1-201ENST00000368019 RPL7AP62424 266 aaKnown RBP11.88□□□□□ -0.51
USF1-201ENST00000368019 OTUD4Q01804 1114 aaKnown RBP11.88□□□□□ -0.51
USF1-201ENST00000368019 SIGLEC14Q08ET2 396 aa11.88□□□□□ -0.51
USF1-201ENST00000368019 HNRNPDQ14103 355 aaKnown RBP11.88□□□□□ -0.51
USF1-201ENST00000368019 RCN2Q14257 317 aa11.88□□□□□ -0.51
USF1-201ENST00000368019 PDCD2Q16342 344 aaPredicted RBP11.88□□□□□ -0.51
USF1-201ENST00000368019 XKR3Q5GH77 459 aa11.88□□□□□ -0.51
USF1-201ENST00000368019 PLPP4Q5VZY2 271 aa11.88□□□□□ -0.51
USF1-201ENST00000368019 KAZNQ674X7 775 aa11.88□□□□□ -0.51
USF1-201ENST00000368019 RFWD3Q6PCD5 774 aa11.88□□□□□ -0.51
USF1-201ENST00000368019 ZPBP2Q6X784 338 aa11.88□□□□□ -0.51
USF1-201ENST00000368019 RHPN2Q8IUC4 686 aa11.88□□□□□ -0.51
USF1-201ENST00000368019 LRRC43Q8N309 656 aa11.88□□□□□ -0.51
USF1-201ENST00000368019 NRG4Q8WWG1 115 aa11.88□□□□□ -0.51
USF1-201ENST00000368019 ASIC4Q96FT7 647 aa11.88□□□□□ -0.51
USF1-201ENST00000368019 ZNF558Q96NG5 402 aa11.88□□□□□ -0.51
USF1-201ENST00000368019 OLFM3Q96PB7 478 aa11.88□□□□□ -0.51
USF1-201ENST00000368019 MCEEQ96PE7 176 aa11.88□□□□□ -0.51
USF1-201ENST00000368019 TCF25Q9BQ70 676 aa11.88□□□□□ -0.51
USF1-201ENST00000368019 POLR3FQ9H1D9 316 aaPredicted RBP11.88□□□□□ -0.51
USF1-201ENST00000368019 VCX3BQ9H321 246 aa11.88□□□□□ -0.51
USF1-201ENST00000368019 RSAD1Q9HA92 442 aa11.88□□□□□ -0.51
USF1-201ENST00000368019 CYP26B1Q9NR63 512 aa11.88□□□□□ -0.51
USF1-201ENST00000368019 NRBP2Q9NSY0 501 aa11.88□□□□□ -0.51
USF1-201ENST00000368019 ETAA1Q9NY74 926 aa11.88□□□□□ -0.51
USF1-201ENST00000368019 RBAKQ9NYW8 714 aaPredicted RBP11.88□□□□□ -0.51
USF1-201ENST00000368019 SPG21Q9NZD8 308 aa11.88□□□□□ -0.51
USF1-201ENST00000368019 DLGAP2Q9P1A6 1054 aa11.88□□□□□ -0.51
USF1-201ENST00000368019 SLC17A7Q9P2U7 560 aa11.88□□□□□ -0.51
USF1-201ENST00000368019 TAGLN3Q9UI15 199 aa11.88□□□□□ -0.51
USF1-201ENST00000368019 TEX264Q9Y6I9 313 aa11.88□□□□□ -0.51
USF1-201ENST00000368019 A0A0B4J269 797 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 IGKV6-21A0A0C4DH24 114 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 A0A0G2JND7 137 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms