RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 SNX9Q9Y5X1 595 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 UBA1P22314 1058 aaKnown RBP7.48□□□□□ -1.21
VTA1-202ENST00000367630 YY1P25490 414 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 RPL14P50914 215 aaKnown RBP7.48□□□□□ -1.21
VTA1-202ENST00000367630 CBLBQ13191 982 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 ZNF235Q14590 738 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 CDO1Q16878 200 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 RALGPS1Q5JS13 557 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 MTDHQ86UE4 582 aaKnown RBP7.48□□□□□ -1.21
VTA1-202ENST00000367630 ARID3BQ8IVW6 561 aaPredicted RBP7.48□□□□□ -1.21
VTA1-202ENST00000367630 C2orf15Q8WU43 125 aaKnown RBP7.48□□□□□ -1.21
VTA1-202ENST00000367630 TSPEARQ8WU66 669 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 ROPN1LQ96C74 230 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.48□□□□□ -1.212e-6■■■□□ 17.4
VTA1-202ENST00000367630 CORO2BQ9UQ03 480 aa7.48□□□□□ -1.21
VTA1-202ENST00000367630 ATMINO43313 823 aaPredicted RBP7.47□□□□□ -1.21
VTA1-202ENST00000367630 MAGEA6P43360 314 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 KIF19Q2TAC6 998 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 FASTKD1Q53R41 847 aaKnown RBP7.47□□□□□ -1.21
VTA1-202ENST00000367630 RHBDF2Q6PJF5 856 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 PLEKHH3Q7Z736 793 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 PDGFCQ9NRA1 345 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 TUBA8Q9NY65 449 aaPredicted RBP7.47□□□□□ -1.21
VTA1-202ENST00000367630 GTSE1Q9NYZ3 720 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 TSPAN16Q9UKR8 245 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 COG5Q9UP83 839 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 NFKB1P19838 968 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 ME2P23368 584 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 MATKP42679 507 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 INCA1Q0VD86 236 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 CAPSQ13938 189 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 BSPRYQ5W0U4 402 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 XYLT1Q86Y38 959 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 MPP5Q8N3R9 675 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 CMASQ8NFW8 434 aaPredicted RBP7.47□□□□□ -1.21
VTA1-202ENST00000367630 FZD8Q9H461 694 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 TFR2Q9UP52 801 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 CLEC11AQ9Y240 323 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 GIT1Q9Y2X7 761 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 RGSL1A5PLK6 1076 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 PI4K2BG5E9Z4 385 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 TRIM38O00635 465 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 WNT10BO00744 389 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 TARSP26639 723 aaKnown RBP7.47□□□□□ -1.21
VTA1-202ENST00000367630 ALDH18A1P54886 795 aaKnown RBP7.47□□□□□ -1.21
VTA1-202ENST00000367630 ITKQ08881 620 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 PKN2Q16513 984 aaKnown RBP7.47□□□□□ -1.21
VTA1-202ENST00000367630 FAXCQ5TGI0 409 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 SNX30Q5VWJ9 437 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 SPATA19Q7Z5L4 167 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 PROSER1Q86XN7 944 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 TDRD5Q8NAT2 981 aaKnown RBP7.47□□□□□ -1.21
VTA1-202ENST00000367630 SETD9Q8NE22 299 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 LMO3Q8TAP4 145 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 AGR3Q8TD06 166 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 BSNDQ8WZ55 320 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 NUSAP1Q9BXS6 441 aaKnown RBP7.47□□□□□ -1.21
VTA1-202ENST00000367630 ABCC13Q9NSE7 274 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 FAM196BA6NMK8 535 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 QSOX1O00391 747 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 CD3EAPO15446 510 aaKnown RBP7.47□□□□□ -1.21
VTA1-202ENST00000367630 KDM1AO60341 852 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 FARP2O94887 1054 aaPredicted RBP7.47□□□□□ -1.21
VTA1-202ENST00000367630 ATP5F1P24539 256 aaPredicted RBP7.47□□□□□ -1.21
VTA1-202ENST00000367630 AQP5P55064 265 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 SREBF2Q12772 1141 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 SLC14A2Q15849 920 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 SLC25A52Q3SY17 297 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 LIPMQ5VYY2 423 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 TWF2Q6IBS0 349 aaKnown RBP7.47□□□□□ -1.21
VTA1-202ENST00000367630 DHDDSQ86SQ9 333 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 COLGALT1Q8NBJ5 622 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 PHC3Q8NDX5 983 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 EMID1Q96A84 441 aaPredicted RBP7.47□□□□□ -1.21
VTA1-202ENST00000367630 CNOT11Q9UKZ1 510 aaKnown RBP7.47□□□□□ -1.21
VTA1-202ENST00000367630 WDR91A4D1P6 747 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 ARL1P40616 181 aaPredicted RBP7.47□□□□□ -1.21
VTA1-202ENST00000367630 RANBP1P43487 201 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 NR1H2P55055 460 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 TSPYL2Q9H2G4 693 aaPredicted RBP7.47□□□□□ -1.21
VTA1-202ENST00000367630 POPDC3Q9HBV1 291 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 HAO1Q9UJM8 370 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 LRFN2Q9ULH4 789 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 MYH4Q9Y623 1939 aa7.47□□□□□ -1.21
VTA1-202ENST00000367630 A0A087WXM4 84 aa7.46□□□□□ -1.21
VTA1-202ENST00000367630 TMEM247A6NEH6 219 aa7.46□□□□□ -1.21
VTA1-202ENST00000367630 ZSCAN5CA6NGD5 496 aaPredicted RBP7.46□□□□□ -1.21
VTA1-202ENST00000367630 SNAP91O60641 907 aa7.46□□□□□ -1.21
VTA1-202ENST00000367630 PSMC3P17980 439 aa7.46□□□□□ -1.21
VTA1-202ENST00000367630 DPYSL2Q16555 572 aa7.46□□□□□ -1.21
VTA1-202ENST00000367630 TTC27Q6P3X3 843 aa7.46□□□□□ -1.21
VTA1-202ENST00000367630 NKAPQ8N5F7 415 aaKnown RBP7.46□□□□□ -1.21
VTA1-202ENST00000367630 ZNF669Q96BR6 464 aaPredicted RBP7.46□□□□□ -1.21
VTA1-202ENST00000367630 CCDC138Q96M89 665 aa7.46□□□□□ -1.21
VTA1-202ENST00000367630 TBL1YQ9BQ87 522 aa7.46□□□□□ -1.21
VTA1-202ENST00000367630 THTPAQ9BU02 230 aa7.46□□□□□ -1.21
VTA1-202ENST00000367630 ATAD5Q96QE3 1844 aa7.46□□□□□ -1.21
VTA1-202ENST00000367630 NPPAP01160 153 aa7.46□□□□□ -1.21
VTA1-202ENST00000367630 PDGFRBP09619 1106 aa7.46□□□□□ -1.21
VTA1-202ENST00000367630 ANXA11P50995 505 aaKnown RBP7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms