RNA–Protein interactions for RNA: ENST00000367503.7

SHPRH-202, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5 BASIC

Gene SHPRH, Length 5,237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-202ENST00000367503 GPBP1L1Q9HC44 474 aaPredicted RBP12.54□□□□□ -0.4
SHPRH-202ENST00000367503 RGSL1A5PLK6 1076 aa12.54□□□□□ -0.4
SHPRH-202ENST00000367503 PCP4L1A6NKN8 68 aa12.54□□□□□ -0.4
SHPRH-202ENST00000367503 TRDMT1O14717 391 aaKnown RBP12.54□□□□□ -0.4
SHPRH-202ENST00000367503 CCNKO75909 580 aa12.54□□□□□ -0.4
SHPRH-202ENST00000367503 ZSCAN5DPP0CG00 497 aa12.54□□□□□ -0.4
SHPRH-202ENST00000367503 PSMC6P62333 389 aa12.54□□□□□ -0.4
SHPRH-202ENST00000367503 GCNT1Q02742 428 aa12.54□□□□□ -0.4
SHPRH-202ENST00000367503 GOLGA7BQ2TAP0 167 aa12.54□□□□□ -0.4
SHPRH-202ENST00000367503 LRRC55Q6ZSA7 311 aa12.54□□□□□ -0.4
SHPRH-202ENST00000367503 KDELC2Q7Z4H8 507 aa12.54□□□□□ -0.4
SHPRH-202ENST00000367503 IRF2BP1Q8IU81 584 aa12.54□□□□□ -0.4
SHPRH-202ENST00000367503 CITED4Q96RK1 184 aa12.54□□□□□ -0.4
SHPRH-202ENST00000367503 OLFM1Q99784 485 aa12.54□□□□□ -0.4
SHPRH-202ENST00000367503 LRRC40Q9H9A6 602 aa12.54□□□□□ -0.4
SHPRH-202ENST00000367503 CDV3Q9UKY7 258 aaKnown RBP12.54□□□□□ -0.4
SHPRH-202ENST00000367503 PIN4Q9Y237 131 aaKnown RBP12.54□□□□□ -0.4
SHPRH-202ENST00000367503 NDUFS3O75489 264 aa12.54□□□□□ -0.4
SHPRH-202ENST00000367503 PTPN7P35236 360 aa12.54□□□□□ -0.4
SHPRH-202ENST00000367503 ITGA7Q13683 1181 aa12.54□□□□□ -0.4
SHPRH-202ENST00000367503 CHST13Q8NET6 341 aa12.54□□□□□ -0.4
SHPRH-202ENST00000367503 LNX1Q8TBB1 728 aaPredicted RBP12.54□□□□□ -0.4
SHPRH-202ENST00000367503 SPOCK2Q92563 424 aa12.54□□□□□ -0.4
SHPRH-202ENST00000367503 ASIC4Q96FT7 647 aa12.54□□□□□ -0.4
SHPRH-202ENST00000367503 TCF12Q99081 682 aa12.54□□□□□ -0.4
SHPRH-202ENST00000367503 ROGDIQ9GZN7 287 aa12.54□□□□□ -0.4
SHPRH-202ENST00000367503 GPRC5DQ9NZD1 345 aa12.54□□□□□ -0.4
SHPRH-202ENST00000367503 AGLP35573 1532 aa12.54□□□□□ -0.4
SHPRH-202ENST00000367503 MARCKSL1P49006 195 aa12.54□□□□□ -0.4
SHPRH-202ENST00000367503 KIZQ2M2Z5 673 aa12.54□□□□□ -0.4
SHPRH-202ENST00000367503 C6orf183Q5T699 404 aa12.54□□□□□ -0.4
SHPRH-202ENST00000367503 SCARA3Q6AZY7 606 aa12.54□□□□□ -0.4
SHPRH-202ENST00000367503 SMIM5Q71RC9 77 aa12.54□□□□□ -0.4
SHPRH-202ENST00000367503 BBS7Q8IWZ6 715 aa12.54□□□□□ -0.4
SHPRH-202ENST00000367503 AMER2Q8N7J2 671 aa12.54□□□□□ -0.4
SHPRH-202ENST00000367503 EHD3Q9NZN3 535 aa12.54□□□□□ -0.4
SHPRH-202ENST00000367503 TJP2Q9UDY2 1190 aa12.54□□□□□ -0.4
SHPRH-202ENST00000367503 TNPO2O14787 897 aaKnown RBP12.53□□□□□ -0.4
SHPRH-202ENST00000367503 SIN3BO75182 1162 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 TBX10O75333 385 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 ANXA9O76027 345 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 BNC1Q01954 994 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 TAB1Q15750 504 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 KLHDC10Q6PID8 442 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 FASTKD5Q7L8L6 764 aaKnown RBP12.53□□□□□ -0.4
SHPRH-202ENST00000367503 EID3Q8N140 333 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 PDPRQ8NCN5 879 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 GMCL1P1Q8NEA9 526 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 RP9Q8TA86 221 aaKnown RBP12.53□□□□□ -0.4
SHPRH-202ENST00000367503 ASZ1Q8WWH4 475 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 TAMM41Q96BW9 452 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 MBOAT7Q96N66 472 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 CATSPERBQ9H7T0 1116 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 CYP4F12Q9HCS2 524 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 TAS2R14Q9NYV8 317 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.53□□□□□ -0.4
SHPRH-202ENST00000367503 ZNF221Q9UK13 617 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 ACOT9Q9Y305 439 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 HS6ST1O60243 411 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 TOMM70O94826 608 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 PARNO95453 639 aaKnown RBP12.53□□□□□ -0.4
SHPRH-202ENST00000367503 GRIA3P42263 894 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 EPS8Q12929 822 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 DDR2Q16832 855 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 MFSD7Q6UXD7 560 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 ZDHHC13Q8IUH4 622 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 UNC45BQ8IWX7 931 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 SNX31Q8N9S9 440 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 ZSWIM2Q8NEG5 633 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 ERVK-5Q9HDB9 667 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 ITGA11Q9UKX5 1188 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 SEMA3DO95025 777 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 AMPD1P23109 780 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 LSM3P62310 102 aaKnown RBP12.53□□□□□ -0.4
SHPRH-202ENST00000367503 ARHGEF6Q15052 776 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 TRIP4Q15650 581 aaPredicted RBP12.53□□□□□ -0.4
SHPRH-202ENST00000367503 ATP6AP1LQ52LC2 224 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 TTC23Q5W5X9 447 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 C16orf46Q6P387 395 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 TTC30AQ86WT1 665 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 ZNF317Q96PQ6 595 aaPredicted RBP12.53□□□□□ -0.4
SHPRH-202ENST00000367503 QKIQ96PU8 341 aaKnown RBP eCLIP12.53□□□□□ -0.42e-37■■■■■ 280.4
SHPRH-202ENST00000367503 NUAK2Q9H093 628 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 CCDC167Q9P0B6 97 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 LNPEPQ9UIQ6 1025 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 NDUFAF1Q9Y375 327 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 PENKP01210 267 aaPredicted RBP12.53□□□□□ -0.4
SHPRH-202ENST00000367503 RXRBP28702 533 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 GP5P40197 560 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 HK2P52789 917 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 PSME3P61289 254 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 RAD51Q06609 339 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 COL9A3Q14050 684 aaPredicted RBP12.53□□□□□ -0.4
SHPRH-202ENST00000367503 SLC1A5Q15758 541 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 ZFP69Q49AA0 526 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 KATNAL2Q8IYT4 538 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 URGCPQ8TCY9 931 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 PROX1Q92786 737 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 FBXO28Q9NVF7 368 aa12.53□□□□□ -0.4
SHPRH-202ENST00000367503 SLC17A7Q9P2U7 560 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms