RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 IDH3AP50213 366 aa13.04□□□□□ -0.32
VAMP1-201ENST00000361716 DPYSL3Q14195 570 aa13.04□□□□□ -0.32
VAMP1-201ENST00000361716 TGFBIQ15582 683 aa13.04□□□□□ -0.32
VAMP1-201ENST00000361716 CYP2A13Q16696 494 aa13.04□□□□□ -0.32
VAMP1-201ENST00000361716 MTX3Q5HYI7 312 aa13.04□□□□□ -0.32
VAMP1-201ENST00000361716 OGFRL1Q5TC84 451 aaPredicted RBP13.04□□□□□ -0.32
VAMP1-201ENST00000361716 JOSD2Q8TAC2 188 aa13.04□□□□□ -0.32
VAMP1-201ENST00000361716 CYGBQ8WWM9 190 aa13.04□□□□□ -0.32
VAMP1-201ENST00000361716 SLC7A3Q8WY07 619 aa13.04□□□□□ -0.32
VAMP1-201ENST00000361716 ATP6V0A1Q93050 837 aa13.04□□□□□ -0.32
VAMP1-201ENST00000361716 DCPSQ96C86 337 aaKnown RBP13.04□□□□□ -0.32
VAMP1-201ENST00000361716 TBC1D22BQ9NU19 505 aa13.04□□□□□ -0.32
VAMP1-201ENST00000361716 ZNF358Q9NW07 568 aa13.04□□□□□ -0.32
VAMP1-201ENST00000361716 AFG3L2Q9Y4W6 797 aa13.04□□□□□ -0.32
VAMP1-201ENST00000361716 SERPINB7O75635 380 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 ZBED1O96006 694 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 FUCA1P04066 466 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 DHRS4L1P0CG22 281 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 CSH1P0DML2 217 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 CSH2P0DML3 217 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 AOC1P19801 751 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 TNFSF9P41273 254 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 ADGRE1Q14246 886 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 PDCD4Q53EL6 469 aaKnown RBP13.03□□□□□ -0.32
VAMP1-201ENST00000361716 PPM1JQ5JR12 505 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 CES3Q6UWW8 571 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 GMCL1P1Q8NEA9 526 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 PLEKHA8Q96JA3 519 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 SLC4A5Q9BY07 1137 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.03□□□□□ -0.32
VAMP1-201ENST00000361716 C6orf203Q9P0P8 240 aaPredicted RBP13.03□□□□□ -0.32
VAMP1-201ENST00000361716 PTPRJQ12913 1337 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 CKMT2P17540 419 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 RCVRNP35243 200 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 NOVP48745 357 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 OGDHQ02218 1023 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 FSCBQ5H9T9 825 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 SLC39A4Q6P5W5 647 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 ADGRG6Q86SQ4 1221 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 LRRC71Q8N4P6 559 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 C7orf31Q8N865 590 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 NAT16Q8N8M0 369 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 NAT8LQ8N9F0 302 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 SNX31Q8N9S9 440 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 SYTL5Q8TDW5 730 aaPredicted RBP13.03□□□□□ -0.32
VAMP1-201ENST00000361716 UNKQ9C0B0 810 aaKnown RBP13.03□□□□□ -0.32
VAMP1-201ENST00000361716 RBM38Q9H0Z9 239 aaKnown RBP13.03□□□□□ -0.32
VAMP1-201ENST00000361716 DAPK2Q9UIK4 370 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 RAB26Q9ULW5 256 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 AURKCQ9UQB9 309 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 MRPL42Q9Y6G3 142 aaKnown RBP13.03□□□□□ -0.32
VAMP1-201ENST00000361716 ZBBXA8MT70 800 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 AKAP10O43572 662 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 OSBPP22059 807 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 BCAP31P51572 246 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 ROR1Q01973 937 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 WASHC5Q12768 1159 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 TRIM72Q6ZMU5 477 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 Q6ZNX1 250 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 SAPCD2Q86UD0 394 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 KBTBD6Q86V97 674 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 LILRA2Q8N149 483 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 VPS50Q96JG6 964 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 AGAP3Q96P47 875 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 NACA2Q9H009 215 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 MRPL46Q9H2W6 279 aaKnown RBP13.03□□□□□ -0.32
VAMP1-201ENST00000361716 EPB41L1Q9H4G0 881 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 C17orf75Q9HAS0 396 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 AVENQ9NQS1 362 aaPredicted RBP13.03□□□□□ -0.32
VAMP1-201ENST00000361716 BCAP29Q9UHQ4 241 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 ZNRF3Q9ULT6 936 aa13.03□□□□□ -0.32
VAMP1-201ENST00000361716 GMNNO75496 209 aa13.02□□□□□ -0.32
VAMP1-201ENST00000361716 MAPK11Q15759 364 aa13.02□□□□□ -0.32
VAMP1-201ENST00000361716 ZNF699Q32M78 642 aa13.02□□□□□ -0.32
VAMP1-201ENST00000361716 THOC7Q6I9Y2 204 aaKnown RBP13.02□□□□□ -0.32
VAMP1-201ENST00000361716 MON1BQ7L1V2 547 aa13.02□□□□□ -0.32
VAMP1-201ENST00000361716 SNX29P2Q8IUI4 249 aa13.02□□□□□ -0.32
VAMP1-201ENST00000361716 LRTOMTQ8WZ04 291 aa13.02□□□□□ -0.32
VAMP1-201ENST00000361716 HEXIM2Q96MH2 286 aaKnown RBP13.02□□□□□ -0.32
VAMP1-201ENST00000361716 PCDHAC1Q9H158 963 aa13.02□□□□□ -0.32
VAMP1-201ENST00000361716 RNF146Q9NTX7 359 aa13.02□□□□□ -0.32
VAMP1-201ENST00000361716 TMX2Q9Y320 296 aa13.02□□□□□ -0.32
VAMP1-201ENST00000361716 RNF103-CHMP3A0A140T963 221 aa13.02□□□□□ -0.33
VAMP1-201ENST00000361716 DENRO43583 198 aaKnown RBP13.02□□□□□ -0.33
VAMP1-201ENST00000361716 ITGAVP06756 1048 aa13.02□□□□□ -0.33
VAMP1-201ENST00000361716 TFE3P19532 575 aaPredicted RBP13.02□□□□□ -0.33
VAMP1-201ENST00000361716 TYK2P29597 1187 aa13.02□□□□□ -0.33
VAMP1-201ENST00000361716 PPARGP37231 505 aaPredicted RBP13.02□□□□□ -0.33
VAMP1-201ENST00000361716 CDK9P50750 372 aaKnown RBP13.02□□□□□ -0.33
VAMP1-201ENST00000361716 SLC18A2Q05940 514 aa13.02□□□□□ -0.33
VAMP1-201ENST00000361716 KLF10Q13118 480 aa13.02□□□□□ -0.33
VAMP1-201ENST00000361716 ZNF362Q5T0B9 420 aaPredicted RBP13.02□□□□□ -0.33
VAMP1-201ENST00000361716 IL23RQ5VWK5 629 aa13.02□□□□□ -0.33
VAMP1-201ENST00000361716 TMEM198Q66K66 360 aa13.02□□□□□ -0.33
VAMP1-201ENST00000361716 MCF2L2Q86YR7 1114 aa13.02□□□□□ -0.33
VAMP1-201ENST00000361716 MAP4K3Q8IVH8 894 aa13.02□□□□□ -0.33
VAMP1-201ENST00000361716 TMCO5AQ8N6Q1 288 aa13.02□□□□□ -0.33
VAMP1-201ENST00000361716 PDCD6IPQ8WUM4 868 aaKnown RBP13.02□□□□□ -0.33
VAMP1-201ENST00000361716 PPP1R14BQ96C90 147 aa13.02□□□□□ -0.33
VAMP1-201ENST00000361716 C1orf21Q9H246 121 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms