RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 LTFP02788 710 aa23.28■■□□□ 1.32
LDB1-201ENST00000361198 ODC1P11926 461 aa23.28■■□□□ 1.32
LDB1-201ENST00000361198 ELNP15502 786 aa23.28■■□□□ 1.32
LDB1-201ENST00000361198 RAB27AP51159 221 aa23.28■■□□□ 1.32
LDB1-201ENST00000361198 FYB2Q5VWT5 728 aa23.28■■□□□ 1.32
LDB1-201ENST00000361198 CD300LGQ6UXG3 332 aa23.28■■□□□ 1.32
LDB1-201ENST00000361198 UNC5AQ6ZN44 842 aa23.28■■□□□ 1.32
LDB1-201ENST00000361198 BHLHA9Q7RTU4 235 aa23.28■■□□□ 1.32
LDB1-201ENST00000361198 CTAGE3PQ8IX95 158 aa23.28■■□□□ 1.32
LDB1-201ENST00000361198 PPM1NQ8N819 430 aa23.28■■□□□ 1.32
LDB1-201ENST00000361198 P2RY11Q96G91 374 aa23.28■■□□□ 1.32
LDB1-201ENST00000361198 SERAC1Q96JX3 654 aa23.28■■□□□ 1.32
LDB1-201ENST00000361198 SLC9A7Q96T83 725 aa23.28■■□□□ 1.32
LDB1-201ENST00000361198 PRDM16Q9HAZ2 1276 aa23.28■■□□□ 1.32
LDB1-201ENST00000361198 SAR1AQ9NR31 198 aa23.28■■□□□ 1.32
LDB1-201ENST00000361198 TRMT13Q9NUP7 481 aaKnown RBP23.28■■□□□ 1.32
LDB1-201ENST00000361198 INPP5FQ9Y2H2 1132 aa23.28■■□□□ 1.32
LDB1-201ENST00000361198 MT-ND3P03897 115 aa23.28■■□□□ 1.32
LDB1-201ENST00000361198 DHRS4L1P0CG22 281 aa23.28■■□□□ 1.32
LDB1-201ENST00000361198 PRKAR2AP13861 404 aaKnown RBP23.28■■□□□ 1.32
LDB1-201ENST00000361198 PRKD1Q15139 912 aaPredicted RBP23.28■■□□□ 1.32
LDB1-201ENST00000361198 SEPT7Q16181 437 aaKnown RBP23.28■■□□□ 1.32
LDB1-201ENST00000361198 COLGALT1Q8NBJ5 622 aa23.28■■□□□ 1.32
LDB1-201ENST00000361198 CEP41Q9BYV8 373 aa23.28■■□□□ 1.32
LDB1-201ENST00000361198 PRDM12Q9H4Q4 367 aa23.28■■□□□ 1.32
LDB1-201ENST00000361198 MAD1L1Q9Y6D9 718 aa23.28■■□□□ 1.32
LDB1-201ENST00000361198 DCLK1O15075 740 aa23.27■■□□□ 1.32
LDB1-201ENST00000361198 PAFAH1B3Q15102 231 aaKnown RBP23.27■■□□□ 1.32
LDB1-201ENST00000361198 SH2D5Q6ZV89 423 aa23.27■■□□□ 1.32
LDB1-201ENST00000361198 SLC26A11Q86WA9 606 aa23.27■■□□□ 1.32
LDB1-201ENST00000361198 LRRC6Q86X45 466 aa23.27■■□□□ 1.32
LDB1-201ENST00000361198 EDEM1Q92611 657 aa23.27■■□□□ 1.32
LDB1-201ENST00000361198 EBNA1BP2Q99848 306 aaKnown RBP23.27■■□□□ 1.32
LDB1-201ENST00000361198 TBC1D10AQ9BXI6 508 aa23.27■■□□□ 1.32
LDB1-201ENST00000361198 CSNK1G1Q9HCP0 422 aa23.27■■□□□ 1.32
LDB1-201ENST00000361198 SMYD2Q9NRG4 433 aa23.27■■□□□ 1.32
LDB1-201ENST00000361198 SLC17A7Q9P2U7 560 aa23.27■■□□□ 1.32
LDB1-201ENST00000361198 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.27■■□□□ 1.32
LDB1-201ENST00000361198 TRDMT1O14717 391 aaKnown RBP23.26■■□□□ 1.31
LDB1-201ENST00000361198 DIAPH2O60879 1101 aa23.26■■□□□ 1.31
LDB1-201ENST00000361198 APOEP02649 317 aa23.26■■□□□ 1.31
LDB1-201ENST00000361198 TROVE2P10155 538 aaKnown RBP eCLIP23.26■■□□□ 1.31
LDB1-201ENST00000361198 PRKCHP24723 683 aa23.26■■□□□ 1.31
LDB1-201ENST00000361198 CTC1Q2NKJ3 1217 aa23.26■■□□□ 1.31
LDB1-201ENST00000361198 CCNYQ8ND76 341 aa23.26■■□□□ 1.31
LDB1-201ENST00000361198 NTAN1Q96AB6 310 aa23.26■■□□□ 1.31
LDB1-201ENST00000361198 ACBD6Q9BR61 282 aa23.26■■□□□ 1.31
LDB1-201ENST00000361198 TLE6Q9H808 572 aa23.26■■□□□ 1.31
LDB1-201ENST00000361198 MANSC1Q9H8J5 431 aa23.26■■□□□ 1.31
LDB1-201ENST00000361198 NPHS2Q9NP85 383 aa23.26■■□□□ 1.31
LDB1-201ENST00000361198 TMLHEQ9NVH6 421 aa23.26■■□□□ 1.31
LDB1-201ENST00000361198 DDIT4Q9NX09 232 aa23.26■■□□□ 1.31
LDB1-201ENST00000361198 KANSL3Q9P2N6 904 aa23.26■■□□□ 1.31
LDB1-201ENST00000361198 LNPEPQ9UIQ6 1025 aa23.26■■□□□ 1.31
LDB1-201ENST00000361198 SF3B1O75533 1304 aaKnown RBP eCLIP23.26■■□□□ 1.31
LDB1-201ENST00000361198 TMEM88BA6NKF7 163 aa23.26■■□□□ 1.31
LDB1-201ENST00000361198 RNF103O00237 685 aa23.26■■□□□ 1.31
LDB1-201ENST00000361198 BDNFP23560 247 aa23.26■■□□□ 1.31
LDB1-201ENST00000361198 ETV4P43268 484 aa23.26■■□□□ 1.31
LDB1-201ENST00000361198 GLUD2P49448 558 aa23.26■■□□□ 1.31
LDB1-201ENST00000361198 SLC18A2Q05940 514 aa23.26■■□□□ 1.31
LDB1-201ENST00000361198 PDK1Q15118 436 aa23.26■■□□□ 1.31
LDB1-201ENST00000361198 FAM171BQ6P995 826 aa23.26■■□□□ 1.31
LDB1-201ENST00000361198 CHSY1Q86X52 802 aa23.26■■□□□ 1.31
LDB1-201ENST00000361198 XAB2Q9HCS7 855 aaKnown RBP23.26■■□□□ 1.31
LDB1-201ENST00000361198 FBXW11Q9UKB1 542 aa23.26■■□□□ 1.31
LDB1-201ENST00000361198 HNRNPCL1O60812 293 aaKnown RBP23.25■■□□□ 1.31
LDB1-201ENST00000361198 ERCC2P18074 760 aa23.25■■□□□ 1.31
LDB1-201ENST00000361198 AIF1P55008 147 aa23.25■■□□□ 1.31
LDB1-201ENST00000361198 SCAPQ12770 1279 aa23.25■■□□□ 1.31
LDB1-201ENST00000361198 SEMA3BQ13214 749 aa23.25■■□□□ 1.31
LDB1-201ENST00000361198 TAF1BQ53T94 588 aaPredicted RBP23.25■■□□□ 1.31
LDB1-201ENST00000361198 PAXIP1Q6ZW49 1069 aaPredicted RBP23.25■■□□□ 1.31
LDB1-201ENST00000361198 CLNKQ7Z7G1 428 aa23.25■■□□□ 1.31
LDB1-201ENST00000361198 PGAP3Q96FM1 320 aaPredicted RBP23.25■■□□□ 1.31
LDB1-201ENST00000361198 TMEM209Q96SK2 561 aa23.25■■□□□ 1.31
LDB1-201ENST00000361198 SEPT10Q9P0V9 454 aa23.25■■□□□ 1.31
LDB1-201ENST00000361198 ZFP69BQ9UJL9 534 aa23.25■■□□□ 1.31
LDB1-201ENST00000361198 RPL26L1Q9UNX3 145 aaKnown RBP23.25■■□□□ 1.31
LDB1-201ENST00000361198 CBX6O95503 412 aa23.25■■□□□ 1.31
LDB1-201ENST00000361198 CYP11A1P05108 521 aa23.25■■□□□ 1.31
LDB1-201ENST00000361198 ITGB1P05556 798 aa23.25■■□□□ 1.31
LDB1-201ENST00000361198 FDFT1P37268 417 aa23.25■■□□□ 1.31
LDB1-201ENST00000361198 NEK3P51956 506 aa23.25■■□□□ 1.31
LDB1-201ENST00000361198 GRIK3Q13003 919 aa23.25■■□□□ 1.31
LDB1-201ENST00000361198 INTS6LQ5JSJ4 861 aaKnown RBP23.25■■□□□ 1.31
LDB1-201ENST00000361198 TRMT10BQ6PF06 316 aaKnown RBP23.25■■□□□ 1.31
LDB1-201ENST00000361198 METTL23Q86XA0 190 aa23.25■■□□□ 1.31
LDB1-201ENST00000361198 PDCD7Q8N8D1 485 aaKnown RBP23.25■■□□□ 1.31
LDB1-201ENST00000361198 FAM13CQ8NE31 585 aa23.25■■□□□ 1.31
LDB1-201ENST00000361198 COLEC11Q9BWP8 271 aa23.25■■□□□ 1.31
LDB1-201ENST00000361198 NOD1Q9Y239 953 aa23.25■■□□□ 1.31
LDB1-201ENST00000361198 F8W810 466 aa23.24■■□□□ 1.31
LDB1-201ENST00000361198 CST5P28325 142 aaPredicted RBP23.24■■□□□ 1.31
LDB1-201ENST00000361198 CLNS1AP54105 237 aaKnown RBP23.24■■□□□ 1.31
LDB1-201ENST00000361198 WASHC5Q12768 1159 aa23.24■■□□□ 1.31
LDB1-201ENST00000361198 TUSC3Q13454 348 aa23.24■■□□□ 1.31
LDB1-201ENST00000361198 ITGA7Q13683 1181 aa23.24■■□□□ 1.31
LDB1-201ENST00000361198 CRYMQ14894 314 aa23.24■■□□□ 1.31
LDB1-201ENST00000361198 LRRTM3Q86VH5 581 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms