RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 CNTFP26441 200 aa12.79□□□□□ -0.36
UBA3-202ENST00000361055 CCNHP51946 323 aaPredicted RBP12.79□□□□□ -0.36
UBA3-202ENST00000361055 LPIN1Q14693 890 aa12.79□□□□□ -0.36
UBA3-202ENST00000361055 CHI3L2Q15782 390 aa12.79□□□□□ -0.36
UBA3-202ENST00000361055 TEX44Q53QW1 395 aa12.79□□□□□ -0.36
UBA3-202ENST00000361055 RAB6CQ53S08 254 aa12.79□□□□□ -0.36
UBA3-202ENST00000361055 SYCP2LQ5T4T6 812 aa12.79□□□□□ -0.36
UBA3-202ENST00000361055 UNC5AQ6ZN44 842 aa12.79□□□□□ -0.36
UBA3-202ENST00000361055 LRRC8DQ7L1W4 858 aa12.79□□□□□ -0.36
UBA3-202ENST00000361055 ARCQ7LC44 396 aa12.79□□□□□ -0.36
UBA3-202ENST00000361055 NET1Q7Z628 596 aaPredicted RBP12.79□□□□□ -0.36
UBA3-202ENST00000361055 ALYREFQ86V81 257 aaKnown RBP12.79□□□□□ -0.36
UBA3-202ENST00000361055 PDCD7Q8N8D1 485 aaKnown RBP12.79□□□□□ -0.36
UBA3-202ENST00000361055 RAB6CQ9H0N0 254 aa12.79□□□□□ -0.36
UBA3-202ENST00000361055 VCXQ9H320 206 aa12.79□□□□□ -0.36
UBA3-202ENST00000361055 AGO3Q9H9G7 860 aaKnown RBP12.79□□□□□ -0.36
UBA3-202ENST00000361055 SMYD2Q9NRG4 433 aa12.79□□□□□ -0.36
UBA3-202ENST00000361055 TAGLN3Q9UI15 199 aa12.79□□□□□ -0.36
UBA3-202ENST00000361055 HEY1Q9Y5J3 304 aa12.79□□□□□ -0.36
UBA3-202ENST00000361055 MDM4O15151 490 aa12.78□□□□□ -0.36
UBA3-202ENST00000361055 APRTP07741 180 aa12.78□□□□□ -0.36
UBA3-202ENST00000361055 PFKMP08237 780 aa12.78□□□□□ -0.36
UBA3-202ENST00000361055 PDHA1P08559 390 aa12.78□□□□□ -0.36
UBA3-202ENST00000361055 TPSB2P20231 275 aa12.78□□□□□ -0.36
UBA3-202ENST00000361055 TLE2Q04725 743 aa12.78□□□□□ -0.36
UBA3-202ENST00000361055 WASHC5Q12768 1159 aa12.78□□□□□ -0.36
UBA3-202ENST00000361055 TPSAB1Q15661 275 aa12.78□□□□□ -0.36
UBA3-202ENST00000361055 CDKL3Q8IVW4 592 aaPredicted RBP12.78□□□□□ -0.36
UBA3-202ENST00000361055 ARID3BQ8IVW6 561 aaPredicted RBP12.78□□□□□ -0.36
UBA3-202ENST00000361055 GSDMBQ8TAX9 411 aa12.78□□□□□ -0.36
UBA3-202ENST00000361055 ACAP3Q96P50 834 aa12.78□□□□□ -0.36
UBA3-202ENST00000361055 SIKE1Q9BRV8 207 aa12.78□□□□□ -0.36
UBA3-202ENST00000361055 ZNF670Q9BS34 389 aa12.78□□□□□ -0.36
UBA3-202ENST00000361055 SLC13A1Q9BZW2 595 aa12.78□□□□□ -0.36
UBA3-202ENST00000361055 C1orf21Q9H246 121 aa12.78□□□□□ -0.36
UBA3-202ENST00000361055 THAP1Q9NVV9 213 aa12.78□□□□□ -0.36
UBA3-202ENST00000361055 ARMCX1Q9P291 453 aa12.78□□□□□ -0.36
UBA3-202ENST00000361055 PPARGC1AQ9UBK2 798 aaKnown RBP12.78□□□□□ -0.36
UBA3-202ENST00000361055 DNAJB4Q9UDY4 337 aa12.78□□□□□ -0.36
UBA3-202ENST00000361055 PADI3Q9ULW8 664 aa12.78□□□□□ -0.36
UBA3-202ENST00000361055 SPECC1L-ADORA2AF8WAN1 911 aa12.77□□□□□ -0.36
UBA3-202ENST00000361055 TM7SF2O76062 418 aa12.77□□□□□ -0.36
UBA3-202ENST00000361055 CHRM1P11229 460 aaPredicted RBP12.77□□□□□ -0.36
UBA3-202ENST00000361055 ZFXP17010 805 aaPredicted RBP12.77□□□□□ -0.36
UBA3-202ENST00000361055 DESP17661 470 aa12.77□□□□□ -0.36
UBA3-202ENST00000361055 CYP3A5P20815 502 aa12.77□□□□□ -0.36
UBA3-202ENST00000361055 CD52P31358 61 aa12.77□□□□□ -0.36
UBA3-202ENST00000361055 NDST1P52848 882 aa12.77□□□□□ -0.36
UBA3-202ENST00000361055 SESN3P58005 492 aa12.77□□□□□ -0.36
UBA3-202ENST00000361055 RBP5P82980 135 aa12.77□□□□□ -0.36
UBA3-202ENST00000361055 STX3Q13277 289 aa12.77□□□□□ -0.36
UBA3-202ENST00000361055 THOC5Q13769 683 aaKnown RBP12.77□□□□□ -0.36
UBA3-202ENST00000361055 DNAL1Q4LDG9 190 aa12.77□□□□□ -0.36
UBA3-202ENST00000361055 SCYL2Q6P3W7 929 aa12.77□□□□□ -0.36
UBA3-202ENST00000361055 TMEM154Q6P9G4 183 aa12.77□□□□□ -0.36
UBA3-202ENST00000361055 KYAT3Q6YP21 454 aaKnown RBP12.77□□□□□ -0.36
UBA3-202ENST00000361055 TREML1Q86YW5 311 aa12.77□□□□□ -0.36
UBA3-202ENST00000361055 SCUBE1Q8IWY4 988 aa12.77□□□□□ -0.36
UBA3-202ENST00000361055 NDUFAF2Q8N183 169 aa12.77□□□□□ -0.36
UBA3-202ENST00000361055 SYT15Q9BQS2 421 aa12.77□□□□□ -0.36
UBA3-202ENST00000361055 MECRQ9BV79 373 aa12.77□□□□□ -0.36
UBA3-202ENST00000361055 CCDC106Q9BWC9 280 aa12.77□□□□□ -0.36
UBA3-202ENST00000361055 NT5C1AQ9BXI3 368 aa12.77□□□□□ -0.36
UBA3-202ENST00000361055 EIF2AQ9BY44 585 aaKnown RBP12.77□□□□□ -0.36
UBA3-202ENST00000361055 XAB2Q9HCS7 855 aaKnown RBP12.77□□□□□ -0.36
UBA3-202ENST00000361055 MOCS1Q9NZB8 636 aa12.77□□□□□ -0.36
UBA3-202ENST00000361055 ANGPTL2Q9UKU9 493 aa12.77□□□□□ -0.36
UBA3-202ENST00000361055 PLA2G4CQ9UP65 541 aa12.77□□□□□ -0.36
UBA3-202ENST00000361055 ATP11BQ9Y2G3 1177 aa12.77□□□□□ -0.36
UBA3-202ENST00000361055 PCDHA11Q9Y5I1 949 aa12.77□□□□□ -0.36
UBA3-202ENST00000361055 TRIP11Q15643 1979 aa12.77□□□□□ -0.36
UBA3-202ENST00000361055 RALGAPA2Q2PPJ7 1873 aa12.77□□□□□ -0.36
UBA3-202ENST00000361055 HMX2A2RU54 273 aa12.77□□□□□ -0.37
UBA3-202ENST00000361055 MAP3K7O43318 606 aa12.77□□□□□ -0.37
UBA3-202ENST00000361055 SERPINA6P08185 405 aa12.77□□□□□ -0.37
UBA3-202ENST00000361055 GRM5P41594 1212 aa12.77□□□□□ -0.37
UBA3-202ENST00000361055 NR2C2P49116 596 aa12.77□□□□□ -0.37
UBA3-202ENST00000361055 SNX16P57768 344 aa12.77□□□□□ -0.37
UBA3-202ENST00000361055 SLC6A3Q01959 620 aa12.77□□□□□ -0.37
UBA3-202ENST00000361055 LRRC26Q2I0M4 334 aa12.77□□□□□ -0.37
UBA3-202ENST00000361055 TRMT5Q32P41 509 aaKnown RBP12.77□□□□□ -0.37
UBA3-202ENST00000361055 SLC10A6Q3KNW5 377 aa12.77□□□□□ -0.37
UBA3-202ENST00000361055 C6orf163Q5TEZ5 329 aa12.77□□□□□ -0.37
UBA3-202ENST00000361055 CES4AQ5XG92 561 aa12.77□□□□□ -0.37
UBA3-202ENST00000361055 TWF2Q6IBS0 349 aaKnown RBP12.77□□□□□ -0.37
UBA3-202ENST00000361055 TMEM110Q86TL2 294 aa12.77□□□□□ -0.37
UBA3-202ENST00000361055 RBM15BQ8NDT2 890 aaKnown RBP12.77□□□□□ -0.37
UBA3-202ENST00000361055 STKLD1Q8NE28 680 aa12.77□□□□□ -0.37
UBA3-202ENST00000361055 ACMSDQ8TDX5 336 aa12.77□□□□□ -0.37
UBA3-202ENST00000361055 KHSRPQ92945 711 aaKnown RBP eCLIP12.77□□□□□ -0.375e-7■■■□□ 17.7
UBA3-202ENST00000361055 SLC4A5Q9BY07 1137 aa12.77□□□□□ -0.37
UBA3-202ENST00000361055 HIPK3Q9H422 1215 aa12.77□□□□□ -0.37
UBA3-202ENST00000361055 TSPAN16Q9UKR8 245 aa12.77□□□□□ -0.37
UBA3-202ENST00000361055 ITGA11Q9UKX5 1188 aa12.77□□□□□ -0.37
UBA3-202ENST00000361055 UGT1A9O60656 530 aa12.76□□□□□ -0.37
UBA3-202ENST00000361055 ENO1P06733 434 aaKnown RBP12.76□□□□□ -0.37
UBA3-202ENST00000361055 SETSIPP0DME0 302 aa12.76□□□□□ -0.37
UBA3-202ENST00000361055 CSH1P0DML2 217 aa12.76□□□□□ -0.37
UBA3-202ENST00000361055 CSH2P0DML3 217 aa12.76□□□□□ -0.37
UBA3-202ENST00000361055 SDC4P31431 198 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms