RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 CASP8Q14790 479 aa23.91■■□□□ 1.42
SDF4-202ENST00000360001 HDXQ7Z353 690 aa23.91■■□□□ 1.42
SDF4-202ENST00000360001 ATP6V0D2Q8N8Y2 350 aa23.91■■□□□ 1.42
SDF4-202ENST00000360001 BTN2A3PQ96KV6 586 aa23.91■■□□□ 1.42
SDF4-202ENST00000360001 FMO2Q99518 471 aa23.91■■□□□ 1.42
SDF4-202ENST00000360001 FAM129AQ9BZQ8 928 aa23.91■■□□□ 1.42
SDF4-202ENST00000360001 IL21Q9HBE4 155 aa23.91■■□□□ 1.42
SDF4-202ENST00000360001 MTCL1Q9Y4B5 1905 aaKnown RBP23.91■■□□□ 1.42
SDF4-202ENST00000360001 F11P03951 625 aa23.91■■□□□ 1.42
SDF4-202ENST00000360001 RBL1P28749 1068 aa23.91■■□□□ 1.42
SDF4-202ENST00000360001 NRLP54845 237 aa23.91■■□□□ 1.42
SDF4-202ENST00000360001 ERVK-21P61565 698 aa23.91■■□□□ 1.42
SDF4-202ENST00000360001 SLC45A4Q5BKX6 768 aa23.91■■□□□ 1.42
SDF4-202ENST00000360001 BZW1Q7L1Q6 419 aaKnown RBP23.91■■□□□ 1.42
SDF4-202ENST00000360001 C14orf80Q86SX3 495 aa23.91■■□□□ 1.42
SDF4-202ENST00000360001 NPWQ8N729 165 aa23.91■■□□□ 1.42
SDF4-202ENST00000360001 NETO2Q8NC67 525 aa23.91■■□□□ 1.42
SDF4-202ENST00000360001 MICAL1Q8TDZ2 1067 aa23.91■■□□□ 1.42
SDF4-202ENST00000360001 RTP4Q96DX8 246 aa23.91■■□□□ 1.42
SDF4-202ENST00000360001 SAMD11Q96NU1 681 aa23.91■■□□□ 1.42
SDF4-202ENST00000360001 QKIQ96PU8 341 aaKnown RBP eCLIP23.91■■□□□ 1.42
SDF4-202ENST00000360001 OBSL1O75147 1896 aa23.9■■□□□ 1.42
SDF4-202ENST00000360001 MYO7AQ13402 2215 aa23.9■■□□□ 1.42
SDF4-202ENST00000360001 CFAP69A5D8W1 941 aa23.9■■□□□ 1.42
SDF4-202ENST00000360001 E9PAM4 449 aa23.9■■□□□ 1.42
SDF4-202ENST00000360001 MAP2K7O14733 419 aa23.9■■□□□ 1.42
SDF4-202ENST00000360001 ATP8B1O43520 1251 aa23.9■■□□□ 1.42
SDF4-202ENST00000360001 OAS1P00973 400 aaKnown RBP23.9■■□□□ 1.42
SDF4-202ENST00000360001 LRG1P02750 347 aa23.9■■□□□ 1.42
SDF4-202ENST00000360001 GPS1Q13098 491 aa23.9■■□□□ 1.42
SDF4-202ENST00000360001 P3H1Q32P28 736 aa23.9■■□□□ 1.42
SDF4-202ENST00000360001 MS4A13Q5J8X5 152 aa23.9■■□□□ 1.42
SDF4-202ENST00000360001 CDKL3Q8IVW4 592 aaPredicted RBP23.9■■□□□ 1.42
SDF4-202ENST00000360001 TP53INP2Q8IXH6 220 aa23.9■■□□□ 1.42
SDF4-202ENST00000360001 SLC12A6Q9UHW9 1150 aa23.9■■□□□ 1.42
SDF4-202ENST00000360001 C2orf78A6NCI8 922 aa23.89■■□□□ 1.42
SDF4-202ENST00000360001 RPL22P35268 128 aaKnown RBP23.89■■□□□ 1.42
SDF4-202ENST00000360001 PBX2P40425 430 aa23.89■■□□□ 1.42
SDF4-202ENST00000360001 KCNQ1P51787 676 aa23.89■■□□□ 1.42
SDF4-202ENST00000360001 ITGA8P53708 1063 aa23.89■■□□□ 1.42
SDF4-202ENST00000360001 RWDD4Q6NW29 188 aaKnown RBP23.89■■□□□ 1.42
SDF4-202ENST00000360001 RHBDF2Q6PJF5 856 aa23.89■■□□□ 1.42
SDF4-202ENST00000360001 ZNF683Q8IZ20 524 aa23.89■■□□□ 1.42
SDF4-202ENST00000360001 TBC1D31Q96DN5 1066 aa23.89■■□□□ 1.42
SDF4-202ENST00000360001 LRRC3Q9BY71 257 aa23.89■■□□□ 1.42
SDF4-202ENST00000360001 NACA2Q9H009 215 aa23.89■■□□□ 1.42
SDF4-202ENST00000360001 RNF38Q9H0F5 515 aa23.89■■□□□ 1.42
SDF4-202ENST00000360001 ADAM7Q9H2U9 754 aa23.89■■□□□ 1.42
SDF4-202ENST00000360001 KCNN4O15554 427 aa23.89■■□□□ 1.41
SDF4-202ENST00000360001 LPXNO60711 386 aa23.89■■□□□ 1.41
SDF4-202ENST00000360001 IZUMO3Q5VZ72 239 aa23.89■■□□□ 1.41
SDF4-202ENST00000360001 TMC8Q8IU68 726 aa23.89■■□□□ 1.41
SDF4-202ENST00000360001 HACD1B0YJ81 288 aa23.88■■□□□ 1.41
SDF4-202ENST00000360001 DNALI1O14645 258 aaPredicted RBP23.88■■□□□ 1.41
SDF4-202ENST00000360001 NUGGCQ68CJ6 796 aa23.88■■□□□ 1.41
SDF4-202ENST00000360001 PDZD4Q76G19 769 aaPredicted RBP23.88■■□□□ 1.41
SDF4-202ENST00000360001 BBOF1Q8ND07 529 aa23.88■■□□□ 1.41
SDF4-202ENST00000360001 LGMNQ99538 433 aa23.88■■□□□ 1.41
SDF4-202ENST00000360001 ANAPC5Q9UJX4 755 aa23.88■■□□□ 1.41
SDF4-202ENST00000360001 RAD54BQ9Y620 910 aa23.88■■□□□ 1.41
SDF4-202ENST00000360001 H3BNC9 293 aa23.87■■□□□ 1.41
SDF4-202ENST00000360001 FGF10O15520 208 aaPredicted RBP23.87■■□□□ 1.41
SDF4-202ENST00000360001 AUHQ13825 339 aaKnown RBP23.87■■□□□ 1.41
SDF4-202ENST00000360001 PDK1Q15118 436 aa23.87■■□□□ 1.41
SDF4-202ENST00000360001 PABPC1LQ4VXU2 614 aaKnown RBP23.87■■□□□ 1.41
SDF4-202ENST00000360001 HS6ST3Q8IZP7 471 aa23.87■■□□□ 1.41
SDF4-202ENST00000360001 MREGQ8N565 214 aa23.87■■□□□ 1.41
SDF4-202ENST00000360001 TSEN2Q8NCE0 465 aaKnown RBP23.87■■□□□ 1.41
SDF4-202ENST00000360001 SLC22A17Q8WUG5 538 aa23.87■■□□□ 1.41
SDF4-202ENST00000360001 TFB1MQ8WVM0 346 aaKnown RBP23.87■■□□□ 1.41
SDF4-202ENST00000360001 KLC2Q9H0B6 622 aa23.87■■□□□ 1.41
SDF4-202ENST00000360001 PRDM12Q9H4Q4 367 aa23.87■■□□□ 1.41
SDF4-202ENST00000360001 VAV1P15498 845 aa23.87■■□□□ 1.41
SDF4-202ENST00000360001 HSPA9P38646 679 aaKnown RBP23.87■■□□□ 1.41
SDF4-202ENST00000360001 CAV1Q03135 178 aa23.87■■□□□ 1.41
SDF4-202ENST00000360001 GPM6BQ13491 265 aa23.87■■□□□ 1.41
SDF4-202ENST00000360001 PRKD1Q15139 912 aaPredicted RBP23.87■■□□□ 1.41
SDF4-202ENST00000360001 HIBCHQ6NVY1 386 aaPredicted RBP23.87■■□□□ 1.41
SDF4-202ENST00000360001 LRRC45Q96CN5 670 aa23.87■■□□□ 1.41
SDF4-202ENST00000360001 PRMT1Q99873 361 aaKnown RBP23.87■■□□□ 1.41
SDF4-202ENST00000360001 CATSPERBQ9H7T0 1116 aa23.87■■□□□ 1.41
SDF4-202ENST00000360001 MTRF1LQ9UGC7 380 aaKnown RBP23.87■■□□□ 1.41
SDF4-202ENST00000360001 VANGL2Q9ULK5 521 aa23.87■■□□□ 1.41
SDF4-202ENST00000360001 SERPINB6P35237 376 aa23.86■■□□□ 1.41
SDF4-202ENST00000360001 COG7P83436 770 aa23.86■■□□□ 1.41
SDF4-202ENST00000360001 FAM182AQ5T1J6 154 aa23.86■■□□□ 1.41
SDF4-202ENST00000360001 GAREM2Q75VX8 874 aa23.86■■□□□ 1.41
SDF4-202ENST00000360001 TMC3Q7Z5M5 1100 aa23.86■■□□□ 1.41
SDF4-202ENST00000360001 GDF15Q99988 308 aa23.86■■□□□ 1.41
SDF4-202ENST00000360001 PBX4Q9BYU1 374 aa23.86■■□□□ 1.41
SDF4-202ENST00000360001 TPX2Q9ULW0 747 aaKnown RBP23.86■■□□□ 1.41
SDF4-202ENST00000360001 NUP205Q92621 2012 aa23.86■■□□□ 1.41
SDF4-202ENST00000360001 DOCK4Q8N1I0 1966 aa23.86■■□□□ 1.41
SDF4-202ENST00000360001 DENND4CQ5VZ89 1909 aa23.86■■□□□ 1.41
SDF4-202ENST00000360001 LAMA3Q16787 3333 aa23.85■■□□□ 1.41
SDF4-202ENST00000360001 PPP1R12AO14974 1030 aaPredicted RBP23.85■■□□□ 1.41
SDF4-202ENST00000360001 CLASP2O75122 1294 aaKnown RBP23.85■■□□□ 1.41
SDF4-202ENST00000360001 C1RP00736 705 aa23.85■■□□□ 1.41
SDF4-202ENST00000360001 GABRR2P28476 465 aa23.85■■□□□ 1.41
SDF4-202ENST00000360001 MTA1Q13330 715 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms