RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 KCNA5P22460 613 aa14.31□□□□□ -0.12
PDLIM5-203ENST00000359265 PPP3CCP48454 512 aa14.31□□□□□ -0.12
PDLIM5-203ENST00000359265 HCAR3P49019 387 aa14.31□□□□□ -0.12
PDLIM5-203ENST00000359265 TBX4P57082 545 aa14.31□□□□□ -0.12
PDLIM5-203ENST00000359265 EFEMP1Q12805 493 aa14.31□□□□□ -0.12
PDLIM5-203ENST00000359265 SEMA3BQ13214 749 aa14.31□□□□□ -0.12
PDLIM5-203ENST00000359265 MTA1Q13330 715 aa14.31□□□□□ -0.12
PDLIM5-203ENST00000359265 HLTFQ14527 1009 aaKnown RBP eCLIP14.31□□□□□ -0.12
PDLIM5-203ENST00000359265 OASLQ15646 514 aaKnown RBP14.31□□□□□ -0.12
PDLIM5-203ENST00000359265 TRIP4Q15650 581 aaPredicted RBP14.31□□□□□ -0.12
PDLIM5-203ENST00000359265 SNX30Q5VWJ9 437 aa14.31□□□□□ -0.12
PDLIM5-203ENST00000359265 DUPD1Q68J44 220 aa14.31□□□□□ -0.12
PDLIM5-203ENST00000359265 PTCRAQ6ISU1 281 aaPredicted RBP14.31□□□□□ -0.12
PDLIM5-203ENST00000359265 C1orf228Q6PIY5 440 aa14.31□□□□□ -0.12
PDLIM5-203ENST00000359265 GSTA5Q7RTV2 222 aa14.31□□□□□ -0.12
PDLIM5-203ENST00000359265 PLD5Q8N7P1 536 aa14.31□□□□□ -0.12
PDLIM5-203ENST00000359265 CCHCR1Q8TD31 782 aa14.31□□□□□ -0.12
PDLIM5-203ENST00000359265 IFT81Q8WYA0 676 aa14.31□□□□□ -0.12
PDLIM5-203ENST00000359265 PPP2R3CQ969Q6 453 aa14.31□□□□□ -0.12
PDLIM5-203ENST00000359265 HAPLN3Q96S86 360 aa14.31□□□□□ -0.12
PDLIM5-203ENST00000359265 HINFPQ9BQA5 517 aa14.31□□□□□ -0.12
PDLIM5-203ENST00000359265 TRIM31Q9BZY9 425 aa14.31□□□□□ -0.12
PDLIM5-203ENST00000359265 OSBPL2Q9H1P3 480 aa14.31□□□□□ -0.12
PDLIM5-203ENST00000359265 TRPM5Q9NZQ8 1165 aa14.31□□□□□ -0.12
PDLIM5-203ENST00000359265 MARCH2Q9P0N8 246 aa14.31□□□□□ -0.12
PDLIM5-203ENST00000359265 ASIC3Q9UHC3 531 aa14.31□□□□□ -0.12
PDLIM5-203ENST00000359265 ASB3Q9Y575 518 aa14.31□□□□□ -0.12
PDLIM5-203ENST00000359265 ZFHX2Q9C0A1 2572 aaPredicted RBP14.31□□□□□ -0.12
PDLIM5-203ENST00000359265 TECTAO75443 2155 aa14.31□□□□□ -0.12
PDLIM5-203ENST00000359265 PTPRZ1P23471 2315 aaPredicted RBP14.3□□□□□ -0.12
PDLIM5-203ENST00000359265 CFAP69A5D8W1 941 aa14.3□□□□□ -0.12
PDLIM5-203ENST00000359265 SGK1O00141 431 aa14.3□□□□□ -0.12
PDLIM5-203ENST00000359265 DAPK3O43293 454 aa14.3□□□□□ -0.12
PDLIM5-203ENST00000359265 CSPG5O95196 566 aa14.3□□□□□ -0.12
PDLIM5-203ENST00000359265 LRG1P02750 347 aa14.3□□□□□ -0.12
PDLIM5-203ENST00000359265 RBP3P10745 1247 aa14.3□□□□□ -0.12
PDLIM5-203ENST00000359265 AMPD1P23109 780 aa14.3□□□□□ -0.12
PDLIM5-203ENST00000359265 HTR7P34969 479 aa14.3□□□□□ -0.12
PDLIM5-203ENST00000359265 NR2C2P49116 596 aa14.3□□□□□ -0.12
PDLIM5-203ENST00000359265 CARSP49589 748 aaKnown RBP14.3□□□□□ -0.12
PDLIM5-203ENST00000359265 TUBP50607 506 aa14.3□□□□□ -0.12
PDLIM5-203ENST00000359265 KPNA1P52294 538 aaPredicted RBP14.3□□□□□ -0.12
PDLIM5-203ENST00000359265 PTPN5P54829 565 aa14.3□□□□□ -0.12
PDLIM5-203ENST00000359265 DRG2P55039 364 aaKnown RBP14.3□□□□□ -0.12
PDLIM5-203ENST00000359265 DPYSQ14117 519 aa14.3□□□□□ -0.12
PDLIM5-203ENST00000359265 EMBQ6PCB8 327 aa14.3□□□□□ -0.12
PDLIM5-203ENST00000359265 NPNTQ6UXI9 565 aa14.3□□□□□ -0.12
PDLIM5-203ENST00000359265 RFX8Q6ZV50 586 aa14.3□□□□□ -0.12
PDLIM5-203ENST00000359265 PDZD4Q76G19 769 aaPredicted RBP14.3□□□□□ -0.12
PDLIM5-203ENST00000359265 GSPT2Q8IYD1 628 aaKnown RBP14.3□□□□□ -0.12
PDLIM5-203ENST00000359265 ELMOD1Q8N336 334 aa14.3□□□□□ -0.12
PDLIM5-203ENST00000359265 ALLCQ8N6M5 410 aa14.3□□□□□ -0.12
PDLIM5-203ENST00000359265 ATP6V0D2Q8N8Y2 350 aa14.3□□□□□ -0.12
PDLIM5-203ENST00000359265 CCDC89Q8N998 374 aa14.3□□□□□ -0.12
PDLIM5-203ENST00000359265 PSMG2Q969U7 264 aa14.3□□□□□ -0.12
PDLIM5-203ENST00000359265 SLC39A13Q96H72 371 aa14.3□□□□□ -0.12
PDLIM5-203ENST00000359265 FCRL2Q96LA5 508 aaPredicted RBP14.3□□□□□ -0.12
PDLIM5-203ENST00000359265 MAGEB5Q9BZ81 275 aa14.3□□□□□ -0.12
PDLIM5-203ENST00000359265 FAM129AQ9BZQ8 928 aa14.3□□□□□ -0.12
PDLIM5-203ENST00000359265 ANLNQ9NQW6 1124 aa14.3□□□□□ -0.12
PDLIM5-203ENST00000359265 ARHGEF4Q9NR80 690 aa14.3□□□□□ -0.12
PDLIM5-203ENST00000359265 SAE1Q9UBE0 346 aaPredicted RBP14.3□□□□□ -0.12
PDLIM5-203ENST00000359265 SLC12A6Q9UHW9 1150 aa14.3□□□□□ -0.12
PDLIM5-203ENST00000359265 HBS1LQ9Y450 684 aaKnown RBP14.3□□□□□ -0.12
PDLIM5-203ENST00000359265 SLC12A8A0AV02 714 aa14.29□□□□□ -0.12
PDLIM5-203ENST00000359265 H7C0C1 242 aa14.29□□□□□ -0.12
PDLIM5-203ENST00000359265 I6L893 689 aaPredicted RBP14.29□□□□□ -0.12
PDLIM5-203ENST00000359265 PAGE1O75459 146 aa14.29□□□□□ -0.12
PDLIM5-203ENST00000359265 KRT14P02533 472 aa14.29□□□□□ -0.12
PDLIM5-203ENST00000359265 MYBL2P10244 700 aa14.29□□□□□ -0.12
PDLIM5-203ENST00000359265 IRS1P35568 1242 aa14.29□□□□□ -0.12
PDLIM5-203ENST00000359265 ATP5C1P36542 298 aaKnown RBP14.29□□□□□ -0.12
PDLIM5-203ENST00000359265 ATP5OP48047 213 aa14.29□□□□□ -0.12
PDLIM5-203ENST00000359265 CLCN4P51793 760 aa14.29□□□□□ -0.12
PDLIM5-203ENST00000359265 RING1Q06587 406 aa14.29□□□□□ -0.12
PDLIM5-203ENST00000359265 XRCC4Q13426 336 aa14.29□□□□□ -0.12
PDLIM5-203ENST00000359265 CAMK1Q14012 370 aa14.29□□□□□ -0.12
PDLIM5-203ENST00000359265 HECTD3Q5T447 861 aa14.29□□□□□ -0.12
PDLIM5-203ENST00000359265 NCBP2-AS2Q69YL0 99 aa14.29□□□□□ -0.12
PDLIM5-203ENST00000359265 LILRA6Q6PI73 481 aa14.29□□□□□ -0.12
PDLIM5-203ENST00000359265 KLHDC10Q6PID8 442 aa14.29□□□□□ -0.12
PDLIM5-203ENST00000359265 BZW1Q7L1Q6 419 aaKnown RBP14.29□□□□□ -0.12
PDLIM5-203ENST00000359265 DNAJB7Q7Z6W7 309 aaPredicted RBP14.29□□□□□ -0.12
PDLIM5-203ENST00000359265 CDKL3Q8IVW4 592 aaPredicted RBP14.29□□□□□ -0.12
PDLIM5-203ENST00000359265 KREMEN2Q8NCW0 462 aa14.29□□□□□ -0.12
PDLIM5-203ENST00000359265 BBOF1Q8ND07 529 aa14.29□□□□□ -0.12
PDLIM5-203ENST00000359265 AENQ8WTP8 325 aaKnown RBP14.29□□□□□ -0.12
PDLIM5-203ENST00000359265 RSAD2Q8WXG1 361 aa14.29□□□□□ -0.12
PDLIM5-203ENST00000359265 SNF8Q96H20 258 aa14.29□□□□□ -0.12
PDLIM5-203ENST00000359265 NACA2Q9H009 215 aa14.29□□□□□ -0.12
PDLIM5-203ENST00000359265 PCDH9Q9HC56 1237 aa14.29□□□□□ -0.12
PDLIM5-203ENST00000359265 OR12D3Q9UGF7 316 aa14.29□□□□□ -0.12
PDLIM5-203ENST00000359265 DNMT3LQ9UJW3 386 aa14.29□□□□□ -0.12
PDLIM5-203ENST00000359265 NFU1Q9UMS0 254 aa14.29□□□□□ -0.12
PDLIM5-203ENST00000359265 SNX24Q9Y343 169 aa14.29□□□□□ -0.12
PDLIM5-203ENST00000359265 HEY1Q9Y5J3 304 aa14.29□□□□□ -0.12
PDLIM5-203ENST00000359265 CACNA1BQ00975 2339 aa14.29□□□□□ -0.12
PDLIM5-203ENST00000359265 ZNF840PA6NDX5 716 aa14.28□□□□□ -0.12
PDLIM5-203ENST00000359265 C19orf67A6NJJ6 358 aa14.28□□□□□ -0.12
PDLIM5-203ENST00000359265 KCNU1A8MYU2 1149 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms